Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g1843 ATGCCCCCAAGAAACCTCCTCGTTTTCTCCTTTTTCCTCATTCTCTTCCCCCCACCAAAGACACAGAGTATCGGCTTCGATTTCACTTCTTTCAACATCAGAAACCTCACTCTCCTCGGCGATTCCCATCTCCGCGATGGCGTTATTGGCCTCACCAAAGAGCTCGGAGTCCCTTCCTCAAGCGCCGGCGCCGTAATTTACAACAAACCCATCGGATTTTACGACGCCGATTCCAACACCACCGCCTCTTTCTCCACATCATTCTCTTTCTCCATCACCAACATTAACCCCTCTTCCTTTGGTGATGGTCTTTCCTTCTTCCTCTCCCCCGATAATCAGACCCTTGGCAGCCCCGGCGGGTATTTGGGCCTCGTCAATTCATCCCAATTGACCAAGAACAAGTTTGTGGCCGTTGAATTTGATACACGCCTCGATTCTTACTTCAACGATCCTAATGCCCATCATGTTGGTTTGGATATTGAGAGCTTGATTTCGATCAAGACGGCCAACCCCTTTTCTCAAGGGGTCAATCTCAAGAGTGGGAACTTGATTACGGCTTGGATTGAGTACAAGAATGAGGATTGTAGGTTGAAGGTTTTCTTGAGTTATTCTGGTTTGAAGCCTTCAAAGGCTCTTCTCGATGTTGATGTCGATCTTTCGAGCTATCTTAAGGAGGTTATGTATGTCGGGTTTTCGGGTTCAACTGAAGGGAGTACTGAGCTTCATGTAATTGATAGTTGGAGCTTTTATACTTCTGGGTTTGTTCCTGCTAGGCCTAGATTTAATCCTCATAACGTTTCTGATAGCTCTGTGATTGTTCATCCTAATATTTCTATATCTGATCCTGGCAATGGACATCATAGTAGGCTCGGGTTGGGACTCGGCATCGCTGGACCGACCTTCTTTTGTGCTGTAATTGCTGTGTTTGGTTTCTTTTCGCTTAGGAAATGGAGGAAGATTAGGACTCAGAAGAGCTTTAAGGCTGAGCTTTTGACAGGTCCTAGAGAGTTTAGCTACAGAGAACTTAAGACGGCCACAAAAGGGTTTCACTCCAGCAGGATCATTGGCAATGGAGCTTTTGGGACTGTTTATAAAGCTTTTTTCATCTCGTCAGGAACTATTTCGGCAGTCAAAAGATCAAAGCATTCCCACGAAGGGAAGACCGAGTTCTTGGCTGAGTTGTCGATCATAGCTCGGTTGAGGCACAAAAATTTGGTTCAGCTCCAAGGTTGGTGTGTCGAGAAGGGCGAACTGCTTCTTGTTTACGACTTTATGCCAAACGGGAGCCTTGATAGACTGCTTTACCAGGAATCAGGAGAAGCTAGCTTGTTAAACTGGTCTCACAGATACAACATTGCTGTTGGGTTGGCCTCTGTGCTGACATATCTACATCAGGAATGTGAGCAGCAGGTCATCCACAGAGATATAAAAACTGGTAATGTACTGCTGGATGCAAACTTCAATGTGAGATTGGGCGATTTTGGATTGGCAAAGCTCATGGATCACGACAAGAGCCCTGTTTCGACTCTAACTGCAGGAACAATGGGATACCTTGCACCTGAGTACCTTCAATATGGGAAAGCGACTGAGAAAACCGACGTCTTCAGCTACGGTGTGGTTATCCTCGAAGTGGCCTGTGGGAGGAGGCCGATCGAAAGAGAAGCAGGTACTCAAAAGATGGTCAATCTTGTGGATTGGGTTTGGGGATTGCATTCTCAAGGCAAGATCATCGAAGCAGCGGATAAAAGGTTGAGCGGGGAGTTCAAGGAAGAAGAAATGAGAAAGCTGTTACTCGTAGGATTGAGCTGTGCAAACCCGGATAGCTCGGCAAGGCCTTCGATGAGGAAGGTCCTACAGATTCTCAACAACGAAGCAGTTCCGGTGTTCGTACCTAAAATGAAGCCTAGCCTAACATTTTCTTGTGGCTTTTCACTGACTGTGGATGACATTATAGTAGAGGAAGGAAGAGAGTGGGAATCTTCAAAGACAGCCATTGTCCAAATAGACTGA 2010 46.27 MPPRNLLVFSFFLILFPPPKTQSIGFDFTSFNIRNLTLLGDSHLRDGVIGLTKELGVPSSSAGAVIYNKPIGFYDADSNTTASFSTSFSFSITNINPSSFGDGLSFFLSPDNQTLGSPGGYLGLVNSSQLTKNKFVAVEFDTRLDSYFNDPNAHHVGLDIESLISIKTANPFSQGVNLKSGNLITAWIEYKNEDCRLKVFLSYSGLKPSKALLDVDVDLSSYLKEVMYVGFSGSTEGSTELHVIDSWSFYTSGFVPARPRFNPHNVSDSSVIVHPNISISDPGNGHHSRLGLGLGIAGPTFFCAVIAVFGFFSLRKWRKIRTQKSFKAELLTGPREFSYRELKTATKGFHSSRIIGNGAFGTVYKAFFISSGTISAVKRSKHSHEGKTEFLAELSIIARLRHKNLVQLQGWCVEKGELLLVYDFMPNGSLDRLLYQESGEASLLNWSHRYNIAVGLASVLTYLHQECEQQVIHRDIKTGNVLLDANFNVRLGDFGLAKLMDHDKSPVSTLTAGTMGYLAPEYLQYGKATEKTDVFSYGVVILEVACGRRPIEREAGTQKMVNLVDWVWGLHSQGKIIEAADKRLSGEFKEEEMRKLLLVGLSCANPDSSARPSMRKVLQILNNEAVPVFVPKMKPSLTFSCGFSLTVDDIIVEEGREWESSKTAIVQID 669
