Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan01g1887 | ATGAAATTTGATGAAGGAAAAATCTATAGTTCTTACATTGTTTATTTGGGAACACACTCCTTTGGATCGAACCCTAGTATATATGATACCCAACTTGCAACCGAGTCCCAATATGAAATATTAGGAACAGTCATGGAAAGCAAAATGGCAGCCAAAGAATCAATTATCTACTCGTATAATAGATACATTAATGGTTTTGCTGCCGTACTTGATGAAAAAGAAGCCACGGCTCTTGCAAAGAATCCGAATGTGGTGTCAGTTTTTGAAAACAAGGAAAGAAAATTGCATACAACACGATCATGGAGATTTCTTGGGATGGAAGATGATGGAGGAATTCCTTCAAACTCCATTTGGAAGGCTGCTAGGTTCGGGGAAGATACAATTATAGGCAACCTCGACACGGGTGCTTGGCCAGAGTCGAAGAGCTTCAATGATGCAGGCTATGGCCCTGTACCTTCAAGGTGGAGGGGAGCTTGTGAAGGTGGCTCCAACTTTCAATGCAACAAGAAGTTGATTGGAGCAAGATATTTCTACCAAGGATTTGCAATGACACATGGTCCTCTAAACATTAGCCTCCACACTGCAAGAGACCACGAAGGGCATGGATCGCACACTTTGTCCACGGCCGGTGGCAACTTTGTCCCTGGAGTCAATGTCTTTGGCAATGGCAATGGGACTGCAAAAGGAGGTTCTCCCAAAGCTCGTCTTGCTGCCTACAAGGTCTGCTGGCCTTCTAACAAAGATGGCGGCTGTTTCGACTCCGACATCTTAGCCGGTTTCGAAGCTGCTATTAGCGACGGTGTCGATGTTCTCTCCGTCTCTCTCGGTGCAGCCGCTCAAGAGTTTGCTTATGACTCTCTTTCCATTGGGGCCTTCCATGCCATTCAACAAGGAATTGTCGTCGTTTGCTCGGCTGGAAACGACGGTCCCTCTCCAGGGACTGTAAGCAATGTATCTCCTTGGATGTTCACTGTTGGAGCTAGCTCCATCGACCGAGATTTCTCCAGTTATGTTGCCCTCGGAAACAAGAAACATTTCAAGGGTTCTAGTCTTTCATCAAAAGGATTACCAGGTGGTAAGTTCTACCCTTTGATCAATGCTGTGGAAGCAAAAGCTGGCAATGCCTCTGACACCCTTGCCCAACTTTGCGAGGAGGGATCACTTGATCCCACAAAGGCAAAAGGGAAGATTATAGTTTGTCTTAGAGGAGACAATGGTCGAGTGGACAAAGGTTTCGAGGTTCTTCGTGTCGGTGGTGTCGGTATGATTCTGGCAAACGATGAGAAAGATGGATCAACCATTATGGTTGATCCACACTTACTTCCTGCTTCTCATGTAAGCTATGTTGATGGACTTTCTATAGCTCAATATATAAACTCCACCAAAACACCCGTGGCTTTCCTAACCCATGTAAGAACAGAGCTGGGAATTAAACCATCACCAGTCATGGCTTCATTCTCATCAAGAGGCCCTAATCCCATCACAGAGTCCGTGATCAAGCCTGATATAACAGCACCGGGTGTGAGTATAATCGCATCTGTCACAGAAGATGTAACAGCAACAGATTTGCCATTCGATACCCGTCGAGTGCCTTTTAACGTCGAATCTGGCACTTCCATGTCTTGTCCACACATCTCTGGTGTTGTAGGCCTTCTCAAAACTCTTTATCCCACATGGAGTCCAGCAGCTATCAAATCCGCCATCATGACTACAGCGAAAACAAGAGATAACACGAATATGCATTCAATATTATTGGACTCCACGAAAGTGGGGAAGGGAACCCCATTCGATTATGGAGCAGGACACGTCCATCCCAACAATGCAATGGACCCTGGCCTTGTTTACGATACGACCATTGACGACTACTTGAACTTCTTGTGCGCACGAGGCTACAACTCCCTCGCACTGAAGAAATTCTCGAACAACCAATTTGTTTGCGCCGAAGCATTCGCAATCACAGATCTCAACTACCCATCAATCTCGGTCCCGAAGTTGCAAATTGGTGCCCCATTCACCATCAATAGAAGAGTTAAGAATGTGGGAATTAGCGCAGGCACGTATGTGGCGCGGGTGAAGATGCCCAAAGGAGTTGCGGTTACGGTTGAGCCGAGTACGTTGCAGTTTAACAGTGTAGGTGAAGAGAAGGCTTTCAAGCTTGTATTTCAATGCAATTCAAAACTGCAACGTCAAGGCTATGTGTTTGGGACATTGGTATGGTCAGATGGGAAGCATTTTGTTAGAAGTCCCATTGCAGTCAAATTGGGTTGA | 2268 | 45.9 | MKFDEGKIYSSYIVYLGTHSFGSNPSIYDTQLATESQYEILGTVMESKMAAKESIIYSYNRYINGFAAVLDEKEATALAKNPNVVSVFENKERKLHTTRSWRFLGMEDDGGIPSNSIWKAARFGEDTIIGNLDTGAWPESKSFNDAGYGPVPSRWRGACEGGSNFQCNKKLIGARYFYQGFAMTHGPLNISLHTARDHEGHGSHTLSTAGGNFVPGVNVFGNGNGTAKGGSPKARLAAYKVCWPSNKDGGCFDSDILAGFEAAISDGVDVLSVSLGAAAQEFAYDSLSIGAFHAIQQGIVVVCSAGNDGPSPGTVSNVSPWMFTVGASSIDRDFSSYVALGNKKHFKGSSLSSKGLPGGKFYPLINAVEAKAGNASDTLAQLCEEGSLDPTKAKGKIIVCLRGDNGRVDKGFEVLRVGGVGMILANDEKDGSTIMVDPHLLPASHVSYVDGLSIAQYINSTKTPVAFLTHVRTELGIKPSPVMASFSSRGPNPITESVIKPDITAPGVSIIASVTEDVTATDLPFDTRRVPFNVESGTSMSCPHISGVVGLLKTLYPTWSPAAIKSAIMTTAKTRDNTNMHSILLDSTKVGKGTPFDYGAGHVHPNNAMDPGLVYDTTIDDYLNFLCARGYNSLALKKFSNNQFVCAEAFAITDLNYPSISVPKLQIGAPFTINRRVKNVGISAGTYVARVKMPKGVAVTVEPSTLQFNSVGEEKAFKLVFQCNSKLQRQGYVFGTLVWSDGKHFVRSPIAVKLG | 755 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 20279255 | 20285145 | - | Tan0009395.1 | Tan01g1887 | 739311 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan01g1887 | 755 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 537 | 547 | IPR023828 | - | |
Tan01g1887 | 755 | CDD | PA_subtilisin_like | 337 | 468 | - | - | |
Tan01g1887 | 755 | Gene3D | Peptidase S8/S53 domain | 126 | 622 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Tan01g1887 | 755 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 100 | 609 | - | - | |
Tan01g1887 | 755 | Pfam | Fibronectin type-III domain | 654 | 752 | IPR041469 | - | |
Tan01g1887 | 755 | Pfam | PA domain | 363 | 454 | IPR003137 | - | |
Tan01g1887 | 755 | Pfam | Peptidase inhibitor I9 | 11 | 96 | IPR010259 | - | |
Tan01g1887 | 755 | Gene3D | - | 331 | 475 | - | - | |
Tan01g1887 | 755 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 4 | 96 | IPR037045 | - | |
Tan01g1887 | 755 | FunFam | Subtilisin-like protease SBT5.3 | 2 | 96 | - | - | |
Tan01g1887 | 755 | Coils | Coil | 365 | 385 | - | - | |
Tan01g1887 | 755 | FunFam | Subtilisin-like protease SBT1.5 | 126 | 345 | - | - | |
Tan01g1887 | 755 | Pfam | Subtilase family | 194 | 587 | IPR000209 | GO:0006508(InterPro)|GO:0008236(InterPro) | |
Tan01g1887 | 755 | PRINTS | Subtilisin serine protease family (S8) signature | 197 | 210 | IPR015500 | - | |
Tan01g1887 | 755 | PRINTS | Subtilisin serine protease family (S8) signature | 124 | 143 | IPR015500 | - | |
Tan01g1887 | 755 | PRINTS | Subtilisin serine protease family (S8) signature | 536 | 552 | IPR015500 | - | |
Tan01g1887 | 755 | SUPERFAMILY | Subtilisin-like | 95 | 613 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Tan01g1887 | 755 | FunFam | subtilisin-like protease SBT1.5 | 331 | 475 | - | - | |
Tan01g1887 | 755 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 12 | 750 | IPR045051 | - | |
Tan01g1887 | 755 | CDD | Peptidases_S8_3 | 94 | 572 | IPR034197 | - | |
Tan01g1887 | 755 | Gene3D | - | 626 | 754 | - | - | |
Tan01g1887 | 755 | SUPERFAMILY | Protease propeptides/inhibitors | 37 | 93 | - | - | |
Tan01g1887 | 755 | FunFam | Subtilisin-like protease SBT1.5 | 626 | 755 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan01g1883 | Tan-Chr1:20233741 | Tan01g1887 | Tan-Chr1:20279255 | 4.60E-300 | dispersed | |
Tan01g1884 | Tan-Chr1:20247615 | Tan01g1887 | Tan-Chr1:20279255 | 2.10E-297 | dispersed | |
Tan01g1885 | Tan-Chr1:20255664 | Tan01g1887 | Tan-Chr1:20279255 | 1.00E-261 | dispersed | |
Tan01g1887 | Tan-Chr1:20279255 | Tan09g0366 | Tan-Chr9:34350106 | 1.00E-251 | dispersed | |
Tan01g1886 | Tan-Chr1:20267044 | Tan01g1887 | Tan-Chr1:20279255 | 8.00E-275 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan01g1887 | - | - | - | 0.0 |