Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g1876 ATGGATGCCTCCAATTTTTCTCCATTACTTTTGGCATTCCTTGCTTTCTCTGTTCTGCAAACATCTACCTCGTACATCGTATACCTAGGATCGCATTCTCATGGTTTGAGTCCTTCCTCATTCGATCTCCAACTTGTAAAAGAATCTCACTATGATTTATTGGGATCAGTTTTGGGAAGCAAAGAGATAGCCAAAGAAGCCATTTTCTACTCATACAACAGATATATCAATGGCTTTGCTGCCATGCTCGATGAGAAACAAGCAGCAGATCTTGCAAGATTTCCAAATGTCATTTCGGTTTTTGAAAGTAAGGAAAAACAATTGCACACAACAAGATCATGGAATTTTCTCGGAATAGAAAGACAAAATGCAATTCCTTCAGACTCCATTTGGAATGTTTCGAGGTTTGGTGATGATACAATTATAGCTAACTTTGACACAGGTGTTTGGCCAGAATCTAAGAGCTTCAGTGATGAAGGATATGGGCCTATCCCTTCAAGGTGGTTGGGTACTTGTCAAAGTGACGCTGACCCCAACTTCCATTGCAACAGGAAGCTAATTGGAGCAAGATTCTTTAACAAAGCCTATGGAGCACTCAATGTCAGCTTTAATTCTTCAAGGGACCATGATGGCCATGGAACCCATACTTTATCCACAGCTGGTGGCAATTTTGTCTCTGGGGCTAATGTTTTTGGCAATGGCAATGGAACTGCCAAAGGTGGCTCACCACGAGCCCGTGTCGCATCCTATAAGGTCTGTTGGCCAGCAGAAGGTGGAGGGTGTTTTGACCCAGATATCTTAGCCGCCTTCGAAGCTGCCATTAGCGATGGCGTTGACGTTATCTCAATTTCTGTTGGTGGACTTCCCTCGGACTTTCTAAACGATGCGCTATCCATAGGAGCCTTCCATGCAGTTCAGCAAGGCATTGTTGTTGTTTGCTCGGCTGGGAACTCGGGACCAGCTCCTGAAACTGTATCAAATGTGTCGCCATGGATGTTAACTGTTGGAGCTAGTACGATTGATAGAGATTTCACCAATTTTGTGGTCCTAGGGAACAAGAAGAAACTCAAGGGTGCAAGCCTTTCTTCTAAGGCATTGCCCGTTAACAAGTTCTACCCCTTAATTAACGCTGTGGATGCGAAAGTCAGCAATGTCTCCAATCGTGATGCGGAAATTTGTGATGACGGAACGCTTGATTCCACGAAGTCCAATGGGAAGATTGTGGTTTGCCTTCGAGGGGTTAATTCAAGAGGGGCCAAAAGTTATGTGGCTGCTCAGGCAGGGGCTGTTGGGATGATTCTGGTTAACGATGAGCAAAGTGGGAATGATATTTTTGCTGATCCACACATCATTCCAGCTTCCAATGTAAACTATAATGATAGCATATACATCTCCCAATACATCGACTCTACAACGACACCAATGGCTTACATCAGTTCTGTGAGAACAGAACTTGGAGTCAAGCCAGCCCCAACAATGGCTGGTTTCTCATCAAGAGGTCCTAATACAATCGAGGAGTCAATCCTCAAGCCTGATATAACAGCACCAGGAGTGAATATAATTGCGGCTTACCCCGATGGAATACCTTTGACAAATTTACCAGTTGATGATCGTCGAGTTCCTTTTAAGGTAGAATCTGGCACATCCATGGCCTGCCCCCATGTTGCTGGCATTGCAGGCCTTCTCAAAACCCTAAATCCAAAATGGAGTCCAGCCGCCATTAAATCTGCAATCATGACCACAGCCAAAACAAGAGACAACAGCTTACGTCCAATCCTAGACTCCACAAGACTCAAAGCAACTCCATTAGCATACGGCGCCGGACATGTTGATCCAAACAGTGCGATGGACCCTGGCCTCGTTTACGACATTACAACCGACGAGTACCTCAATTTCTTGTGCGCTCGAGGCTACAATGCGACGCAAATCAACAAATTCTCCAATGAGACCTTCGTTTGTGATCAATCATTCAAAGTGACGGATCTTAATTACCCTTCGATCTCAGTCACCGATCTGAAAACAGGCCCTGTGACGATCAATCGAAAGGTGAAGAACGTGGGAAGTCTAGGGACGTATATTGCTCGAGTGAAGGCGCCTTTGGAAGTTTCAATCACCGTTGAGCCAAGTACATTACAATTTACTGCCATGGATGAAGAGAAGAGCTTCAAGGTGGTGTTGCAGAACACTGGAAAGGGAAATCAACAGGGTCATGTGTTTGGGACATTGGCATGGTCTGATGGCAAACACCATGTTAGAAGCCCCATTGCTGTTAATTTAGGGAAATAG 2286 44.88 