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 19686140 19688149 - Tan0001391.1 Tan01g1843 739267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g1843 669 ProSitePatterns Protein kinases ATP-binding region signature. 355 378 IPR017441 GO:0005524(InterPro)
Tan01g1843 669 SUPERFAMILY Protein kinase-like (PK-like) 332 642 IPR011009 -
Tan01g1843 669 ProSiteProfiles Protein kinase domain profile. 349 629 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g1843 669 Pfam Protein kinase domain 349 619 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g1843 669 Pfam Legume lectin domain 25 255 IPR001220 GO:0030246(InterPro)
Tan01g1843 669 FunFam L-type lectin-domain containing receptor kinase VIII.1 313 424 - -
Tan01g1843 669 Gene3D - 21 258 - -
Tan01g1843 669 SUPERFAMILY Concanavalin A-like lectins/glucanases 23 257 IPR013320 -
Tan01g1843 669 CDD lectin_legume_LecRK_Arcelin_ConA 26 253 IPR001220 GO:0030246(InterPro)
Tan01g1843 669 Gene3D Phosphorylase Kinase; domain 1 312 424 - -
Tan01g1843 669 FunFam L-type lectin-domain containing receptor kinase VIII.1 22 262 - -
Tan01g1843 669 Gene3D Transferase(Phosphotransferase) domain 1 425 636 - -
Tan01g1843 669 ProSitePatterns Legume lectins beta-chain signature. 136 142 IPR019825 -
Tan01g1843 669 ProSitePatterns Serine/Threonine protein kinases active-site signature. 471 483 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan01g1843 669 FunFam L-type lectin-domain containing receptor kinase VIII.1 425 639 - -
Tan01g1843 669 SMART serkin_6 349 626 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g1843 669 PANTHER - 36 627 IPR050528 GO:0002229(PANTHER)|GO:0005886(PANTHER)|GO:0042742(PANTHER)
Tan01g1843 669 CDD STKc_IRAK 355 623 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g1843 Tan-Chr1:19686140 Tan08g1896 Tan-Chr8:71305982 1.50E-171 dispersed
Tan03g0847 Tan-Chr3:64640696 Tan01g1843 Tan-Chr1:19686140 1.20E-11 dispersed
Tan01g1843 Tan-Chr1:19686140 Tan03g0928 Tan-Chr3:65681862 9.60E-97 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67050 PF00069 Pkinase 1.40E-51 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g1843 - - - 0.0