Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g1884 ATGGAGGCTTTCAATCTATCTTCATTGCTTCTGTTGTTCTTTCTTTTTGCTTTGTTGCAAACATCCACCATTGCCACCAAGAAGTCTTACATTGTTTACTTGGGATCACATTCACATGGGTTGAATCCTTCTCCGGTCGATCTCCAAATCGCAACCGAATCTCACTACAGTTTACTCGGGTCGTTGTTAGGAAGCAATGAGGCAGCTAAGGACTCAATTTTCTACTCCTACAATAGACATATCAATGGCTTTGCAGCCATTCTTGATCAGAAAGTTGCAGAAGATCTAGCAAAACATCCTGCTGTGGCGTCGATCAATGAGAACAAAGGAAGAAAACTGCACACAACAAGTTCATGGAACTTTCTTGGAGTCGAGCGCGATGATGGAATTCCTGCAAACTCTATTTGGAATGTTGCAAGTTTTGGTGAATCTACCATCATTGCCAACCTTGACACAGGCGTTTGGCCAGAATCAAAGAGTTTCAGTGATGAAGGATATGGACCTGTTCCCACAAGGTGGAAGGGAAGTTGTGAGGGTGGCTCCAAATTTCATTGCAACAGGAAGCTGATTGGAGCGAGATATTTCAACAAAGGCTATGCAGCCTATGTGGGATCCCTCAATGCCAGCTATGAAACGGCAAGGGACCATGATGGCCATGGAACACACACTTTATCCACTGCTGGAGGCAATTTCATTTCAGGAGCTAGCGTTTTTGGGAATGGCAATGGCACTGCAAAAGGCGGTTCCCCGAAAGCCCGTGTCGCTGCCTATAAGGTATGCTGGCCTCAACTGTCCTCTAGTGGTGGGTGTTTTGATGCAGATATCCTAGCTGCCATCGAATCTGCTATTAGCGATGGAGTTGACGTTCTCTCATTATCACTCGGTGGAGATTCGAGAGATTTTTTCGATGATGTAATGGCCATCGGGGCCTTCCATGCAGTTCAACATGGTATCCTTGTTGTTTGCTCTGCTGGAAACTCAGGACCAGATCTAGGGACTGTACAAAATGTGGCACCCTGGCTTGTAACTGTAGCTGCTAGCACAATCAACAGACAGTTTACCAATTATGTGGCTCTTGGAAACAAAAAGCATATCAAGGCTGCAAGTCTTTCTGATAAAATATTGCCAGCTCAGAAGTTCTATCCGTTGATCAGTGCTGCAGATGCAAAAGCCAACAATGTCTCCGTTGACGACGCCAAACTGTGTGAGGAGGGGTCTATTGATCCTGAAAAGGTAAAAGGGAAGATCATAGTTTGCCTTAGAGGGGAAAATGCAAGAGTGGACAAGGGTTATGTGGCTGCTCAAGCAGGTGCTGTTGGGATGATTCTTGCTAATGACAAGCAAAATGGGGATGAACTTATAGCTGATGCACACCTACTTCCTGCTTCCCATGTAAGCTATACTGATGGAAGCTCAGTCTACCAATACATTAACTCCACCAAAACTCCAATGGCTTACATGACTCACGTAAGGACAGAGCTGGGAATCAAACCAGCACCATTCATGGCTTCATTCTCATCAAGAGGTCCCAATACAATCGAAGAATCGATACTCAAGCCTGATATAACAGCTCCGGGTGTCAATATACTCGCATCCTACTCCGAAGATACATCACCTAGCGGTTCATCATTCGATAACCGTCGAATTCCATTCAATATAATATCTGGTACTTCCATGTCATGCCCCCACATTTCTGGCATTGTTGGGCTTCTCAAGACCCTTTATCCAAAATGGAGTCCAGCAGCAATCAAATCTGCAATCATGACCACAGCTGAAACCAGAGCCAATGACTTACATCCAATACAAAACACAATCAATCACAAAGCCAACCCATTAGCATACGGAGCAGGACATGTCCATCCCAACAGAGCAGTGAATCCAGGCCTTGTTTATGACCTTACCATCAAGGACTACTTGAATTTCTTATGTGCTCGAGGCTACAACGAAACCCAAATCAGCAAATTCTCCAATACATCATTCGTTTGTTCGAAGTCATTCAAAGTAACAGATTTGAACTACCCATCGATCGCTGTAGCCAACCTGAAATCAGGCACTGTGAGAATCAAAAGAAGAGTTAAGAATGTGGGAAGCCCAAGCACGTATGTTGCTCGAGTGAAGGTACCTCCAGGAGTTTCAGTTTCAGTTAAGCCAAGTACACTGAAGTTTACTGGAATTGAGGAAGAGAAGAGTTTTGAAGTTGAACTGAGGAGGAATGTGGGAAACAAGCAGCATCGGGGCTATGTGTTTGGGTCGTTGGCTTGGTCAGATGGGAAGCACCATGTGAGAAGTCCAATTGCAGTGAATTTGGGATGA 2313 44.79 