Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g1886 ATGCTCAAATCTTTTATGTTCATTTCTTCATTGTTCATTCTTTTTTTCGTGGTGGGTGCAATGGCCCAGGAAGCGATTTTCTACTCCTATACTAGAAGTTTCAATGGTTTCGCAGCCATACTTGATGAGAAAGAAGCAGCAGATCTAGCAAGAAACCCTAAGGTGATATCAGTGTTTGAAAACAAGGCAAGAAAATTGCACACAACACGTTCATGGAATTTCCTTGGGCTGGAGAACGAAGCTGGGATTCCTTCAAACTCCATTTGGAATGCTGCTAAGTTTGGTGAAGATGTCATTGTAGCCAACATCGATACAGGTGTTTGGCCAGAATCAAAGAGCTTTAGTGATGAAGGATATGGACCTGTGCCATCCAAGTGGCGGGGCATTTGTCAAACTGACTCCAATTTTCATTGCAACAAAAAGCTTATTGGAGGAAGATATTTTCACAAAGGATATGTAGCCGCCGGAGGCGTTCTCAACGCCAGTTTGCTCACAGTACGCGACCACGATGGCCATGGAACCCACACTCTCTCCACCGCCGCCGGAAACTTTGTCGCCGGAGCCAATGTTTTTGGCCATGGAAACGGCACGGCCAAAGGCGGTGCTCCAAAAGCCCGCGTCGCCGCCTACAAGGTCTGCTGGCCTCCATTCAGGGACGGAGAGTGCTACGACGCCGATATGCTCGCCGCCTTCGAAGCCGCCATCGCCGACGGAGTCGACGTCATATCGGCTTCCATTGGTAGATCCTCCGATGAATTTTACAACGATCTACTCGCTATGATCTCTTTCCAGGCCGTTCAACAAGGCGTTGTCGTCGTCTTCTCCGCTGGCAACTCTGGTCCTATTCCGGGAACCGTCAGCAATGTCGAGCCTTGGGTGATCACTGTCGCGGCGAGCACCATCGACAGAGATTTCGCCAGTTATGTCGCGCTTGGAAATAAGAAACACCTAAAGGGTGTAAGTCTTTCATCAATTGCCCCATTACCTAAGAAGTTCTATCCATTGATCCTTTCTTTGGATGCAAGATTAAGCAATGTTACCGATTTCCATGGGCAATTTTGTGGCGAGGGGACGCTTGATCCGATCAAGGTGAAGGGGAAGATCTTGGTTTGTCTTTCAGGGGAGACTGAAGGGATTGATAAGGGCTACCAGGCTGCTCGAGCAGGTGCTGTGGGAATGATTATGGCTAACGATTTGCAAACAGGGGACGAAATCTTTCCGGAGTTGCACTACATTCCAGCTACTGATATTACCAATAAAGATTCTCAATTGCTCCAACAATACGTCGATTCCACCAAGACACCAATGGCTCATTTAACGAAGGTGAAGACTGAGTTGGGATTAAAACCAGCTCCAGTCATGGCTACCTTCTCATCCAGAGGCCCCAACCCAGTAGCGAGCTCCATCCTCAAGCCTGACATAACTGCGCCGGGTGTGAACATATTGGCGTCTTACCCCACTGGAACTGCCCCATCCATTTCGGTCACCGACAAACGACGCATCCCTTTTAATGTAATCTCCGGCACCTCCATGTCCTGCCCTCACATTTCCGGCATCGCCGCCCTTCTCAAGTCCATTCATCCCAATTGGAGCCCTTCTGCCATTAAATCTGCCATTATGACCACTGCCAAAACACGAGACAACAACTTGCAATCGATCCTCGACTCGAACAAACTCAAAGCCACCCCACTTGCTTATGGCGCAGGACATGTTAATCCGAACGCAGCAATGGACCCTGGCCTTGTTTATGATGCTACATTCGAGGATTACTTGAACTTCTTGTGTGCTCGAGGCTACAACGCAATGGAAATCAGGAAATTCTACGAGAAGCCATTCAGTTGTGACAAATCATTCCATGTCACAGATCTCAACTACCCGTCGATCTCCATTGGGGATTCATTGAAAATTGGTGCAAAAGTGACAATCAATAGGAGAGTTAAGAATGTGGGAAGTCCAGGCACATATGTGGCGCGGGTCAAGGTGTCCCCAGGAGTTGCGGTTTCGGTCGAGCCGAGCTCGTTGCAGTTTAGCAGAGTGGGAGAAGAGAAGGCCTTCAAGGTCGTGTTGCAAAACACAGGAAAAGTGAAACGTACTGGCTATGTGTTTGGAACATTGATTTGGTCTGATGGGAAGCATTTTGTTAGAAGTCCTATTGCAATCAATTTCGGATAA 2172 48.3 