Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g1883 ATGGAGCCTTTCACTTTCAATCCATCTTCATTGCTTCTGTTGTTCTTTCTTTTTGCTCTGTTGCAAACCTCCACCATTGCTGCAGCCAAGAAGGCAAACATTGATGAAATTGTTCTTCTTCTTGTGCAGTCTTATATTGTTTATTTGGGATCGCATTCACATGGGTTGAATCCTTCTGAGTTTGATATCCAATTTGCAACTGATTCTCACTACAATTTGCTTGGGTCCTTTTTAGGAAGTAATGAAGCTGCTAAGGAAGCGATTTTCTACTCATACAATAGACATATCAATGGCTTTGCTGCTGTGCTTGATCAGAAAGTTGCAGAAGATCTAGCTAACCATCCCGACGTGGTATCAGTACACGAAAACAAGGAAAGAAAACTGCACACAACAAATTCATGGAGCTTTCTTGGATTAGAGAAAGATGGTGGAATCCCTTCAAACTCTCTTTGGAATGTTGCAAGTTTTGGTGAATCTACCATCATTGCCAATCTTGACACTGGCGTTTGGCCAGAATCAAAGAGCTTCGATGATAAAGGATATGGACCTATCCCAACAAGGTGGAAGGGAAGTTGTGAAGGTGGCTCTAACTTTCACTGCAACAGGAAGCTGATAGGAGCAAGGTACTTCAACAAAGGGTATGCATCGGTGGTAGGACCTCTGAATGCAAGCTTCGAAACAGCAAGGGACCATGAAGGGCATGGAACACACACTTTATCCACAGCAGGAGGCAATCTCGTTTCAGGAGCAAACGTTTTTGGGAAGGGCAATGGCACTGCAAAAGGCGGTTCCCCTAAAGCCCTTGTTGCTGCCTATAAAGTATGTTGGCCTCAACTGTTCTTGTTTGGTGGTTGCTTTGAGTCCGACATTCTCGCTGGCATTGAAGCTGCCATTACTGATGGAGTCGATGTTCTCTCCGTCTCCCTCGGCGGACACGCCAGAGATTATGCCGACGACGCAATCGCCATAGGGACCTTCCATGCAGTTCAACATGGCATTACCGTCGTTTGTTCTGCTGGAAACTCCGGACCAACTCCAGGCTCCGTGTCAAATGTCGCACCATGGATGATAACCGTGGGAGCTAGCACAATCGATAGGGCTTTTACCAGTTATATCGCCCTCGGAAACAAGAAGCATTTCAAGGGTGCAAGTCTTTCCGATAAAATATTGCCAGCTCAAAAGTTCTATCCATTGATCAGTTCGGTAGATGCGAAGAAAGCTAACAACGTCTCTAACAACGACGCGAAACTATGTGAGGAAGGGTCTCTTGATCCTGAAAAGGCAAAGGGGAAGATTGTAGTTTGCCTTAGAGGGGACAATTCAAGAGTGGAAAAGGGTTATGTGGCTGCTCAAGCAGGTGCTGTTGGGATGATTCTTGTTAATGACAAGCAAAATGGGGATGAGATTTTATCTGATCCACACTTCCTTCCTGTTTCTCATATAAGCTATAGTGATGGTGAATTAGTCTATCAATACATCAACACTACCAAAATTCCGATGGCTTTCATGACTAGCGTAAGAACAGAGTTGGGAGTGAAACCTGCACCATTCATGGCTGCATTCTCATCAAGAGGTCCCAACACAATCGAGGCCTCACTACTCAAGCCTGATATAACAGCACCAGGTGTGAATATAATAGCGGCTTTCGCAGAAGATATATCACCAACTGGTGCAGATTATGATGAACGTCGGGTTCCATTTAATGTCGAATCTGGGACTTCCATGTCATGCCCTCACATTTCTGGTATTGTTGGCCTTCTCAAAACCCTTTATCCTAAATGGAGTCCTGCAGCTATCAGATCTGCCATTATGACCACCGCTGGAACGAAAGCCAATGACTTAAACCCAATTCTAAGCACTAGCCAGGAGAAAGCAAACCCATTGGCGTACGGAGCAGGGCATGTGAATCCAAACAAAGCAGCAAATCCAGGCCTAGTTTACGACCTCACCACCAAGGACTACTTAAACTTCTTATGCGCTCGAGGCTACAACAAGAAAAAAATGAAGCAATTCACCAACACAACATTCGTTTGTTCTAAGACCTTCAAATTAACTGATTTGAACTACCCATCCATCTCCATCCCGGATCTGAAATCCGAGACGGAGACAGTGAAAGTCAAGAGAAGAGTGAAGAACGTGGGAACTCCGGGCAGTTACGTCGCCGATATCAAGGCCCCGCCCGGAGTATCGGTTTCGGTCGAGCCGAGTACGTTGAAGTTTACTGGAGTTGGTGAAGAGAAGAGTTTCAGAGTTGTGTTCAAGAGGGTGCCCAATGATTATCATCGAGGCTATGTGTTTGGGAGACTTGCTTGGATCGATGGGAAGCATCGTGTTAGAACTCCCATTGTGGTCAATTTGGGATAG 2364 45.22 