Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g2070 ATGTATATTGAGGAATTGAAGGAAGGGGAGTTGCAGAGTGGGGAAGAGGGAGATTCAGGTTCTATTGTTGGTAATTTGGAAAGCCAGAACATTGTTAGGTCTGATGTCAAAAGGATCGTTGTTGGAGTTGGGGCTCGTGTTCTTTTCTACCCGACTTTGCTTTACAATGTTTTCAGAAATAAGCTTCAAACGGAGTTTCGTTGGTGGGACAGGGTCGACGAGTTTATATTGTTAGGTGCTGTTCCATTCCCTGCTGATGTTCCCCGTCTAAAGGAGGTTGGCGTCCGAGGAGTGATAACACTAAACGAGCCATATGAGACTTTGGTTCCTTCAACTCTATATCGTGATCATGGCATTGATCATCTGACCATTCCTACTAGAGACTATTGCTTTGCACCTTTATTGAGTGACATTTGCATTGCTGTAAATTTCATCCACAAAAATGCATCACATGGACAGACTACATATGTTCATTGTAAGGCTGGACGAGGGCGTAGCACAACCATTGTTATTTGCTATTTGGTACAATACAAGCAAATGACGCCAGATGAAGCTTATAAACATGTGAAGTCAATCAGGCCAAGGGTGCTTTTAGCATCATCACAGTGGCAGGCTGTCCTGGAATTCTACCACCGGATTGTGCTGAAAGATGTTTCCTTCTGCCACATTGATGATCTAGGAAAGAAAGTATCAGGATCATCGCATGATCTTATCGCATTTGATGATAGTTCTGTGGTTGTTGTAAAAGAATCTGATCTTGAAGGATATGACCAAAGTATCAGCCAAAGTGAAATGGGTGATATCTGGGCAGATTTAAGTGTAGTCTGCAGGGTTCGTGTTGCTGGTCAGGCAGCCCTCACAAGAATCTCCTGTTTGTGGCTCAGTTATCGAGCAAAACACCCTAACCAGAAGATTTCAGGAGATGATCTAGGTGTTGGAAAGGGCTGTTCACTCAGCGCTACGCATTTGGAAGGGTTCAGTGTGGACATCCATGTCTATTAA 1002 43.31 MYIEELKEGELQSGEEGDSGSIVGNLESQNIVRSDVKRIVVGVGARVLFYPTLLYNVFRNKLQTEFRWWDRVDEFILLGAVPFPADVPRLKEVGVRGVITLNEPYETLVPSTLYRDHGIDHLTIPTRDYCFAPLLSDICIAVNFIHKNASHGQTTYVHCKAGRGRSTTIVICYLVQYKQMTPDEAYKHVKSIRPRVLLASSQWQAVLEFYHRIVLKDVSFCHIDDLGKKVSGSSHDLIAFDDSSVVVVKESDLEGYDQSISQSEMGDIWADLSVVCRVRVAGQAALTRISCLWLSYRAKHPNQKISGDDLGVGKGCSLSATHLEGFSVDIHVY 333
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 23677787 23681766 + Tan0015408.1 Tan01g2070 739494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g2070 333 ProSitePatterns Tyrosine specific protein phosphatases active site. 157 167 IPR016130 GO:0016311(InterPro)
Tan01g2070 333 SMART dsp_5 71 212 IPR020422 GO:0006470(InterPro)
Tan01g2070 333 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 62 212 IPR029021 -
Tan01g2070 333 FunFam Dual specificity phosphatase domain protein 68 215 - -
Tan01g2070 333 MobiDBLite consensus disorder prediction 1 22 - -
Tan01g2070 333 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 136 204 IPR000387 GO:0016311(InterPro)
Tan01g2070 333 ProSiteProfiles Dual specificity protein phosphatase domain profile. 68 215 IPR020422 GO:0006470(InterPro)
Tan01g2070 333 PANTHER PHOSPHATIDYLINOSITOL PHOSPHATASE 1 288 - -
Tan01g2070 333 CDD PTPMT1 68 210 IPR044596 GO:0004721(InterPro)
Tan01g2070 333 Pfam Dual specificity phosphatase, catalytic domain 108 210 IPR000340 GO:0016311(InterPro)
Tan01g2070 333 Gene3D Protein tyrosine phosphatase superfamily 68 217 IPR029021 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g2070 Tan-Chr1:23677787 Tan08g0099 Tan-Chr8:883249 6.90E-80 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g2070 - - - 0.0