Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan01g1935 | ATGGAGTTCGAGTTTGTGGCTCAATGGCTTTCTGGGACGGAGCTCCATGTCTGGAAGAGGTTCTTTGCTCCCTATACCTCCTCTGATGTTCCTCCTTTCATCAGAAAGAGAATGGATAGGTACGGACCGATATTCAGAACAAGTTTGGTGGGAAGACCACTGATTGTCTCAACAGACCCCGACTTGAATTACTTTATCTTTCAACAAGAGGGACAATTGTTCCAGAGCTGGTATCCAGATACCTTCACAGAGATATTTGGAAGACAAAATGTTGGTTCGTTGCACGGTTTCATGTATAAATATCTAAAGAACATGGTTCTTCATCTTTTTGGCCCTGAAAGTCTGAGAAAGATGATACCTGAAGTTGAGGCTGTAGCAACCAGAAGATTGAGACAATGGTCATCGCATGACTCAGTTGAAGTGAAGGATAAGACTGCAAGTATGATTTTTGATCTGACTGCAAAGAAGCTGATTAGTTATGATTCAGAAAATTCTTCGGAGAATTTGAGGGAAAACTTTGTTGCATTCATACAGGGCTTGATCTCCTTCCCTCTAAATGTTCCAGGAACTGCTTATAGCAAATGCTTACAGGGCAGGAAAAAGGCGATGACGATGCTGAAAAACATGTTACAAGAAAGGCGGGCAAATCCAAGGAAACAACAAATAGATTTTTTTGATTTTGTTCTCGAAGAACTGGCGAAAGATGGAACTCTTCTCACTGAAGCAATTGCTTTGGACCTTATGTTTGTACTACTTTTTGCAAGCTTCGAAACTACTTCACTTGCTATCACTGCAGCCATTAAATTTCTCCTCAACAATCCTCATGTGCTGGAGGAGCTGACGGCTGAACATGAGGGAATATTGAAGGCAAGGGAGAATCCAGATTCTGGGCTTACATGGGGAGAATACAAATCCATGACATTCACATTTCAGTTCATCAATGAAACTGTGAGACTGGCAAATATAGTTCCAGGAATCTTTCGAAAATCACTGAGAGATGTACAGTTTAAGGGATATACCATTCCAGCAGGGTGGGCTATTATGGTCTGCCCTCCGGCCGTGCACTTAAATCCAGAAAAGTACGTCGATCCCCTCGCTTTTAATCCGTGGCGGTGGGAGAAATCTGAACTGAATGGAGCCTCTAAACATTTCATGGCTTTTGGTGGAGGCATGAGGTTCTGTGTTGGTACAGATTTTACCAAAGTTCAAATGGCTGTGTTTCTCCATTGCCTGGTTACAAAGTACAGGTTCAAAGCAATCAAGGGAGGCAATATCGTGCGAACTCCCGGTTTACAGTTTCCCGACGGCTTTCACGTTCAAATCATGGAGAAATAG | 1335 | 42.7 | MEFEFVAQWLSGTELHVWKRFFAPYTSSDVPPFIRKRMDRYGPIFRTSLVGRPLIVSTDPDLNYFIFQQEGQLFQSWYPDTFTEIFGRQNVGSLHGFMYKYLKNMVLHLFGPESLRKMIPEVEAVATRRLRQWSSHDSVEVKDKTASMIFDLTAKKLISYDSENSSENLRENFVAFIQGLISFPLNVPGTAYSKCLQGRKKAMTMLKNMLQERRANPRKQQIDFFDFVLEELAKDGTLLTEAIALDLMFVLLFASFETTSLAITAAIKFLLNNPHVLEELTAEHEGILKARENPDSGLTWGEYKSMTFTFQFINETVRLANIVPGIFRKSLRDVQFKGYTIPAGWAIMVCPPAVHLNPEKYVDPLAFNPWRWEKSELNGASKHFMAFGGGMRFCVGTDFTKVQMAVFLHCLVTKYRFKAIKGGNIVRTPGLQFPDGFHVQIMEK | 444 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 21123931 | 21128857 | + | Tan0004640.2 | Tan01g1935 | 739359 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan01g1935 | 444 | CDD | CYP90-like | 37 | 441 | - | - | |
| Tan01g1935 | 444 | SUPERFAMILY | Cytochrome P450 | 25 | 440 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g1935 | 444 | PRINTS | E-class P450 group IV signature | 306 | 322 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g1935 | 444 | PRINTS | E-class P450 group IV signature | 378 | 394 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g1935 | 444 | PRINTS | E-class P450 group IV signature | 394 | 412 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g1935 | 444 | PRINTS | E-class P450 group IV signature | 32 | 55 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g1935 | 444 | PRINTS | E-class P450 group IV signature | 355 | 373 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g1935 | 444 | PRINTS | E-class P450 group IV signature | 339 | 353 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g1935 | 444 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 387 | 396 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Tan01g1935 | 444 | Pfam | Cytochrome P450 | 34 | 427 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g1935 | 444 | PANTHER | CYTOCHROME P450 26 | 28 | 415 | - | GO:0004497(PANTHER)|GO:0007275(PANTHER)|GO:0010268(PANTHER)|GO:0016125(PANTHER)|GO:0016132(PANTHER)|GO:0016491(PANTHER) | |
| Tan01g1935 | 444 | Gene3D | Cytochrome P450 | 13 | 443 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g1935 | 444 | PRINTS | P450 superfamily signature | 254 | 271 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g1935 | 444 | PRINTS | P450 superfamily signature | 394 | 405 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g1935 | 444 | PRINTS | P450 superfamily signature | 385 | 394 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g1935 | 444 | PRINTS | P450 superfamily signature | 311 | 322 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g1935 | 444 | FunFam | Cytochrome P450 family protein | 17 | 443 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan01g1935 | Tan-Chr1:21123931 | Tan06g1424 | Tan-Chr6:18742710 | 2.50E-109 | dispersed | |
| Tan01g1934 | Tan-Chr1:21123931 | Tan01g1935 | Tan-Chr1:21123931 | 8.10E-249 | tandem | |
| Tan01g1935 | Tan-Chr1:21123931 | Tan01g1936 | Tan-Chr1:21123931 | 1.00E-248 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan01g1935 | - | - | - | 0.0 |