Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g2024 ATGAGGGGTATTTCCTTTCACTTTCAGGGGAAGGGGGAGTTGGAAATTTCAGCCGCTTTTTCTGCTTCTTCTCCGATTTGCTCTGGTTTTGCAGAAAAGTGGGTTAAAAAAGGAGAACAAGAACAGGAAGCAGAAGAAGAACAAGAAGAAGGGCTTTCTTATTTTGTTTTACCCAACAACGAACCCACTTCCGTCCTTCATATGAGAAGCCCCAGTCCTCCCACATCGGCTTCTACTCTCTCTTCTTCCTTTGGGGGCGGCGGTGGCGGTGGCGGTGGCTGTGTTCCTTCACTTCCGCCGGAGACTCCTGCTGTTGAGCCGCTTGCCGGAGCTGGGGTTGGGACTGCCATTTTTCCCGGTGGATTGGAGCGATGTGGGGTTGGATTGGAAGATTTGGAGAGTATGTGGTCGGAATCGGCTGGACCAGAACAGTCGTTTCTCCGGTGGATCGCCGGAGATGTTGTTGAAGATCCCGGTCTGGGGATTAAAAGTCTTTTGCAAAATGGGAATATACCCTTTGATTTGGATGGCAATGCCGGTATCGGAATCGTCGAGCAGGGTTCCGAATTCGACCCCGGTGCTGCTGGTAATGTTCTTGCCAATATCAATCCTAATTTATCGTTTCCTCTTCCTCCTGCTTGTACTGGGTTTTCTGATGTTAATGGTAGTAATAAGGCTTTTAGTAGAAGCACTTGTGGGGTTGCTAATTACAAGAGTTCTAGTTTGGGGTTAAACAATCGCCATGGAAATTTCAATGTTCAGAACCCTATCTTTACTGGTTCTGTTGAGAATCTTGTTGTTCCTGTTTCTGGTATGATTTATCCTCAGCAACTTCAGCCATTTGAGAGCCCTGATGAGAAGCCTCAGAATTTGAATGCTCAGGTTTTGTTGAACCAGCATCAGCAGCCTCAGAATCCTAGCTTTTTTGTGCCATTGACATTTGGTCAACAGGAACACCAGCTTCAGCCTCAACTGAAGAGGCACAATTCAAGTGGAGGCATCGACCCGAACGGGCAGATCCCGAAAGTTCCATTTATGGATCCAGGGAATGAAATTTTTCTGAGGAATCATCAGTTGCAGGTGCAGCAGCAGCTTGGTTATCCGCCGGGTTTGCAGTTTCTTCCTCAGCAGAAGGCAATGTCGCCGAAGCCAAAAGTTGTAGGGCTCGGCGACGAAATGGCGTATCACAATCCCCCACAGCAACAGCATCAGCATCAGCAACATGCTTTGCTCGACCAGCTCTACAAGGCAGCAGAGCTGGTAGGGACTGGGAATTTCTCACACGCGCAAGGGATATTGGCGCGGCTCAATCACCAGCTCTCACCGGTTGGAAAGCCCCTTCAAAGGGCTACTTTCTACTTCAAGGAGGCTCTTCAATTGCTCCTCCTTATGAACAACCCAGTTAATCCTCCTCCACCTCGCTGCCCGACACCATGTGATGTGATCTTCAAGATGGGTGCTTACAAGGTGTTTTCGGAGATCTCCCCACTCATTCAGTTTGTGAATTTCACCTGCAACCAGGCACTACTTGAGGCCCTCGATGATGTTGATCGAATTCACATTGTTGATTTCGATATTGGTTTTGGAGCTCAGTGGGCTTCTTTTATGCAGGAACTGTCCTTGAGGAACAGGGGTGCTCCATCGCTAAAAATCACTGCTTTTGCCTCTCCCTCCACTCACCATCCGATTGAACTCGGGCTTATGCGCGATAATCTCACTCAATTTGCTAATGACATTGGAATAAGTTTTGAGTTCGAAGTGGTTAACTTTGATTCTTTGAACCAGAACTCCTTTTCCTTGCCATTTTCTCGAGCGAGCGAAAATGAGGCTATTGCAGTAAACTTCCCTCTATGGTCCTCATCTAATGAACCAGCAATGCTTCCGTCTCTCCTCCGTTTCATCAAGCAACTCTCACCGAAAATTGTGGTTTCACTTGACCGAGGGTGTGAGCGAAGTGACCTCCCATTTCCTCAGCATGTGCTTCAGGCACTTCAATCATACATTAACCTCCTGGAATCTCTGGATGCTATTAATATGAATTCGGATGCTGTCAACAAGATCGAGAGGTTTCTTTTGCAACCAAGAATTGAAACCACCATTCTGGGGCGGTTTCGAGCACCTGAAAGAATGCCCCTATGGAAGACACTCTTTGCCTCAGCCGGGTACATGCCAGTAACATTCAGCAACTTCACTGAAACTCAAGCAGAATGTGTAGCAAAGAGAACTTCTGTGAGGGGATTTCACGTCGAAAAACGTCAGGCTTCTCTAGTTTTATGCTGGCAGCGCCGGGAACTCATATCTGCTTCAGCTTGGAGGTGTTGA 