Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g1885 ATGGCTTTCCATATACATAGTAAAAAATTAGCTGAGGAAGCAATTTTCTATTCCTATACGAGATGTTTCAATGGTTTTGCAGCCACACTCGATGAGAAAGAAGCAGCTGATGTAGCGAGAAGTCCAGAGGTTATATCAGTGTTTGAAAACAAAGGAAGAAAAATGCACACCACAAACTCATGGAATTTTCTTGGGGTGGAAAGTGAAGAAGGAGTTCCTTCCAACTCCATTTGGAATGCAGCAAAGTTTGGTCAAGATATGATCATAGCCAACATCGACACTGGTGTTTGGCCGGAATCAGAGAGCTTTAGCGACGAAGGGTATGGACCAGTCCCATCAAAGTGGCGAGGCACGTGTCCAAACAATCCCAACTTCTGCTGTAATAGGAAGCTTATTGGAGGAAGGTATTTCTACAAAGGATATGAAGCCGCCGGAGGCATTCTCAACGCCACTTCAATTTCCCTACGTGACCACAGCGGCCATGGAACCCACACTCTCTCTACCGCCGCCGGCAACTTTGTTTCCGGAGCCAACATTTTCGGCCACGGCAACGGTACGGCCAAAGGCGGCGCTCCAAAAGCCCGCGTCGCCGCCTACAAGGCCTGCTGGCCTGCTTTATCCTCCGGAGAGTGCTTCGATGCCGATAGCCTCGCCGCCTTCGAAGCCGCCGTCGCCGACGGAGTCGACGTCATATCCGCTTCCATCGGTGGAGGCGACCAAGAATTCCGCAACGATCCGCTAGCTATCGCCGCCTTCCACGCCGTTCAACAAGGCATCGTCGTCGTCTGCTCCGCCGGCAACGCCGGTCCTCTTATGCAGACCGTCTCCAACGTCGTGCCCTGGGAGATCACCGTCGCGGCGAGCACCAGCGGCAGAGATTTCGTCAGTTACGTCGTCCTTGGAAATAACAAAAGTCTAAAGGGCGCAAGCCTTTCTTCAATTGCCGCATTACCACAGTTCTATCCATTGATCGATTCTGTGGATGCGAAATTGAGCAACGTCAGCGATGACCAAGCGCAATTTTGTGGTGAGGGAACGCTTGATCCGAACAAGGTAAAGGGGAAGATCTTGATTTGCGTTGCAGGGGAGCTTGCAGGGATTGACAAGGGTTACCATGCTGCTCAAGCAGGTGCTGTGGGGATGATTATGGCTAACGATGTTGAAAAAGTGGAGGAACTCAAACCTGAGTTGCATTTCCTTCCAGCTTCTGATATAACCTATATCGATGCCGAATTGCTTTACCAGTACATCAACTCCACCAGTACACCAGTGGCTCAGATAATGAATGTAAGGACAGATGTGGGACTAAAACCAGCTCCAGTCGTTGCTTCATTCTCATCCAGAGGTCCCAACCCATTAGAGAAGTCCATTCTCAAGCCTGACATAACAGCTCCGGGTGTGAACATACTGGCGTCTTACCCCACCGGAAGAGCCCCAACCCGTTCCCTCTATGACCGACGGCGCACCCCGTTTAATGTACTAGCCGGTACCTCCATGGCTTGCCCTCACATTGCAGGCATTGCAGCCCTTCTCAAGTCCATTCATCCCAAATGGAGCCCTGCTGCAATCAAATCTGCCCTTATGACCACTGCCACAACAAGTGATAACAACTTGCAATCGATTCTCAACTTGACCAAACTCGAAACCACCCCATTTGCTTATGGGGCAGGACATGTCCGCCCGAACGATGCAATGGACCCTGGCCTTGTTTATGATGCTACTGTCGATGACTATTTAAATTTCTTGTATGCTCGAGGCTACAATGCAAGTGAAATCAGGAGATTCTATGAGAAGCCATTTGTTTGTGTGAAATCATTCAAACTCACAGATCTCAACTACCCATCTATCTCAATTCCGAGTCTAAATGCGGGTGCTCCTGTAACAATCAATAGAAGAGTTAAGAATGTGGGAAGTCCAGGCACGTACATGGCCCGAGTCGAGGTGCCACCGGGCGTTACTGTATCGGTTGAGCCAAGTACGTTGCAGTTTAGCAGTGTGGGTGAAGAGAAGGCATTCAAGGTCGTAGTGCAATACACAGGAAAAGTGAAACATGAAGGCTATGTGTTCGGGACATTGATATGGTCTGATGGGAAGCATTTTGTAAGAAGTCCTATTGCAATGAATTTGGGACAATGA 2136 49.49 