Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g1887 ATGAAATTTGATGAAGGAAAAATCTATAGTTCTTACATTGTTTATTTGGGAACACACTCCTTTGGATCGAACCCTAGTATATATGATACCCAACTTGCAACCGAGTCCCAATATGAAATATTAGGAACAGTCATGGAAAGCAAAATGGCAGCCAAAGAATCAATTATCTACTCGTATAATAGATACATTAATGGTTTTGCTGCCGTACTTGATGAAAAAGAAGCCACGGCTCTTGCAAAGAATCCGAATGTGGTGTCAGTTTTTGAAAACAAGGAAAGAAAATTGCATACAACACGATCATGGAGATTTCTTGGGATGGAAGATGATGGAGGAATTCCTTCAAACTCCATTTGGAAGGCTGCTAGGTTCGGGGAAGATACAATTATAGGCAACCTCGACACGGGTGCTTGGCCAGAGTCGAAGAGCTTCAATGATGCAGGCTATGGCCCTGTACCTTCAAGGTGGAGGGGAGCTTGTGAAGGTGGCTCCAACTTTCAATGCAACAAGAAGTTGATTGGAGCAAGATATTTCTACCAAGGATTTGCAATGACACATGGTCCTCTAAACATTAGCCTCCACACTGCAAGAGACCACGAAGGGCATGGATCGCACACTTTGTCCACGGCCGGTGGCAACTTTGTCCCTGGAGTCAATGTCTTTGGCAATGGCAATGGGACTGCAAAAGGAGGTTCTCCCAAAGCTCGTCTTGCTGCCTACAAGGTCTGCTGGCCTTCTAACAAAGATGGCGGCTGTTTCGACTCCGACATCTTAGCCGGTTTCGAAGCTGCTATTAGCGACGGTGTCGATGTTCTCTCCGTCTCTCTCGGTGCAGCCGCTCAAGAGTTTGCTTATGACTCTCTTTCCATTGGGGCCTTCCATGCCATTCAACAAGGAATTGTCGTCGTTTGCTCGGCTGGAAACGACGGTCCCTCTCCAGGGACTGTAAGCAATGTATCTCCTTGGATGTTCACTGTTGGAGCTAGCTCCATCGACCGAGATTTCTCCAGTTATGTTGCCCTCGGAAACAAGAAACATTTCAAGGGTTCTAGTCTTTCATCAAAAGGATTACCAGGTGGTAAGTTCTACCCTTTGATCAATGCTGTGGAAGCAAAAGCTGGCAATGCCTCTGACACCCTTGCCCAACTTTGCGAGGAGGGATCACTTGATCCCACAAAGGCAAAAGGGAAGATTATAGTTTGTCTTAGAGGAGACAATGGTCGAGTGGACAAAGGTTTCGAGGTTCTTCGTGTCGGTGGTGTCGGTATGATTCTGGCAAACGATGAGAAAGATGGATCAACCATTATGGTTGATCCACACTTACTTCCTGCTTCTCATGTAAGCTATGTTGATGGACTTTCTATAGCTCAATATATAAACTCCACCAAAACACCCGTGGCTTTCCTAACCCATGTAAGAACAGAGCTGGGAATTAAACCATCACCAGTCATGGCTTCATTCTCATCAAGAGGCCCTAATCCCATCACAGAGTCCGTGATCAAGCCTGATATAACAGCACCGGGTGTGAGTATAATCGCATCTGTCACAGAAGATGTAACAGCAACAGATTTGCCATTCGATACCCGTCGAGTGCCTTTTAACGTCGAATCTGGCACTTCCATGTCTTGTCCACACATCTCTGGTGTTGTAGGCCTTCTCAAAACTCTTTATCCCACATGGAGTCCAGCAGCTATCAAATCCGCCATCATGACTACAGCGAAAACAAGAGATAACACGAATATGCATTCAATATTATTGGACTCCACGAAAGTGGGGAAGGGAACCCCATTCGATTATGGAGCAGGACACGTCCATCCCAACAATGCAATGGACCCTGGCCTTGTTTACGATACGACCATTGACGACTACTTGAACTTCTTGTGCGCACGAGGCTACAACTCCCTCGCACTGAAGAAATTCTCGAACAACCAATTTGTTTGCGCCGAAGCATTCGCAATCACAGATCTCAACTACCCATCAATCTCGGTCCCGAAGTTGCAAATTGGTGCCCCATTCACCATCAATAGAAGAGTTAAGAATGTGGGAATTAGCGCAGGCACGTATGTGGCGCGGGTGAAGATGCCCAAAGGAGTTGCGGTTACGGTTGAGCCGAGTACGTTGCAGTTTAACAGTGTAGGTGAAGAGAAGGCTTTCAAGCTTGTATTTCAATGCAATTCAAAACTGCAACGTCAAGGCTATGTGTTTGGGACATTGGTATGGTCAGATGGGAAGCATTTTGTTAGAAGTCCCATTGCAGTCAAATTGGGTTGA 2268 45.9 MKFDEGKIYSSYIVYLGTHSFGSNPSIYDTQLATESQYEILGTVMESKMAAKESIIYSYNRYINGFAAVLDEKEATALAKNPNVVSVFENKERKLHTTRSWRFLGMEDDGGIPSNSIWKAARFGEDTIIGNLDTGAWPESKSFNDAGYGPVPSRWRGACEGGSNFQCNKKLIGARYFYQGFAMTHGPLNISLHTARDHEGHGSHTLSTAGGNFVPGVNVFGNGNGTAKGGSPKARLAAYKVCWPSNKDGGCFDSDILAGFEAAISDGVDVLSVSLGAAAQEFAYDSLSIGAFHAIQQGIVVVCSAGNDGPSPGTVSNVSPWMFTVGASSIDRDFSSYVALGNKKHFKGSSLSSKGLPGGKFYPLINAVEAKAGNASDTLAQLCEEGSLDPTKAKGKIIVCLRGDNGRVDKGFEVLRVGGVGMILANDEKDGSTIMVDPHLLPASHVSYVDGLSIAQYINSTKTPVAFLTHVRTELGIKPSPVMASFSSRGPNPITESVIKPDITAPGVSIIASVTEDVTATDLPFDTRRVPFNVESGTSMSCPHISGVVGLLKTLYPTWSPAAIKSAIMTTAKTRDNTNMHSILLDSTKVGKGTPFDYGAGHVHPNNAMDPGLVYDTTIDDYLNFLCARGYNSLALKKFSNNQFVCAEAFAITDLNYPSISVPKLQIGAPFTINRRVKNVGISAGTYVARVKMPKGVAVTVEPSTLQFNSVGEEKAFKLVFQCNSKLQRQGYVFGTLVWSDGKHFVRSPIAVKLG 755
