Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g1867 ATGGTTTCCACAGCAGAAAATAAAACCATCCCTTCCAATTCCAGTTCCATTGAAGAAACTAACGACCAAGAATACCAACACTTCGCTTACGCTATGGAGCTGGCCACCTCATCTGCTCTGCCGATGGCACTTCGAGCAGCCTTTGAGCTCGGCGTGTTTGAGATCTTGGCCAAGGCCGGCCATGGGGCCGAGCTCTCTTCAGCTCAGATAGCGGCGGAGATAACCGCTACGAACCCGGATGCGGCGTCGATGGTCGATCGGATCCTGAGGCTTCTGGCCACCCACTCGGTGGTGGGCTGCTCTCATGTGGCCATTGCCGACCAACAACATCAACATGGGAATCTGCAGAGACTCTACAGCCTTACGCCGGTTTCTAAGTATTATGTTCGTAATGAAGATGGAGTCTCATTGGGTCCCTTCGTATCATTGGTGCATGATAAAGTCTATCTTGATAGCTGGAGTGAGCTGAAGAATGCAGTGATAGAGGGAGGAATTGCATTCAACAGGGCTCATGGAGGAGCAAACGCCTTTGAATACCCTAACTTGGATCCAAGATTCAACCAAGTTTTCAACATTGCAATGCTCAATCTCACCACCATGGTTGTAAAGAATACTGTTCAATCTTACAAGGGCTTTGCAAACCTCAAGCAATTGGTTGATGTTGGTGGTGGCCTTGGGGTTGCCCTTCAAATTATAACTTCTACCTACCCTTCCATTAAGGGCATCAACTTCGACTTGCCTCATGTCATTTGTCATGCCCCTCCTTATCTTGGTGTAGAACATATAGGAGGGGATATGTTTGAGAGCATACCAAAAGGAGATGCTATTTTCATGAAGTGGATTCTTCATGATTGGAATGATGAGTGTTGCGTGAAGTTATTTTAG 885 47.34 MVSTAENKTIPSNSSSIEETNDQEYQHFAYAMELATSSALPMALRAAFELGVFEILAKAGHGAELSSAQIAAEITATNPDAASMVDRILRLLATHSVVGCSHVAIADQQHQHGNLQRLYSLTPVSKYYVRNEDGVSLGPFVSLVHDKVYLDSWSELKNAVIEGGIAFNRAHGGANAFEYPNLDPRFNQVFNIAMLNLTTMVVKNTVQSYKGFANLKQLVDVGGGLGVALQIITSTYPSIKGINFDLPHVICHAPPYLGVEHIGGDMFESIPKGDAIFMKWILHDWNDECCVKLF 294
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 19891429 19897386 - Tan0010905.2 Tan01g1867 739291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g1867 294 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 32 294 IPR016461 GO:0008168(InterPro)
Tan01g1867 294 PANTHER O-METHYLTRANSFERASE 29 293 IPR016461 GO:0008168(InterPro)|GO:0008171(PANTHER)|GO:0008757(PANTHER)|GO:0019438(PANTHER)|GO:0032259(PANTHER)
Tan01g1867 294 Pfam O-methyltransferase domain 153 293 IPR001077 GO:0008171(InterPro)
Tan01g1867 294 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 133 294 IPR029063 -
Tan01g1867 294 Pfam Dimerisation domain 42 93 IPR012967 GO:0046983(InterPro)
Tan01g1867 294 Gene3D Vaccinia Virus protein VP39 129 294 IPR029063 -
Tan01g1867 294 FunFam Caffeic acid 3-O-methyltransferase 9 128 - -
Tan01g1867 294 Gene3D - 8 128 IPR036388 -
Tan01g1867 294 SUPERFAMILY Winged helix DNA-binding domain 22 131 IPR036390 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g1867 Tan-Chr1:19891429 Tan05g0792 Tan-Chr5:5766960 1.30E-50 dispersed
Tan01g1866 Tan-Chr1:19891429 Tan01g1867 Tan-Chr1:19891429 4.20E-156 tandem
Tan01g1867 Tan-Chr1:19891429 Tan01g1868 Tan-Chr1:19951679 4.90E-162 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g1867 K13066 - csv:101205290 410.994