Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g1875 ATGAAGGTAGTCAAGAACAAAGCCAAAGAAGCAATTTTCTACTCATACAACAGATACATCAATGGCTTTGCTGCCATGCTTGATGAAAAGCAAGCAACAGATCTTGCAAAATTTCCAGACGTCGTTTCAGTCTTTGAATGTCAAGCAAGAAAATTGCACACAACACGATCATGGAACTTTCTCGGAATGGAAAAACATGAAGAAATTCCTTCGAACTCGATTTGGAATGTTGCGAGGTTTGGTGATGATACAATCATAGCAAACTTTGACACAGGTGTTTGGCCAGAAGCTAAGAGCTTTAGTGATGAAGGGTATGGTCCTGTCCCCTCAAGGTGGAAGGGAACTTGTCAAAGTGATACAGACCCCAACTTCCATTGCAACAGGAAGTTGATTGGAGCAAGATTCTTCAACAAAGGCTATGGTGAACTCAGTGTTACCTTCAATTCTTCAAGAGACAACGTAGGCCATGGAACCCACACTTTATCCATAGCTGGTGGCAATTTCTTAACTGGAGCTAATGTTTTGGGCATGGGCAATGGAACTGCCAAAGGTGGTTCCCCTCGAGCCCGTGTTGCATCCTACAAGGTTTGTTGGCCAGCAGAAGGTGGTGAGTGTTTGGACCCAAATACCTTAGCTGCCTATGAAGCTGCAATTAGCGATGGCGTTGATGTCATCTCGATTTCCGTTGGTGGAGAACCCAAAGAGTTTTTTAGTGATGCACTCTCTGTAGGAGCCTTCCATGCAGTTCAGCATGGTATTGTTGTTATTTGCTCGGCTGGGAACTTTGGACCAACTCCTGGGACCGTATCAAATGTGTCACCATGGGTTCTAACTGTTGGAGCAAGTACCATTGATAGGGATTTCACCAATTTTGTGGTCCTGGGGAACAAGAAGAAACTCAAGGGTACAACCTTTTCTTCTAAGGCATTGCCATTTAACAAGTTCTACCCTTTAATCAATGCTGTGGATGCAAAAGCCAACAATGTCTCTAATAGTGATGCGGAAGTTTGTAATGAGAGATCGCTTGATCCTACGAAGTTGACAGGAAAGATTGTGGTTTGCCTTCGAGGGGGTATTTCAAGAGTGTCCAAGGGCTATGTAGTTGCCCAAGCAGGGGCTGTTGGGATGATTTTGGTTAACGATGAGGACAGGGGGAATGCAATAGTAACTGATCTGCACGTCCTTCCAGCTTCCCATGTAACCTATAACGATAGCATATCCATCTCCCAGTACATCAATTCTACAAAAACACCAATGGCTTACATCAGTTCTGTGAAGACAGAAGTAGAGATCAAACCATCCCCAGTGATGGCAGATTTCTCATCAAGAGGCCCCAATACAATCGAGGAGTCCATCCTTAAGCCTGATATAACAGCACCAGGAGTGAATATAATAGCGGCTTACCCCAATGTAATACCATTGACAGAATTACGGCTTGACGATCGTCGAGCTCCTTTTAAGGTAGATTCTGGCACATCCATGGCCTGCCCCCATGTCGCTGGCATTGTAGGCCTTCTCAAAACCCTAAATCCCAAATGGAGTCCAGCCGCCATTAAATCTGCAATCATGACAACAGCCAAAACAAAAGACAACAGCTTACATCCAATTCTAGACTCCACGGGACTCAAAGCAACTCCATTGGCATACGGCGCCGGACATGTCGATCCAAACAGTGCGATGGACCCTGGCCTCGTTTACGACATTACAATCGACGATTACCTCAATTTCTTATGTGCACGAGGCTACAATGCAACACAAATCAACAAATTATCCAAGAAGTTATTCGTTTGCGATCAATCATTCAAAGTGACGGATTTGAATTACCCATCGATCTCAGTCACGGATCTGAAAACGGACCCCGTGACGATCAATCGAAAGTTGAAGAACGTGGGAAGTCCAGGGACGTACATTGCTCGAGTGAAGGCGCCTTTGGAAGTTTCTATCACCGTTGAGCCAAGTAGATTGCAATTTACGGCCATGGATGAAGAGAAGAACTTCAAGGTGGTGTTGCAGAGCACTGGAAAGGGAAATCAACAGGGTTATGTGTTTGGGGTATTAGCATGGTCTGATGGCAAACACCATGTTAGGAGCTCCATTGCTGTGAACTTGGGGAAATAG 2118 44.95 