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 20279255 20285145 - Tan0009395.1 Tan01g1887 739311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g1887 755 ProSitePatterns Serine proteases, subtilase family, serine active site. 537 547 IPR023828 -
Tan01g1887 755 CDD PA_subtilisin_like 337 468 - -
Tan01g1887 755 Gene3D Peptidase S8/S53 domain 126 622 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Tan01g1887 755 ProSiteProfiles Serine proteases, subtilase domain profile. 100 609 - -
Tan01g1887 755 Pfam Fibronectin type-III domain 654 752 IPR041469 -
Tan01g1887 755 Pfam PA domain 363 454 IPR003137 -
Tan01g1887 755 Pfam Peptidase inhibitor I9 11 96 IPR010259 -
Tan01g1887 755 Gene3D - 331 475 - -
Tan01g1887 755 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 4 96 IPR037045 -
Tan01g1887 755 FunFam Subtilisin-like protease SBT5.3 2 96 - -
Tan01g1887 755 Coils Coil 365 385 - -
Tan01g1887 755 FunFam Subtilisin-like protease SBT1.5 126 345 - -
Tan01g1887 755 Pfam Subtilase family 194 587 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Tan01g1887 755 PRINTS Subtilisin serine protease family (S8) signature 197 210 IPR015500 -
Tan01g1887 755 PRINTS Subtilisin serine protease family (S8) signature 124 143 IPR015500 -
Tan01g1887 755 PRINTS Subtilisin serine protease family (S8) signature 536 552 IPR015500 -
Tan01g1887 755 SUPERFAMILY Subtilisin-like 95 613 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Tan01g1887 755 FunFam subtilisin-like protease SBT1.5 331 475 - -
Tan01g1887 755 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 12 750 IPR045051 -
Tan01g1887 755 CDD Peptidases_S8_3 94 572 IPR034197 -
Tan01g1887 755 Gene3D - 626 754 - -
Tan01g1887 755 SUPERFAMILY Protease propeptides/inhibitors 37 93 - -
Tan01g1887 755 FunFam Subtilisin-like protease SBT1.5 626 755 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g1883 Tan-Chr1:20233741 Tan01g1887 Tan-Chr1:20279255 4.60E-300 dispersed
Tan01g1884 Tan-Chr1:20247615 Tan01g1887 Tan-Chr1:20279255 2.10E-297 dispersed
Tan01g1885 Tan-Chr1:20255664 Tan01g1887 Tan-Chr1:20279255 1.00E-261 dispersed
Tan01g1887 Tan-Chr1:20279255 Tan09g0366 Tan-Chr9:34350106 1.00E-251 dispersed
Tan01g1886 Tan-Chr1:20267044 Tan01g1887 Tan-Chr1:20279255 8.00E-275 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g1887 - - - 0.0