Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g1934 ATGTCTGGAAGAGGTTGGAGAAATCCCAAATGTAATGGAAAACTTCCACCAGGTTCAATGGGCTTTCCTCTACTTGGTGAAACCCTGCAGTTCTTTGCTCCCTATACCTCCTCTGATGTTCCTCCTTTCATCAGAAAGAGAATGGATAGGTACGGACCGATATTCAGAACAAGTTTGGTGGGAAGACCACTGATTGTCTCAACAGACCCCGACTTGAATTACTTTATCTTTCAACAAGAGGGACAATTGTTCCAGAGCTGGTATCCAGATACCTTCACAGAGATATTTGGAAGACAAAATGTTGGTTCGTTGCACGGTTTCATGTATAAATATCTAAAGAACATGGTTCTTCATCTTTTTGGCCCTGAAAGTCTGAGAAAGATGATACCTGAAGTTGAGGCTGTAGCAACCAGAAGATTGAGACAATGGTCATCGCATGACTCAGTTGAAGTGAAGGATAAGACTGCAAGTATGATTTTTGATCTGACTGCAAAGAAGCTGATTAGTTATGATTCAGAAAATTCTTCGGAGAATTTGAGGGAAAACTTTGTTGCATTCATACAGGGCTTGATCTCCTTCCCTCTAAATGTTCCAGGAACTGCTTATAGCAAATGCTTACAGGGCAGGAAAAAGGCGATGACGATGCTGAAAAACATGTTACAAGAAAGGCGGGCAAATCCAAGGAAACAACAAATAGATTTTTTTGATTTTGTTCTCGAAGAACTGGCGAAAGATGGAACTCTTCTCACTGAAGCAATTGCTTTGGACCTTATGTTTGTACTACTTTTTGCAAGCTTCGAAACTACTTCACTTGCTATCACTGCAGCCATTAAATTTCTCCTCAACAATCCTCATGTGCTGGAGGAGCTGACGGCTGAACATGAGGGAATATTGAAGGCAAGGGAGAATCCAGATTCTGGGCTTACATGGGGAGAATACAAATCCATGACATTCACATTTCAGTTCATCAATGAAACTGTGAGACTGGCAAATATAGTTCCAGGAATCTTTCGAAAATCACTGAGAGATGTACAGTTTAAGGGATATACCATTCCAGCAGGGTGGGCTATTATGGTCTGCCCTCCGGCCGTGCACTTAAATCCAGAAAAGTACGTCGATCCCCTCGCTTTTAATCCGTGGCGGTGGGAGAAATCTGAACTGAATGGAGCCTCTAAACATTTCATGGCTTTTGGTGGAGGCATGAGGTTCTGTGTTGGTACAGATTTTACCAAAGTTCAAATGGCTGTGTTTCTCCATTGCCTGGTTACAAAGTACAGGTTCAAAGCAATCAAGGGAGGCAATATCGTGCGAACTCCCGGTTTACAGTTTCCCGACGGCTTTCACGTTCAAATCATGGAGAAATAG 1365 42.42 MSGRGWRNPKCNGKLPPGSMGFPLLGETLQFFAPYTSSDVPPFIRKRMDRYGPIFRTSLVGRPLIVSTDPDLNYFIFQQEGQLFQSWYPDTFTEIFGRQNVGSLHGFMYKYLKNMVLHLFGPESLRKMIPEVEAVATRRLRQWSSHDSVEVKDKTASMIFDLTAKKLISYDSENSSENLRENFVAFIQGLISFPLNVPGTAYSKCLQGRKKAMTMLKNMLQERRANPRKQQIDFFDFVLEELAKDGTLLTEAIALDLMFVLLFASFETTSLAITAAIKFLLNNPHVLEELTAEHEGILKARENPDSGLTWGEYKSMTFTFQFINETVRLANIVPGIFRKSLRDVQFKGYTIPAGWAIMVCPPAVHLNPEKYVDPLAFNPWRWEKSELNGASKHFMAFGGGMRFCVGTDFTKVQMAVFLHCLVTKYRFKAIKGGNIVRTPGLQFPDGFHVQIMEK 454
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
1 21123931 21128857 + Tan0004640.1 Tan01g1934 739358
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tan01g1934 454 SUPERFAMILY Cytochrome P450 12 450 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g1934 454 Pfam Cytochrome P450 16 437 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g1934 454 FunFam Cytochrome P450 family protein 7 453 - -
Tan01g1934 454 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 397 406 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Tan01g1934 454 PANTHER CYTOCHROME P450 26 14 425 - GO:0004497(PANTHER)|GO:0007275(PANTHER)|GO:0010268(PANTHER)|GO:0016125(PANTHER)|GO:0016132(PANTHER)|GO:0016491(PANTHER)
Tan01g1934 454 PRINTS P450 superfamily signature 321 332 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g1934 454 PRINTS P450 superfamily signature 264 281 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g1934 454 PRINTS P450 superfamily signature 404 415 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g1934 454 PRINTS P450 superfamily signature 395 404 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g1934 454 Gene3D Cytochrome P450 7 453 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g1934 454 PRINTS E-class P450 group I signature 273 299 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g1934 454 PRINTS E-class P450 group I signature 394 404 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g1934 454 PRINTS E-class P450 group I signature 360 384 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g1934 454 PRINTS E-class P450 group I signature 320 338 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g1934 454 PRINTS E-class P450 group I signature 48 67 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g1934 454 PRINTS E-class P450 group I signature 253 270 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g1934 454 PRINTS E-class P450 group I signature 404 427 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g1934 454 CDD CYP90-like 47 451 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g1934 Tan-Chr1:21123931 Tan01g1936 Tan-Chr1:21123931 6.20E-257 dispersed
Tan01g1934 Tan-Chr1:21123931 Tan01g1935 Tan-Chr1:21123931 8.10E-249 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g1934 - - - 0.0