MKVVKNKAKEAIFYSYNRYINGFAAMLDEKQATDLAKFPDVVSVFECQARKLHTTRSWNFLGMEKHEEIPSNSIWNVARFGDDTIIANFDTGVWPEAKSFSDEGYGPVPSRWKGTCQSDTDPNFHCNRKLIGARFFNKGYGELSVTFNSSRDNVGHGTHTLSIAGGNFLTGANVLGMGNGTAKGGSPRARVASYKVCWPAEGGECLDPNTLAAYEAAISDGVDVISISVGGEPKEFFSDALSVGAFHAVQHGIVVICSAGNFGPTPGTVSNVSPWVLTVGASTIDRDFTNFVVLGNKKKLKGTTFSSKALPFNKFYPLINAVDAKANNVSNSDAEVCNERSLDPTKLTGKIVVCLRGGISRVSKGYVVAQAGAVGMILVNDEDRGNAIVTDLHVLPASHVTYNDSISISQYINSTKTPMAYISSVKTEVEIKPSPVMADFSSRGPNTIEESILKPDITAPGVNIIAAYPNVIPLTELRLDDRRAPFKVDSGTSMACPHVAGIVGLLKTLNPKWSPAAIKSAIMTTAKTKDNSLHPILDSTGLKATPLAYGAGHVDPNSAMDPGLVYDITIDDYLNFLCARGYNATQINKLSKKLFVCDQSFKVTDLNYPSISVTDLKTDPVTINRKLKNVGSPGTYIARVKAPLEVSITVEPSRLQFTAMDEEKNFKVVLQSTGKGNQQGYVFGVLAWSDGKHHVRSSIAVNLGK 705
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 20121945 20126620 + Tan0002548.1 Tan01g1875 739299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g1875 705 SUPERFAMILY PA domain 344 415 IPR046450 -
Tan01g1875 705 ProSitePatterns Serine proteases, subtilase family, serine active site. 491 501 IPR023828 -
Tan01g1875 705 CDD PA_subtilisin_like 292 422 - -
Tan01g1875 705 Pfam Fibronectin type-III domain 605 701 IPR041469 -
Tan01g1875 705 SUPERFAMILY Subtilisin-like 52 564 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Tan01g1875 705 Gene3D - 285 429 - -
Tan01g1875 705 Pfam PA domain 333 405 IPR003137 -
Tan01g1875 705 Pfam Peptidase inhibitor I9 6 53 IPR010259 -
Tan01g1875 705 CDD Peptidases_S8_3 51 526 IPR034197 -
Tan01g1875 705 Gene3D Peptidase S8/S53 domain 83 573 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Tan01g1875 705 FunFam Subtilisin-like protease SBT1.5 83 297 - -
Tan01g1875 705 Pfam Subtilase family 81 531 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Tan01g1875 705 Gene3D - 577 703 - -
Tan01g1875 705 FunFam Subtilisin-like protease SBT1.5 577 704 - -
Tan01g1875 705 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 7 699 IPR045051 -
Tan01g1875 705 FunFam subtilisin-like protease SBT1.5 285 429 - -
Tan01g1875 705 PRINTS Subtilisin serine protease family (S8) signature 152 165 IPR015500 -
Tan01g1875 705 PRINTS Subtilisin serine protease family (S8) signature 490 506 IPR015500 -
Tan01g1875 705 PRINTS Subtilisin serine protease family (S8) signature 81 100 IPR015500 -
Tan01g1875 705 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 2 53 IPR037045 -
Tan01g1875 705 ProSiteProfiles Serine proteases, subtilase domain profile. 57 560 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g1875 Tan-Chr1:20121945 Tan09g0366 Tan-Chr9:34350106 0.00E+00 dispersed
Tan01g1875 Tan-Chr1:20121945 Tan01g1876 Tan-Chr1:20132310 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g1875 - - - 0.0