MEPFTFNPSSLLLLFFLFALLQTSTIAAAKKANIDEIVLLLVQSYIVYLGSHSHGLNPSEFDIQFATDSHYNLLGSFLGSNEAAKEAIFYSYNRHINGFAAVLDQKVAEDLANHPDVVSVHENKERKLHTTNSWSFLGLEKDGGIPSNSLWNVASFGESTIIANLDTGVWPESKSFDDKGYGPIPTRWKGSCEGGSNFHCNRKLIGARYFNKGYASVVGPLNASFETARDHEGHGTHTLSTAGGNLVSGANVFGKGNGTAKGGSPKALVAAYKVCWPQLFLFGGCFESDILAGIEAAITDGVDVLSVSLGGHARDYADDAIAIGTFHAVQHGITVVCSAGNSGPTPGSVSNVAPWMITVGASTIDRAFTSYIALGNKKHFKGASLSDKILPAQKFYPLISSVDAKKANNVSNNDAKLCEEGSLDPEKAKGKIVVCLRGDNSRVEKGYVAAQAGAVGMILVNDKQNGDEILSDPHFLPVSHISYSDGELVYQYINTTKIPMAFMTSVRTELGVKPAPFMAAFSSRGPNTIEASLLKPDITAPGVNIIAAFAEDISPTGADYDERRVPFNVESGTSMSCPHISGIVGLLKTLYPKWSPAAIRSAIMTTAGTKANDLNPILSTSQEKANPLAYGAGHVNPNKAANPGLVYDLTTKDYLNFLCARGYNKKKMKQFTNTTFVCSKTFKLTDLNYPSISIPDLKSETETVKVKRRVKNVGTPGSYVADIKAPPGVSVSVEPSTLKFTGVGEEKSFRVVFKRVPNDYHRGYVFGRLAWIDGKHRVRTPIVVNLG 787
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 20233741 20240716 - Tan0020181.1 Tan01g1883 739307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g1883 787 PRINTS Subtilisin serine protease family (S8) signature 230 243 IPR015500 -
Tan01g1883 787 PRINTS Subtilisin serine protease family (S8) signature 571 587 IPR015500 -
Tan01g1883 787 PRINTS Subtilisin serine protease family (S8) signature 157 176 IPR015500 -
Tan01g1883 787 ProSiteProfiles Serine proteases, subtilase domain profile. 133 641 - -
Tan01g1883 787 SUPERFAMILY PA domain 425 500 IPR046450 -
Tan01g1883 787 Pfam Subtilase family 157 633 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Tan01g1883 787 CDD Peptidases_S8_3 127 607 IPR034197 -
Tan01g1883 787 SUPERFAMILY Protease propeptides/inhibitors 44 127 - -
Tan01g1883 787 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 45 782 IPR045051 -
Tan01g1883 787 Gene3D Peptidase S8/S53 domain 160 654 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Tan01g1883 787 Gene3D - 365 510 - -
Tan01g1883 787 FunFam Subtilisin-like protease SBT1.5 159 388 - -
Tan01g1883 787 CDD PA_subtilisin_like 371 502 - -
Tan01g1883 787 ProSitePatterns Serine proteases, subtilase family, serine active site. 572 582 IPR023828 -
Tan01g1883 787 Pfam Fibronectin type-III domain 686 784 IPR041469 -
Tan01g1883 787 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 42 129 IPR037045 -
Tan01g1883 787 Pfam Peptidase inhibitor I9 44 129 IPR010259 -
Tan01g1883 787 FunFam subtilisin-like protease SBT1.5 365 510 - -
Tan01g1883 787 Gene3D - 658 786 - -
Tan01g1883 787 FunFam Subtilisin-like protease SBT1.5 658 787 - -
Tan01g1883 787 Pfam PA domain 414 487 IPR003137 -
Tan01g1883 787 FunFam Subtilisin-like protease SBT5.3 40 129 - -
Tan01g1883 787 SUPERFAMILY Subtilisin-like 128 645 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g1883 Tan-Chr1:20233741 Tan01g1887 Tan-Chr1:20279255 4.60E-300 dispersed
Tan01g1883 Tan-Chr1:20233741 Tan01g1884 Tan-Chr1:20247615 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g1883 - - - 0.0