Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan01g1865 | ATGGACCAAGTCATGAAAAAAAGACATAATTTCTCCTTCACAAATTTCTACTCCACTACTCTTTTTTCTCCAACTCCAACCACTTTTTCCTCTCACAGAGCTCCGGCAATGGCTTCCACGGCGGAGGAAACAAAAACCATCACTCCCTCCTCCTCCTCCTCCTCCTCCAACGACAACCAAGAACAACAACACTACGCTTACGCCGTGCATCTGGTTACCTTATCGGTGCTGCCAATGACACTCCAAGCAGCCTTCGAGCTCGGCGTGTTTGAGATCTTGGCCAAGGCCGGCCATGGAGCCGAGCTCTCTCCGACTGAGATAGCGTCGAAGATAACGAGTGCGAACCCGGATGCGGCGTCGATGGTTGATCGGATCCTGAGGCTTCTGGCGACCCACTCGGTGGTTGGCTGCTCTGTGAGTATTGATGAACATGGGAATATGCAGAGACTCTATAGCCTTACGCCAGTTTCAAAGTATTATGTTCGTAATGAAGATGGAGTGTCGTTGGGTGCTACTTTATCGTTGATTCAGGATAAAGTCTTTCTCCATAGCTGGAGTGAGCTGAAGAATGCAGTAATTGAAGGAGGAGTTCCTTTCAACAGGGCTCATGGTGGAGTTCATGCCTTTGAATACCCTGGCTTGGATCCAAGATTCAACCAAGTTTTCAACACTGCAATGATAAATTACACCACCGTAGCCATCAAGAAAATTGTCAAGTCCTACAAGGGCTTTGCAAACCTCAAGCAACTAGTTGATGTTGGTGGTGGCCTTGGGGTCACTCTTAAAATCATAACTTCTACATACCCTTCAATCAAAGGCATCAACTTCGACTTGCCTCATGTAATTCAAGATGCCCCTCCCTATCCCGGTGTAGAACATGTAGGAGGAGACATGTTTGAGAAAGTTCCAAAGGGAGATGCTATTTTCATGAAGTGGATACTTCATGATTGGAGCGACGATCATTGCATAAAGTTGTTGAAAAACTGCTACGCTGCGATCCCAGATGATGGAAAAGTAATCATAGCAGAAGCAGTGTTACCAACAGTGCCTGAGACCACAAATGCAATGAAAACCATCGCCCAAGGCGATGTGCTTATGATGACTCAAAATCCAGGCGGAAAGGAACGAACTCACGACGAATTTAAAGCCCTTGCAACCAATGCTGGCTTTAAACACATCATATTCGACTCTTTAGTATCCAATCTTTGGATTATAGAGTTTTTTAAATGA | 1230 | 45.69 | MDQVMKKRHNFSFTNFYSTTLFSPTPTTFSSHRAPAMASTAEETKTITPSSSSSSSNDNQEQQHYAYAVHLVTLSVLPMTLQAAFELGVFEILAKAGHGAELSPTEIASKITSANPDAASMVDRILRLLATHSVVGCSVSIDEHGNMQRLYSLTPVSKYYVRNEDGVSLGATLSLIQDKVFLHSWSELKNAVIEGGVPFNRAHGGVHAFEYPGLDPRFNQVFNTAMINYTTVAIKKIVKSYKGFANLKQLVDVGGGLGVTLKIITSTYPSIKGINFDLPHVIQDAPPYPGVEHVGGDMFEKVPKGDAIFMKWILHDWSDDHCIKLLKNCYAAIPDDGKVIIAEAVLPTVPETTNAMKTIAQGDVLMMTQNPGGKERTHDEFKALATNAGFKHIIFDSLVSNLWIIEFFK | 409 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 19864728 | 19879269 | + | Tan0015421.1 | Tan01g1865 | 739289 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan01g1865 | 409 | PANTHER | O-METHYLTRANSFERASE | 66 | 391 | IPR016461 | GO:0008168(InterPro)|GO:0008171(PANTHER)|GO:0008757(PANTHER)|GO:0019438(PANTHER)|GO:0032259(PANTHER) | |
Tan01g1865 | 409 | SUPERFAMILY | Winged helix DNA-binding domain | 59 | 163 | IPR036390 | - | |
Tan01g1865 | 409 | PIRSF | O-mtase | 46 | 409 | IPR016461 | GO:0008168(InterPro) | |
Tan01g1865 | 409 | Gene3D | Vaccinia Virus protein VP39 | 161 | 409 | IPR029063 | - | |
Tan01g1865 | 409 | Pfam | O-methyltransferase domain | 185 | 391 | IPR001077 | GO:0008171(InterPro) | |
Tan01g1865 | 409 | FunFam | Caffeic acid O-methyltransferase | 161 | 409 | - | - | |
Tan01g1865 | 409 | Gene3D | - | 45 | 160 | IPR036388 | - | |
Tan01g1865 | 409 | ProSiteProfiles | SAM-dependent O-methyltransferase class II-type profile. | 69 | 409 | IPR016461 | GO:0008168(InterPro) | |
Tan01g1865 | 409 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 167 | 406 | IPR029063 | - | |
Tan01g1865 | 409 | MobiDBLite | consensus disorder prediction | 28 | 59 | - | - | |
Tan01g1865 | 409 | Pfam | Dimerisation domain | 79 | 130 | IPR012967 | GO:0046983(InterPro) | |
Tan01g1865 | 409 | FunFam | Caffeic acid 3-O-methyltransferase | 46 | 160 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan01g0033 | Tan-Chr1:589373 | Tan01g1865 | Tan-Chr1:19864728 | 5.20E-111 | dispersed | |
Tan01g0034 | Tan-Chr1:589373 | Tan01g1865 | Tan-Chr1:19864728 | 1.10E-77 | dispersed | |
Tan01g1865 | Tan-Chr1:19864728 | Tan01g1868 | Tan-Chr1:19951679 | 2.60E-145 | dispersed | |
Tan01g1865 | Tan-Chr1:19864728 | Tan01g1866 | Tan-Chr1:19891429 | 3.30E-108 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan01g1865 | K13066 | - | csv:101214916 | 576.63 |