Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g2043 ATGAAGAGAGAAACAATGGAAGATTTTGCAATAATGGGTGGGTTGGTGGGAGTGCAGTTTGTATATGCAGGGAACTCTGTTTTTATGAGTTTTCTTATGTCTTTAGGCATTGATCCTTTAGCTCTTGTCATCTTCTCTACCATCTCAACTTTTCTCATTGTCTCTCCTATTGCTGTTTATTTTGAAAGGTCTAATTGGCCAAAGAAACTTAGTCTAAAGTTGATTTCTCAGCTTCTTCTCATATCCTTTGGAGGGGTTACATTGTTTCAGTCCCTTTTTATGAAAGGAATACAGCTAACTTCTCCGTCGTTAGCGACCGCGATGCCGAATCTCGCCCCGGGACTCATCTTTGCCATTGCTTGGATCTTTAGATTAGAAAAAGTTCGGCTAAGTTGCATCTATAGCAAGATCAAGATTTTAGGTACATTTCTATGTGTGATAGGCGCATTCACCATGAGCATAATGCACAGCACTTTGTCGGATGCAGCTGCAAAAGACAACATCCTACGACAACTATCGCCTCCGACCGATCAAGTGTTCGACGAACAGAAGATCATCGGTTGTATGTATCTCTTATCGGCGGTCGTCGTTTTGTCTAGCGTAGTTGTTCTGCAGGCATCGACACTAGGAGATTTCCCGGCACCGATGTCGTTGTGTGCGATAACATCCCTCATTGGAGTGCTCTTAACCATAGTTGTACATATAGTTATATATCAGAAACTGGAAATTGGTTGGTCACTTCTCAGTGTTGAAGAATTAGTTGCCTATTGTGTTCTAGGCGGAACCGTTAGCGGGGCTTGCGTGAGCTTCAATGGGTGGGCGATGAGGAGACGAGGGCCAGTTTTGGTGTCGATGTTTAGTCCGATCGGAACCGTTTGCTCACTCATTCTCTCAGTTTTCACCTTGGGAGAATCCATCAACATTGGGAGCCTTGCTGGTATGTTCCTCATGTTCACCGGCCTCTACTTCGTGCTGTGGGCGAAAGGGAAGGAAGATTATGCGAACCGAAACCGCCCCGAGAGTGAAAGTTAA 1032 44.67 MKRETMEDFAIMGGLVGVQFVYAGNSVFMSFLMSLGIDPLALVIFSTISTFLIVSPIAVYFERSNWPKKLSLKLISQLLLISFGGVTLFQSLFMKGIQLTSPSLATAMPNLAPGLIFAIAWIFRLEKVRLSCIYSKIKILGTFLCVIGAFTMSIMHSTLSDAAAKDNILRQLSPPTDQVFDEQKIIGCMYLLSAVVVLSSVVVLQASTLGDFPAPMSLCAITSLIGVLLTIVVHIVIYQKLEIGWSLLSVEELVAYCVLGGTVSGACVSFNGWAMRRRGPVLVSMFSPIGTVCSLILSVFTLGESINIGSLAGMFLMFTGLYFVLWAKGKEDYANRNRPESES 343
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 23378427 23382523 - Tan0013051.1 Tan01g2043 739467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g2043 343 PANTHER WAT1-RELATED PROTEIN 16 335 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Tan01g2043 343 SUPERFAMILY Multidrug resistance efflux transporter EmrE 249 330 - -
Tan01g2043 343 Pfam EamA-like transporter family 16 153 IPR000620 GO:0016020(InterPro)
Tan01g2043 343 Pfam EamA-like transporter family 186 325 IPR000620 GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g2043 Tan-Chr1:23378427 Tan07g1808 Tan-Chr7:69640810 3.70E-113 dispersed
Tan01g2043 Tan-Chr1:23378427 Tan08g0693 Tan-Chr8:6872296 3.20E-32 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g2043 - - - 0.0