MEAFNLSSLLLLFFLFALLQTSTIATKKSYIVYLGSHSHGLNPSPVDLQIATESHYSLLGSLLGSNEAAKDSIFYSYNRHINGFAAILDQKVAEDLAKHPAVASINENKGRKLHTTSSWNFLGVERDDGIPANSIWNVASFGESTIIANLDTGVWPESKSFSDEGYGPVPTRWKGSCEGGSKFHCNRKLIGARYFNKGYAAYVGSLNASYETARDHDGHGTHTLSTAGGNFISGASVFGNGNGTAKGGSPKARVAAYKVCWPQLSSSGGCFDADILAAIESAISDGVDVLSLSLGGDSRDFFDDVMAIGAFHAVQHGILVVCSAGNSGPDLGTVQNVAPWLVTVAASTINRQFTNYVALGNKKHIKAASLSDKILPAQKFYPLISAADAKANNVSVDDAKLCEEGSIDPEKVKGKIIVCLRGENARVDKGYVAAQAGAVGMILANDKQNGDELIADAHLLPASHVSYTDGSSVYQYINSTKTPMAYMTHVRTELGIKPAPFMASFSSRGPNTIEESILKPDITAPGVNILASYSEDTSPSGSSFDNRRIPFNIISGTSMSCPHISGIVGLLKTLYPKWSPAAIKSAIMTTAETRANDLHPIQNTINHKANPLAYGAGHVHPNRAVNPGLVYDLTIKDYLNFLCARGYNETQISKFSNTSFVCSKSFKVTDLNYPSIAVANLKSGTVRIKRRVKNVGSPSTYVARVKVPPGVSVSVKPSTLKFTGIEEEKSFEVELRRNVGNKQHRGYVFGSLAWSDGKHHVRSPIAVNLG 770
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 20247615 20250900 - Tan0002772.1 Tan01g1884 739308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g1884 770 FunFam subtilisin-like protease SBT1.5 350 494 - -
Tan01g1884 770 Pfam Fibronectin type-III domain 670 767 IPR041469 -
Tan01g1884 770 FunFam Subtilisin-like protease SBT1.5 144 375 - -
Tan01g1884 770 FunFam Subtilisin-like protease SBT1.5 642 770 - -
Tan01g1884 770 Gene3D - 350 494 - -
Tan01g1884 770 PRINTS Subtilisin serine protease family (S8) signature 215 228 IPR015500 -
Tan01g1884 770 PRINTS Subtilisin serine protease family (S8) signature 555 571 IPR015500 -
Tan01g1884 770 PRINTS Subtilisin serine protease family (S8) signature 142 161 IPR015500 -
Tan01g1884 770 Pfam Subtilase family 142 598 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Tan01g1884 770 Pfam PA domain 398 471 IPR003137 -
Tan01g1884 770 CDD Peptidases_S8_3 112 591 IPR034197 -
Tan01g1884 770 FunFam Subtilisin-like protease SBT5.3 19 114 - -
Tan01g1884 770 ProSiteProfiles Serine proteases, subtilase domain profile. 118 625 - -
Tan01g1884 770 Gene3D Peptidase S8/S53 domain 145 638 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Tan01g1884 770 Pfam Peptidase inhibitor I9 29 114 IPR010259 -
Tan01g1884 770 SUPERFAMILY Subtilisin-like 113 629 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Tan01g1884 770 CDD PA_subtilisin_like 356 485 - -
Tan01g1884 770 Gene3D - 642 769 - -
Tan01g1884 770 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 114 IPR037045 -
Tan01g1884 770 ProSitePatterns Serine proteases, subtilase family, serine active site. 556 566 IPR023828 -
Tan01g1884 770 SUPERFAMILY PA domain 409 490 IPR046450 -
Tan01g1884 770 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 30 765 IPR045051 -
Tan01g1884 770 SUPERFAMILY Protease propeptides/inhibitors 28 109 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g1884 Tan-Chr1:20247615 Tan01g1887 Tan-Chr1:20279255 2.10E-297 dispersed
Tan01g1883 Tan-Chr1:20233741 Tan01g1884 Tan-Chr1:20247615 0.00E+00 tandem
Tan01g1884 Tan-Chr1:20247615 Tan01g1885 Tan-Chr1:20255664 1.40E-269 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g1884 - - - 0.0