Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g2084 ATGTGCCATGATAACTTCCACGTTCATTCCTTAGAAGAGGCAACTACAGCTGAAGATAGTCTCCTAATATATTGCAAACCAGTTGAACTATACAACATCCTTCATCTTCGTTCCCTTAACAATCCTTCTTTTCTTCGACGTTGTTTGCATTACAAGCTACAAGCTAGGCAAAAAGAGAGGGTGAGCACTGGAGTGGTAATTTTCAACTATAGGGACTACAACAACATAGTACGAAAAACTGAAGTGACTGAAGACTTCTCGTGTCCATTTTGTTTGATGCTATGTGCAAGCTTTAAGGGTTTGCGCTACCACTTATGCTCTTCCCATGATATGTTCAACTTCGAATACTGGGTGACTGAAGAATATCAGGCCGTGAACGTCTCTGTGAAAATTGACGTCTTTAGACCTGAGACCGTAGCAGATGGGGTGGACCCACAACTAGAGACTTTTTTCTTCTGCACAAGAACACGAAAGCGCAAGTTAAAGAACTCTATTCAGAATGGAAAGTATGTGCAGTTCTTGGAGATGGACTCACCCAGACCTGCCACGGAAGGCATGCCCAAGGGATTTATTGGGCATAACGCTGATGGTGTATCCTGTGAAAAAGAGGGCAGCCATTCATTCCCCATTGAGACTTCTTTGCAGAATGCACAACAAGAAGGAGAAACTATTGGCCCTGAATGTCCTTCCTCTATGGAGTGCATTGAACGTGTTGCATCCAGCTCAAATATTCCAGGTGTCTCAATGGCTATCAATCAATCTTCTATAGGCCCTGAATGTTATAAAGTACCGTCTGGAAGTGATCATTTACAACCAGCCAAAGCAAGGAAGTTAACGGTAGAACGAGACCCTAGAAACCGCATGCTCTTGCAGAAACGGCAGTTTTACCACTCTCACAGGGTTCAGCCTATGGCACTGGATAAAGTACTATCCGACAAAGATAGTGAGGATGAAATAGATGATGACATTGCAGATTTTGAAGACCGAAGGATGCTTGATGATTTCGTGGATGTCACCAAAGATGAAAAGCGGCTTATGCATCTATGGAACTCCTTTGTTAGAAAGCAAAGGGTGCTAGCTGATGGTCACGTTCCTTGGGCATGTGAAGCATTCTCAAAACTTCATGGGAAAGAGCTTGTCTCATCTCCGGCTCTTTTTTGGTGTTGGAGGTTATTCATGATCAAGCTCTGGAATCATGGCCTTCTTGATGCCTCTACCATGAACAACTGTAATTTAACTCTTGAAGGATTCAAAGATGAGAGTTCGGATGCGATGAAAAACGGCATAAGAGATGACGATTAG 1302 43.16 MCHDNFHVHSLEEATTAEDSLLIYCKPVELYNILHLRSLNNPSFLRRCLHYKLQARQKERVSTGVVIFNYRDYNNIVRKTEVTEDFSCPFCLMLCASFKGLRYHLCSSHDMFNFEYWVTEEYQAVNVSVKIDVFRPETVADGVDPQLETFFFCTRTRKRKLKNSIQNGKYVQFLEMDSPRPATEGMPKGFIGHNADGVSCEKEGSHSFPIETSLQNAQQEGETIGPECPSSMECIERVASSSNIPGVSMAINQSSIGPECYKVPSGSDHLQPAKARKLTVERDPRNRMLLQKRQFYHSHRVQPMALDKVLSDKDSEDEIDDDIADFEDRRMLDDFVDVTKDEKRLMHLWNSFVRKQRVLADGHVPWACEAFSKLHGKELVSSPALFWCWRLFMIKLWNHGLLDASTMNNCNLTLEGFKDESSDAMKNGIRDDD 433
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 23879534 23898234 - Tan0013262.1 Tan01g2084 739508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g2084 433 CDD VEFS-box_EMF2-like 290 416 - -
Tan01g2084 433 PANTHER POLYCOMB GROUP PROTEIN 10 60 - GO:0005634(PANTHER)|GO:0031490(PANTHER)
Tan01g2084 433 Pfam VEFS-Box of polycomb protein 282 411 IPR019135 -
Tan01g2084 433 CDD ZnB-Zn_EMF2-like 12 134 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g0448 Tan-Chr1:4139833 Tan01g2084 Tan-Chr1:23879534 4.70E-11 dispersed
Tan01g0449 Tan-Chr1:4139833 Tan01g2084 Tan-Chr1:23879534 4.80E-11 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g2084 - - - 0.0