Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g1935 ATGGAGTTCGAGTTTGTGGCTCAATGGCTTTCTGGGACGGAGCTCCATGTCTGGAAGAGGTTCTTTGCTCCCTATACCTCCTCTGATGTTCCTCCTTTCATCAGAAAGAGAATGGATAGGTACGGACCGATATTCAGAACAAGTTTGGTGGGAAGACCACTGATTGTCTCAACAGACCCCGACTTGAATTACTTTATCTTTCAACAAGAGGGACAATTGTTCCAGAGCTGGTATCCAGATACCTTCACAGAGATATTTGGAAGACAAAATGTTGGTTCGTTGCACGGTTTCATGTATAAATATCTAAAGAACATGGTTCTTCATCTTTTTGGCCCTGAAAGTCTGAGAAAGATGATACCTGAAGTTGAGGCTGTAGCAACCAGAAGATTGAGACAATGGTCATCGCATGACTCAGTTGAAGTGAAGGATAAGACTGCAAGTATGATTTTTGATCTGACTGCAAAGAAGCTGATTAGTTATGATTCAGAAAATTCTTCGGAGAATTTGAGGGAAAACTTTGTTGCATTCATACAGGGCTTGATCTCCTTCCCTCTAAATGTTCCAGGAACTGCTTATAGCAAATGCTTACAGGGCAGGAAAAAGGCGATGACGATGCTGAAAAACATGTTACAAGAAAGGCGGGCAAATCCAAGGAAACAACAAATAGATTTTTTTGATTTTGTTCTCGAAGAACTGGCGAAAGATGGAACTCTTCTCACTGAAGCAATTGCTTTGGACCTTATGTTTGTACTACTTTTTGCAAGCTTCGAAACTACTTCACTTGCTATCACTGCAGCCATTAAATTTCTCCTCAACAATCCTCATGTGCTGGAGGAGCTGACGGCTGAACATGAGGGAATATTGAAGGCAAGGGAGAATCCAGATTCTGGGCTTACATGGGGAGAATACAAATCCATGACATTCACATTTCAGTTCATCAATGAAACTGTGAGACTGGCAAATATAGTTCCAGGAATCTTTCGAAAATCACTGAGAGATGTACAGTTTAAGGGATATACCATTCCAGCAGGGTGGGCTATTATGGTCTGCCCTCCGGCCGTGCACTTAAATCCAGAAAAGTACGTCGATCCCCTCGCTTTTAATCCGTGGCGGTGGGAGAAATCTGAACTGAATGGAGCCTCTAAACATTTCATGGCTTTTGGTGGAGGCATGAGGTTCTGTGTTGGTACAGATTTTACCAAAGTTCAAATGGCTGTGTTTCTCCATTGCCTGGTTACAAAGTACAGGTTCAAAGCAATCAAGGGAGGCAATATCGTGCGAACTCCCGGTTTACAGTTTCCCGACGGCTTTCACGTTCAAATCATGGAGAAATAG 1335 42.7 MEFEFVAQWLSGTELHVWKRFFAPYTSSDVPPFIRKRMDRYGPIFRTSLVGRPLIVSTDPDLNYFIFQQEGQLFQSWYPDTFTEIFGRQNVGSLHGFMYKYLKNMVLHLFGPESLRKMIPEVEAVATRRLRQWSSHDSVEVKDKTASMIFDLTAKKLISYDSENSSENLRENFVAFIQGLISFPLNVPGTAYSKCLQGRKKAMTMLKNMLQERRANPRKQQIDFFDFVLEELAKDGTLLTEAIALDLMFVLLFASFETTSLAITAAIKFLLNNPHVLEELTAEHEGILKARENPDSGLTWGEYKSMTFTFQFINETVRLANIVPGIFRKSLRDVQFKGYTIPAGWAIMVCPPAVHLNPEKYVDPLAFNPWRWEKSELNGASKHFMAFGGGMRFCVGTDFTKVQMAVFLHCLVTKYRFKAIKGGNIVRTPGLQFPDGFHVQIMEK 444
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
1 21123931 21128857 + Tan0004640.2 Tan01g1935 739359
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tan01g1935 444 CDD CYP90-like 37 441 - -
Tan01g1935 444 SUPERFAMILY Cytochrome P450 25 440 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g1935 444 PRINTS E-class P450 group IV signature 306 322 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g1935 444 PRINTS E-class P450 group IV signature 378 394 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g1935 444 PRINTS E-class P450 group IV signature 394 412 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g1935 444 PRINTS E-class P450 group IV signature 32 55 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g1935 444 PRINTS E-class P450 group IV signature 355 373 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g1935 444 PRINTS E-class P450 group IV signature 339 353 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g1935 444 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 387 396 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Tan01g1935 444 Pfam Cytochrome P450 34 427 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g1935 444 PANTHER CYTOCHROME P450 26 28 415 - GO:0004497(PANTHER)|GO:0007275(PANTHER)|GO:0010268(PANTHER)|GO:0016125(PANTHER)|GO:0016132(PANTHER)|GO:0016491(PANTHER)
Tan01g1935 444 Gene3D Cytochrome P450 13 443 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g1935 444 PRINTS P450 superfamily signature 254 271 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g1935 444 PRINTS P450 superfamily signature 394 405 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g1935 444 PRINTS P450 superfamily signature 385 394 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g1935 444 PRINTS P450 superfamily signature 311 322 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g1935 444 FunFam Cytochrome P450 family protein 17 443 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g1935 Tan-Chr1:21123931 Tan06g1424 Tan-Chr6:18742710 2.50E-109 dispersed
Tan01g1934 Tan-Chr1:21123931 Tan01g1935 Tan-Chr1:21123931 8.10E-249 tandem
Tan01g1935 Tan-Chr1:21123931 Tan01g1936 Tan-Chr1:21123931 1.00E-248 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g1935 - - - 0.0