MAFHIHSKKLAEEAIFYSYTRCFNGFAATLDEKEAADVARSPEVISVFENKGRKMHTTNSWNFLGVESEEGVPSNSIWNAAKFGQDMIIANIDTGVWPESESFSDEGYGPVPSKWRGTCPNNPNFCCNRKLIGGRYFYKGYEAAGGILNATSISLRDHSGHGTHTLSTAAGNFVSGANIFGHGNGTAKGGAPKARVAAYKACWPALSSGECFDADSLAAFEAAVADGVDVISASIGGGDQEFRNDPLAIAAFHAVQQGIVVVCSAGNAGPLMQTVSNVVPWEITVAASTSGRDFVSYVVLGNNKSLKGASLSSIAALPQFYPLIDSVDAKLSNVSDDQAQFCGEGTLDPNKVKGKILICVAGELAGIDKGYHAAQAGAVGMIMANDVEKVEELKPELHFLPASDITYIDAELLYQYINSTSTPVAQIMNVRTDVGLKPAPVVASFSSRGPNPLEKSILKPDITAPGVNILASYPTGRAPTRSLYDRRRTPFNVLAGTSMACPHIAGIAALLKSIHPKWSPAAIKSALMTTATTSDNNLQSILNLTKLETTPFAYGAGHVRPNDAMDPGLVYDATVDDYLNFLYARGYNASEIRRFYEKPFVCVKSFKLTDLNYPSISIPSLNAGAPVTINRRVKNVGSPGTYMARVEVPPGVTVSVEPSTLQFSSVGEEKAFKVVVQYTGKVKHEGYVFGTLIWSDGKHFVRSPIAMNLGQ 711
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 20255664 20263096 - Tan0012951.1 Tan01g1885 739309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g1885 711 SUPERFAMILY PA domain 345 423 IPR046450 -
Tan01g1885 711 Pfam Peptidase inhibitor I9 9 56 IPR010259 -
Tan01g1885 711 ProSiteProfiles Serine proteases, subtilase domain profile. 60 565 - -
Tan01g1885 711 Gene3D Peptidase S8/S53 domain 86 578 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Tan01g1885 711 Gene3D - 291 434 - -
Tan01g1885 711 CDD PA_subtilisin_like 297 427 - -
Tan01g1885 711 ProSitePatterns Serine proteases, subtilase family, serine active site. 496 506 IPR023828 -
Tan01g1885 711 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 2 56 IPR037045 -
Tan01g1885 711 Pfam Fibronectin type-III domain 610 706 IPR041469 -
Tan01g1885 711 FunFam Subtilisin-like protease SBT1.5 582 709 - -
Tan01g1885 711 FunFam Subtilisin-like protease SBT1.5 86 315 - -
Tan01g1885 711 FunFam subtilisin-like protease SBT1.5 291 434 - -
Tan01g1885 711 Pfam PA domain 340 412 IPR003137 -
Tan01g1885 711 Pfam Subtilase family 84 537 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Tan01g1885 711 SUPERFAMILY Subtilisin-like 55 569 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Tan01g1885 711 CDD Peptidases_S8_3 54 532 IPR034197 -
Tan01g1885 711 Gene3D - 582 709 - -
Tan01g1885 711 PRINTS Subtilisin serine protease family (S8) signature 495 511 IPR015500 -
Tan01g1885 711 PRINTS Subtilisin serine protease family (S8) signature 157 170 IPR015500 -
Tan01g1885 711 PRINTS Subtilisin serine protease family (S8) signature 84 103 IPR015500 -
Tan01g1885 711 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 12 705 IPR045051 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g1885 Tan-Chr1:20255664 Tan01g1887 Tan-Chr1:20279255 1.00E-261 dispersed
Tan01g1884 Tan-Chr1:20247615 Tan01g1885 Tan-Chr1:20255664 1.40E-269 tandem
Tan01g1885 Tan-Chr1:20255664 Tan01g1886 Tan-Chr1:20267044 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g1885 - - - 0.0