MDASNFSPLLLAFLAFSVLQTSTSYIVYLGSHSHGLSPSSFDLQLVKESHYDLLGSVLGSKEIAKEAIFYSYNRYINGFAAMLDEKQAADLARFPNVISVFESKEKQLHTTRSWNFLGIERQNAIPSDSIWNVSRFGDDTIIANFDTGVWPESKSFSDEGYGPIPSRWLGTCQSDADPNFHCNRKLIGARFFNKAYGALNVSFNSSRDHDGHGTHTLSTAGGNFVSGANVFGNGNGTAKGGSPRARVASYKVCWPAEGGGCFDPDILAAFEAAISDGVDVISISVGGLPSDFLNDALSIGAFHAVQQGIVVVCSAGNSGPAPETVSNVSPWMLTVGASTIDRDFTNFVVLGNKKKLKGASLSSKALPVNKFYPLINAVDAKVSNVSNRDAEICDDGTLDSTKSNGKIVVCLRGVNSRGAKSYVAAQAGAVGMILVNDEQSGNDIFADPHIIPASNVNYNDSIYISQYIDSTTTPMAYISSVRTELGVKPAPTMAGFSSRGPNTIEESILKPDITAPGVNIIAAYPDGIPLTNLPVDDRRVPFKVESGTSMACPHVAGIAGLLKTLNPKWSPAAIKSAIMTTAKTRDNSLRPILDSTRLKATPLAYGAGHVDPNSAMDPGLVYDITTDEYLNFLCARGYNATQINKFSNETFVCDQSFKVTDLNYPSISVTDLKTGPVTINRKVKNVGSLGTYIARVKAPLEVSITVEPSTLQFTAMDEEKSFKVVLQNTGKGNQQGHVFGTLAWSDGKHHVRSPIAVNLGK 761
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 20132310 20135564 - Tan0008388.1 Tan01g1876 739300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g1876 761 SUPERFAMILY PA domain 400 460 IPR046450 -
Tan01g1876 761 Gene3D Peptidase S8/S53 domain 139 629 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Tan01g1876 761 ProSitePatterns Serine proteases, subtilase family, serine active site. 547 557 IPR023828 -
Tan01g1876 761 PRINTS Subtilisin serine protease family (S8) signature 137 156 IPR015500 -
Tan01g1876 761 PRINTS Subtilisin serine protease family (S8) signature 208 221 IPR015500 -
Tan01g1876 761 PRINTS Subtilisin serine protease family (S8) signature 546 562 IPR015500 -
Tan01g1876 761 FunFam Subtilisin-like protease SBT1.5 139 353 - -
Tan01g1876 761 Pfam PA domain 389 460 IPR003137 -
Tan01g1876 761 CDD PA_subtilisin_like 348 478 - -
Tan01g1876 761 FunFam subtilisin-like protease SBT1.5 341 485 - -
Tan01g1876 761 FunFam Subtilisin-like protease SBT1.5 633 760 - -
Tan01g1876 761 SUPERFAMILY Subtilisin-like 108 620 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Tan01g1876 761 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 25 755 IPR045051 -
Tan01g1876 761 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 109 IPR037045 -
Tan01g1876 761 FunFam Subtilisin-like protease SBT5.3 14 109 - -
Tan01g1876 761 Gene3D - 633 759 - -
Tan01g1876 761 Pfam Peptidase inhibitor I9 24 109 IPR010259 -
Tan01g1876 761 CDD Peptidases_S8_3 106 582 IPR034197 -
Tan01g1876 761 ProSiteProfiles Serine proteases, subtilase domain profile. 113 616 - -
Tan01g1876 761 Pfam Subtilase family 137 585 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Tan01g1876 761 Gene3D - 341 485 - -
Tan01g1876 761 Pfam Fibronectin type-III domain 661 757 IPR041469 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g1876 Tan-Chr1:20132310 Tan09g0366 Tan-Chr9:34350106 0.00E+00 dispersed
Tan01g1875 Tan-Chr1:20121945 Tan01g1876 Tan-Chr1:20132310 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g1876 - - - 0.0