Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g1865 ATGGACCAAGTCATGAAAAAAAGACATAATTTCTCCTTCACAAATTTCTACTCCACTACTCTTTTTTCTCCAACTCCAACCACTTTTTCCTCTCACAGAGCTCCGGCAATGGCTTCCACGGCGGAGGAAACAAAAACCATCACTCCCTCCTCCTCCTCCTCCTCCTCCAACGACAACCAAGAACAACAACACTACGCTTACGCCGTGCATCTGGTTACCTTATCGGTGCTGCCAATGACACTCCAAGCAGCCTTCGAGCTCGGCGTGTTTGAGATCTTGGCCAAGGCCGGCCATGGAGCCGAGCTCTCTCCGACTGAGATAGCGTCGAAGATAACGAGTGCGAACCCGGATGCGGCGTCGATGGTTGATCGGATCCTGAGGCTTCTGGCGACCCACTCGGTGGTTGGCTGCTCTGTGAGTATTGATGAACATGGGAATATGCAGAGACTCTATAGCCTTACGCCAGTTTCAAAGTATTATGTTCGTAATGAAGATGGAGTGTCGTTGGGTGCTACTTTATCGTTGATTCAGGATAAAGTCTTTCTCCATAGCTGGAGTGAGCTGAAGAATGCAGTAATTGAAGGAGGAGTTCCTTTCAACAGGGCTCATGGTGGAGTTCATGCCTTTGAATACCCTGGCTTGGATCCAAGATTCAACCAAGTTTTCAACACTGCAATGATAAATTACACCACCGTAGCCATCAAGAAAATTGTCAAGTCCTACAAGGGCTTTGCAAACCTCAAGCAACTAGTTGATGTTGGTGGTGGCCTTGGGGTCACTCTTAAAATCATAACTTCTACATACCCTTCAATCAAAGGCATCAACTTCGACTTGCCTCATGTAATTCAAGATGCCCCTCCCTATCCCGGTGTAGAACATGTAGGAGGAGACATGTTTGAGAAAGTTCCAAAGGGAGATGCTATTTTCATGAAGTGGATACTTCATGATTGGAGCGACGATCATTGCATAAAGTTGTTGAAAAACTGCTACGCTGCGATCCCAGATGATGGAAAAGTAATCATAGCAGAAGCAGTGTTACCAACAGTGCCTGAGACCACAAATGCAATGAAAACCATCGCCCAAGGCGATGTGCTTATGATGACTCAAAATCCAGGCGGAAAGGAACGAACTCACGACGAATTTAAAGCCCTTGCAACCAATGCTGGCTTTAAACACATCATATTCGACTCTTTAGTATCCAATCTTTGGATTATAGAGTTTTTTAAATGA 1230 45.69 MDQVMKKRHNFSFTNFYSTTLFSPTPTTFSSHRAPAMASTAEETKTITPSSSSSSSNDNQEQQHYAYAVHLVTLSVLPMTLQAAFELGVFEILAKAGHGAELSPTEIASKITSANPDAASMVDRILRLLATHSVVGCSVSIDEHGNMQRLYSLTPVSKYYVRNEDGVSLGATLSLIQDKVFLHSWSELKNAVIEGGVPFNRAHGGVHAFEYPGLDPRFNQVFNTAMINYTTVAIKKIVKSYKGFANLKQLVDVGGGLGVTLKIITSTYPSIKGINFDLPHVIQDAPPYPGVEHVGGDMFEKVPKGDAIFMKWILHDWSDDHCIKLLKNCYAAIPDDGKVIIAEAVLPTVPETTNAMKTIAQGDVLMMTQNPGGKERTHDEFKALATNAGFKHIIFDSLVSNLWIIEFFK 409
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 19864728 19879269 + Tan0015421.1 Tan01g1865 739289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g1865 409 PANTHER O-METHYLTRANSFERASE 66 391 IPR016461 GO:0008168(InterPro)|GO:0008171(PANTHER)|GO:0008757(PANTHER)|GO:0019438(PANTHER)|GO:0032259(PANTHER)
Tan01g1865 409 SUPERFAMILY Winged helix DNA-binding domain 59 163 IPR036390 -
Tan01g1865 409 PIRSF O-mtase 46 409 IPR016461 GO:0008168(InterPro)
Tan01g1865 409 Gene3D Vaccinia Virus protein VP39 161 409 IPR029063 -
Tan01g1865 409 Pfam O-methyltransferase domain 185 391 IPR001077 GO:0008171(InterPro)
Tan01g1865 409 FunFam Caffeic acid O-methyltransferase 161 409 - -
Tan01g1865 409 Gene3D - 45 160 IPR036388 -
Tan01g1865 409 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 69 409 IPR016461 GO:0008168(InterPro)
Tan01g1865 409 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 167 406 IPR029063 -
Tan01g1865 409 MobiDBLite consensus disorder prediction 28 59 - -
Tan01g1865 409 Pfam Dimerisation domain 79 130 IPR012967 GO:0046983(InterPro)
Tan01g1865 409 FunFam Caffeic acid 3-O-methyltransferase 46 160 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g0033 Tan-Chr1:589373 Tan01g1865 Tan-Chr1:19864728 5.20E-111 dispersed
Tan01g0034 Tan-Chr1:589373 Tan01g1865 Tan-Chr1:19864728 1.10E-77 dispersed
Tan01g1865 Tan-Chr1:19864728 Tan01g1868 Tan-Chr1:19951679 2.60E-145 dispersed
Tan01g1865 Tan-Chr1:19864728 Tan01g1866 Tan-Chr1:19891429 3.30E-108 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g1865 K13066 - csv:101214916 576.63