2322 47.67 MRGISFHFQGKGELEISAAFSASSPICSGFAEKWVKKGEQEQEAEEEQEEGLSYFVLPNNEPTSVLHMRSPSPPTSASTLSSSFGGGGGGGGGCVPSLPPETPAVEPLAGAGVGTAIFPGGLERCGVGLEDLESMWSESAGPEQSFLRWIAGDVVEDPGLGIKSLLQNGNIPFDLDGNAGIGIVEQGSEFDPGAAGNVLANINPNLSFPLPPACTGFSDVNGSNKAFSRSTCGVANYKSSSLGLNNRHGNFNVQNPIFTGSVENLVVPVSGMIYPQQLQPFESPDEKPQNLNAQVLLNQHQQPQNPSFFVPLTFGQQEHQLQPQLKRHNSSGGIDPNGQIPKVPFMDPGNEIFLRNHQLQVQQQLGYPPGLQFLPQQKAMSPKPKVVGLGDEMAYHNPPQQQHQHQQHALLDQLYKAAELVGTGNFSHAQGILARLNHQLSPVGKPLQRATFYFKEALQLLLLMNNPVNPPPPRCPTPCDVIFKMGAYKVFSEISPLIQFVNFTCNQALLEALDDVDRIHIVDFDIGFGAQWASFMQELSLRNRGAPSLKITAFASPSTHHPIELGLMRDNLTQFANDIGISFEFEVVNFDSLNQNSFSLPFSRASENEAIAVNFPLWSSSNEPAMLPSLLRFIKQLSPKIVVSLDRGCERSDLPFPQHVLQALQSYINLLESLDAINMNSDAVNKIERFLLQPRIETTILGRFRAPERMPLWKTLFASAGYMPVTFSNFTETQAECVAKRTSVRGFHVEKRQASLVLCWQRRELISASAWRC 773
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 23091558 23094882 + Tan0007525.1 Tan01g2024 739448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g2024 773 ProSiteProfiles GRAS family profile. 401 772 IPR005202 -
Tan01g2024 773 MobiDBLite consensus disorder prediction 66 101 - -
Tan01g2024 773 MobiDBLite consensus disorder prediction 66 85 - -
Tan01g2024 773 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 400 771 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)
Tan01g2024 773 Pfam GRAS domain family 411 772 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g1287 Tan-Chr1:12667558 Tan01g2024 Tan-Chr1:23091558 1.20E-63 dispersed
Tan01g2024 Tan-Chr1:23091558 Tan11g0122 Tan-Chr11:1245175 3.10E-38 dispersed
Tan01g2024 Tan-Chr1:23091558 Tan06g1914 Tan-Chr6:56379395 4.90E-145 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
26406 PF03514 GRAS 1.60E-93 CL0063 Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g2024 K27747 - csv:101218630 1311.98