MLKSFMFISSLFILFFVVGAMAQEAIFYSYTRSFNGFAAILDEKEAADLARNPKVISVFENKARKLHTTRSWNFLGLENEAGIPSNSIWNAAKFGEDVIVANIDTGVWPESKSFSDEGYGPVPSKWRGICQTDSNFHCNKKLIGGRYFHKGYVAAGGVLNASLLTVRDHDGHGTHTLSTAAGNFVAGANVFGHGNGTAKGGAPKARVAAYKVCWPPFRDGECYDADMLAAFEAAIADGVDVISASIGRSSDEFYNDLLAMISFQAVQQGVVVVFSAGNSGPIPGTVSNVEPWVITVAASTIDRDFASYVALGNKKHLKGVSLSSIAPLPKKFYPLILSLDARLSNVTDFHGQFCGEGTLDPIKVKGKILVCLSGETEGIDKGYQAARAGAVGMIMANDLQTGDEIFPELHYIPATDITNKDSQLLQQYVDSTKTPMAHLTKVKTELGLKPAPVMATFSSRGPNPVASSILKPDITAPGVNILASYPTGTAPSISVTDKRRIPFNVISGTSMSCPHISGIAALLKSIHPNWSPSAIKSAIMTTAKTRDNNLQSILDSNKLKATPLAYGAGHVNPNAAMDPGLVYDATFEDYLNFLCARGYNAMEIRKFYEKPFSCDKSFHVTDLNYPSISIGDSLKIGAKVTINRRVKNVGSPGTYVARVKVSPGVAVSVEPSSLQFSRVGEEKAFKVVLQNTGKVKRTGYVFGTLIWSDGKHFVRSPIAINFG 723
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 20267044 20273798 - Tan0021082.1 Tan01g1886 739310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g1886 723 Gene3D - 594 722 - -
Tan01g1886 723 ProSitePatterns Serine proteases, subtilase family, serine active site. 508 518 IPR023828 -
Tan01g1886 723 Pfam Peptidase inhibitor I9 22 67 IPR010259 -
Tan01g1886 723 FunFam Subtilisin-like protease SBT1.5 594 722 - -
Tan01g1886 723 SUPERFAMILY Subtilisin-like 66 581 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Tan01g1886 723 SUPERFAMILY PA domain 354 432 IPR046450 -
Tan01g1886 723 FunFam subtilisin-like protease SBT1.5 302 446 - -
Tan01g1886 723 PRINTS Subtilisin serine protease family (S8) signature 507 523 IPR015500 -
Tan01g1886 723 PRINTS Subtilisin serine protease family (S8) signature 95 114 IPR015500 -
Tan01g1886 723 PRINTS Subtilisin serine protease family (S8) signature 168 181 IPR015500 -
Tan01g1886 723 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 10 67 IPR037045 -
Tan01g1886 723 Gene3D Peptidase S8/S53 domain 97 590 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Tan01g1886 723 FunFam Subtilisin-like protease SBT1.5 97 316 - -
Tan01g1886 723 CDD PA_subtilisin_like 308 437 - -
Tan01g1886 723 Gene3D - 302 446 - -
Tan01g1886 723 CDD Peptidases_S8_3 65 543 IPR034197 -
Tan01g1886 723 Pfam Subtilase family 95 549 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Tan01g1886 723 ProSiteProfiles Serine proteases, subtilase domain profile. 71 577 - -
Tan01g1886 723 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 23 718 IPR045051 -
Tan01g1886 723 Pfam PA domain 346 424 IPR003137 -
Tan01g1886 723 Pfam Fibronectin type-III domain 622 720 IPR041469 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g1886 Tan-Chr1:20267044 Tan09g0366 Tan-Chr9:34350106 2.00E-241 dispersed
Tan01g1885 Tan-Chr1:20255664 Tan01g1886 Tan-Chr1:20267044 0.00E+00 tandem
Tan01g1886 Tan-Chr1:20267044 Tan01g1887 Tan-Chr1:20279255 8.00E-275 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g1886 - - - 0.0