Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan01g1901 | ATGGGGAGGACTGATGATAATGTTGCTATAATTGGGGATTGGGTGCCTCCAAGTCCCAGCCCAAGAACCTTCTTCTCAGCAATGCTAGGGGAGGATGTTGGTTCGAGACCCGCCATGGATGCTACTACCATCAGTGATAAAACTGAAGAGCTCTTTCTCAGGCCTCGAGAACATACGGTATCGGAAAACACTGTTGTTGCAAGAGGCGGGATCCCAGGTATCAATTCTGGTGACCAGTCGATGGATATAGGTTCGTTCTCAGAGCAGAAATTCCGTGGAGGTCTTGTGGAAAGGATTGCAGCCAGAGCTGGATTTAATGCTCCAAGATTGAATACAGAGAGCATTAGATCCACAGATCATTCTTTGAATTCAGATGTCAAGTCTCCTTACTTGACAATACCGCCTGGTCTCAGTCCAACTACGTTGCTAGATTCTCCAGTTTTTCTTTCCAATTCACTGGCCCAGCAATCTCCCACAACTGGAAAGTTCCCTTTTTTGCCAAATGTTAGTAACCTGAGCTCGACAATGATGTCGGAGGCCAACAATAAAGGCAGCGACAATCCATTCAACGATAACAGTACATCATTTGCATTCAGACCCGGTGTGGAATCAGGATCGTCCTTTTTTCTCGGTGCAGCAAGCAAAACAGCTTCTGCCACTATTCTTCCACAATCTTGTCCAAGAATTGAGGTTCCAGTTCCACGTTCAGAAACTTCTTTTCAATCTCATCTTGTAGAACCATCTCTGTCTTTACCCCAAAATAGAATCAGTCATCATCCTCAAGTGGGACTCTCTACATCATGCGTGGAGAGGGATGATGGGGGTAAGACCGTGTCAGACGATCAAAGACCCTTTGATTCTCTGTGTGGTGGTGGTGAACATTCTTCCCCGCTCGACGAGCAACCTGATGAAGGGGAGCAAAGAGGCAGTGGGGATTCTATGGCTGGTGGTGGTTGCAGTGCTCCCTCGGAGGATGGATTTAATTGGAGAAAATACGGACAAAAACACGTTAAAGGAAGCGAGTATCCTCGGAGTTATTACAAGTGCACACATCCAAACTGTCAGGTCAAGAAGAAAGTTGAGCGATCTCATGAGGGCCATATAACAGAGATCATGTATAAAGGATCACATGATCACCCAAAGCCCTCGCCCAACCGACGAGCAGCAGTCGGACCTTCAGACTCCCACATCAATATGCAACTAGACATCCCTGCACAAGCAGGGCAACAGAGTGCTGAAGGTCCCCTTTGGGAAGATTCACAAAAGGGAATTCCAACTGGAGCTCCTGATTGGATGCATGAGAACCTTGAGGTGACTTCTTCAGCATCCTTGGGTCCTGAATATGGCAATCAGCCTAACCCTTTACAGGCTCAAAATGGCAGTCATATTGAAACAGTTGAAGCCATTGATGCCTCATCAACATTCTCTAATGATGAAGATGAAGATGATAGGGGAACACATGGCAGTATAACATTGGGGTATGAGGGGGAAGGAGATGAATCTGAGTCTAAGAAAAGGAAACTCGATGCTTATGTAACAGAAATGAGCGGAGCAACTAGAGCTATCCGTGAGCCTAGAGTTGTTGTCCAGACTACCAGTGAAGTGGATATTCTGGATGATGGCTATCGTTGGCGCAAATACGGACAGAAGGTTGTGAAAGGAAATCCAAATCCTAGGAGTTACTACAAGTGCACAAACCCTGGCTGCACAGTGAGGAAGCATGTCGAGCGGGCGTCACATGACCTGAAGTCCGTGATCACGACTTACGAAGGAAAGCACAATCATGATGTTCCTGCTGCTCGCAACAGCAGCCACATCAGTTCTGGTACATCCAGTCCAGTAACCGCTCAAAACCCGACCGCAGCGATTCAAACTCATGTTCACAGGCCAGGGCCACCCCAGCCTCAAAACAGCATTCCAAGATTTGAAAGGCCAGCCTTTGGCCTTGCTGGAAGACAGCAGATGGGCAGTGCCCATGGCTTCTCTTTTGGAATGAACCAGCCTGGACTGGGAAATCTGACAATGGCAGCGGTTGGCCAAGCCAAGCTTCCTGTCCTGCCAATGCATCCATACTTAGCACAAGCACACCATGTTAATGAAATGGGTTTCTTGTTGCCTAAAGGAGAGCCCAATGTAGAACCTACATCTGATCTTGGCTTGAACTTTTCCAATGGTTCAACCGTGTATCAGCAAATTATGAGTAGGCTTCCACTTGGACCTGAGATGTGA | 2229 | 47.33 | MGRTDDNVAIIGDWVPPSPSPRTFFSAMLGEDVGSRPAMDATTISDKTEELFLRPREHTVSENTVVARGGIPGINSGDQSMDIGSFSEQKFRGGLVERIAARAGFNAPRLNTESIRSTDHSLNSDVKSPYLTIPPGLSPTTLLDSPVFLSNSLAQQSPTTGKFPFLPNVSNLSSTMMSEANNKGSDNPFNDNSTSFAFRPGVESGSSFFLGAASKTASATILPQSCPRIEVPVPRSETSFQSHLVEPSLSLPQNRISHHPQVGLSTSCVERDDGGKTVSDDQRPFDSLCGGGEHSSPLDEQPDEGEQRGSGDSMAGGGCSAPSEDGFNWRKYGQKHVKGSEYPRSYYKCTHPNCQVKKKVERSHEGHITEIMYKGSHDHPKPSPNRRAAVGPSDSHINMQLDIPAQAGQQSAEGPLWEDSQKGIPTGAPDWMHENLEVTSSASLGPEYGNQPNPLQAQNGSHIETVEAIDASSTFSNDEDEDDRGTHGSITLGYEGEGDESESKKRKLDAYVTEMSGATRAIREPRVVVQTTSEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTNPGCTVRKHVERASHDLKSVITTYEGKHNHDVPAARNSSHISSGTSSPVTAQNPTAAIQTHVHRPGPPQPQNSIPRFERPAFGLAGRQQMGSAHGFSFGMNQPGLGNLTMAAVGQAKLPVLPMHPYLAQAHHVNEMGFLLPKGEPNVEPTSDLGLNFSNGSTVYQQIMSRLPLGPEM | 742 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 20368834 | 20373153 | + | Tan0012232.3 | Tan01g1901 | 739325 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan01g1901 | 742 | MobiDBLite | consensus disorder prediction | 473 | 506 | - | - | |
Tan01g1901 | 742 | Gene3D | WRKY domain | 525 | 591 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Tan01g1901 | 742 | ProSiteProfiles | WRKY domain profile. | 324 | 382 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Tan01g1901 | 742 | FunFam | WRKY transcription factor 33 | 525 | 591 | - | - | |
Tan01g1901 | 742 | SMART | WRKY_cls | 323 | 381 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Tan01g1901 | 742 | SMART | WRKY_cls | 538 | 597 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Tan01g1901 | 742 | SUPERFAMILY | WRKY DNA-binding domain | 530 | 598 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Tan01g1901 | 742 | MobiDBLite | consensus disorder prediction | 600 | 616 | - | - | |
Tan01g1901 | 742 | SUPERFAMILY | WRKY DNA-binding domain | 322 | 382 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Tan01g1901 | 742 | Gene3D | WRKY domain | 318 | 383 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Tan01g1901 | 742 | Pfam | WRKY DNA -binding domain | 324 | 380 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Tan01g1901 | 742 | Pfam | WRKY DNA -binding domain | 539 | 596 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Tan01g1901 | 742 | ProSiteProfiles | WRKY domain profile. | 533 | 598 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Tan01g1901 | 742 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 185 | 617 | IPR044810 | GO:0003700(InterPro) | |
Tan01g1901 | 742 | MobiDBLite | consensus disorder prediction | 594 | 616 | - | - | |
Tan01g1901 | 742 | MobiDBLite | consensus disorder prediction | 251 | 329 | - | - | |
Tan01g1901 | 742 | FunFam | WRKY transcription factor | 313 | 383 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan01g1899 | Tan-Chr1:20368380 | Tan01g1901 | Tan-Chr1:20368834 | 0.00E+00 | dispersed | |
Tan01g1901 | Tan-Chr1:20368834 | Tan09g0604 | Tan-Chr9:52184701 | 9.30E-93 | dispersed | |
Tan01g1900 | Tan-Chr1:20368380 | Tan01g1901 | Tan-Chr1:20368834 | 0.00E+00 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
26395 | PF03106 | WRKY | 3.00E-24 | CL0274 | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan01g1901 | K18835 | - | csv:101207853 | 1309.28 |