Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g2210 ATGGTTTCGAGGTCTTATTCTAACTTATTAGAGCTTGCTTCTGGTGGTTGTTCTCCAACTTTTGGCCTTGGCCGAGAGAAGAAGAGGCTTCCTAGAGTGGCCACTGTGGCTGGAGTCTTGTCTGAACTTGATGATGATAGCTGCAACAGTACTGGCTCGGATGCCCCTTCGTCGATCGCGCAAGACCGGATGATTATCGTAGGGAATCAGCTCCCAATTCGGGCTCATCGAGATGAGAATGGGGATTGGGGATTTAGTATGGATGAGGATTCACTTCTTTTACAGCTTAAAGATGGGCTTGGAGAAGATGTGGAAGTGATTTATATTGGTTGTCTTAGAGAAGAGATTGATCTGAGGGAGCAAGATGAGGTTGCACAAACTCTTTTGGACCGATTCAAATGCGTCCCGACGTTCCTTCCGCCAGAGCTTTTTAGTAAATTTTATCATGGATTCTGCAAGCAACATTTATGGCCATTGTTTCACTATATGCTTCCTCTGTCACCGGATCTTGGTGGCCGATTTGATCGGTCTCTTTGGCAAGCATATCTTTCGGTTAATAAGATATTTGCAGATAAAGTTATGGAAGTGATTAGCCCTGATGATGACTTTGTTTGGGTTCATGATTACCATTTGATGGTTTTGCCAACATTTTTGAGGAAGAGGTTTAACAGGGTGAAGCTTGGATTCTTCCTACACAGTCCATTTCCTTCATCCGAGATTTATCGAACTCTTCCTGTAAGAGATGAACTTCTTCGGGCACTATTGAACTCTGATCTTATTGGCTTCCACACATTTGATTATGCTAGGCACTTTCTATCTTGCTGCAGCAGAATGCTTGGTCTGTCTTATCAATCTAAGCGAGGCTACATCGGGCTCGAATACTACGGTCGTACTGTGAGCATTAAGATTCTTCCTGTCGGTATTCATATAGGTCAGCTCCAAAATGTATTAAATCTCCCCGAGACTGTATCCAAAGTTGCAGAATTGCAAAATCGGTTCAAGGGTCAAACTGTTTTGCTTGGGGTTGATGATATGGACATATTTAAAGGGATCAGCCTGAAACTTTTGGCCTTTGAACAATTGCTCCGACAACATCCCGAGAGATGGGGTAAAGCTGTGTTGGTACAAATTGCGAACCCTGCAAGAGGCAGAGGGAAAGATGTCCAGGAGGTTGTGGCTGAAACTACTGCAACGGTGAATAGAATCAATGCAACATTCAGAAGGTCTGGATATGAGCCCGTGGTTTTGATTAACACTCCCTTGCAGTTTTACGAGCGAATTGCTTACTATGCAATTGCTGAGTGCTGCCTCGTTACTGCAGTGAGAGATGGGATGAATCTTATACCTTACGAGTATATTATATGTCGACAAGGCAATGAGAAGCTTGACGATGTTCTCAGGCTAAATCCTTCAACAGCAAAGAAGAGCATGTTAGTGTTGTCTGAGTTTATTGGGTGTTCCCCATCCCTCAGCGGAGCTATTCGAGTCAACCCATGGAATATTGAAGCTGTCACCGAAGCGATGGATTCTGCCCTGGTAATCCCCGAGGCGGAAAAGCAATTGCGACATGAAAAGCATTATAGGTACGTTAGTACGCATGACGTTGCATACTGGGCACGCAGCTTTTTGCAGGATCTGGGCAGGGCCTGCAGAGACCATTCAATGAGGAGATGCTGGGGGATAGGTTTTGGTTTAGGATTTCGAGTTATCGCCCTGGATCCAAATTTCAGGAAGCTTTCAGTTGATCATATTGTTTCAGTTTATAAGAGAACCTGCCACCGGGCAATTTTGTTAGATTATGATGGTATCATGATGCTTCCTGGTTCAATTAGCATGAATCCAACTGCTGAAGTCCTTGGAATCTTGAACAACTTGTGTAAAGATCCTAAGAATGTCGTGTTCCTTGTTAGCGGAAAGGACCGAAAAACTCTGACTGAATGGTTTTCACCATGCGAAAAGCTTGGACTAGCTGCAGAACATGGCTTTTATCTTAGGCCAAATCATTCTGCAGACTGGGAGACGTGTGTAGGTGTGACCGATTTCGACTGGAAACAGATTGCAGAACCCGTTATGCAATTGTATACCGAGACAACTGACGGTTCTACAATCGAAACTAAAGAGAGTGCTCTTGTTTGGAACTACCTTTATGCGGATCCTGATTTTGGGTCTTGCCAGGCCAAGGAACTATTAGATCACCTGGAAAGTGTTCTTGCTAATGAGCCAGTTTCTGTCAAGAGTGGCCAACACATTGTAGAAGTCAAACCTCAGGGTGTAAATAAGGGCATTGTAGCAGAATATCTCTTGCAAACAATGAGGGAGAGGGGAATGCTTCCCGATTTCGTTCTATGCATCGGAGACGATAGGTCGGACGAGGATATGTTTGAGGTGATAACGAGTGCGAAAGCCACCCTTCCTCCCGGTGCCGAAGTGTTCGGTTGCACCGTCGGCCAGAAACCGAGCAAAGCCAAGTATTACTTGGAAGACACACACGAAATCTTGAGAATGTTACAAGGTCTCACCCATGCGTCCGAGCACGCTGCTAGAGTCGCTCCGCAGACGACACCTCATAGAGTGGTAATTGCAGAGAGTAAATAA 2595 44.89 MVSRSYSNLLELASGGCSPTFGLGREKKRLPRVATVAGVLSELDDDSCNSTGSDAPSSIAQDRMIIVGNQLPIRAHRDENGDWGFSMDEDSLLLQLKDGLGEDVEVIYIGCLREEIDLREQDEVAQTLLDRFKCVPTFLPPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAYLSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPVRDELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYQSKRGYIGLEYYGRTVSIKILPVGIHIGQLQNVLNLPETVSKVAELQNRFKGQTVLLGVDDMDIFKGISLKLLAFEQLLRQHPERWGKAVLVQIANPARGRGKDVQEVVAETTATVNRINATFRRSGYEPVVLINTPLQFYERIAYYAIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDDVLRLNPSTAKKSMLVLSEFIGCSPSLSGAIRVNPWNIEAVTEAMDSALVIPEAEKQLRHEKHYRYVSTHDVAYWARSFLQDLGRACRDHSMRRCWGIGFGLGFRVIALDPNFRKLSVDHIVSVYKRTCHRAILLDYDGIMMLPGSISMNPTAEVLGILNNLCKDPKNVVFLVSGKDRKTLTEWFSPCEKLGLAAEHGFYLRPNHSADWETCVGVTDFDWKQIAEPVMQLYTETTDGSTIETKESALVWNYLYADPDFGSCQAKELLDHLESVLANEPVSVKSGQHIVEVKPQGVNKGIVAEYLLQTMRERGMLPDFVLCIGDDRSDEDMFEVITSAKATLPPGAEVFGCTVGQKPSKAKYYLEDTHEILRMLQGLTHASEHAARVAPQTTPHRVVIAESK 864
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 26198772 26203157 - Tan0005454.2 Tan01g2210 739634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g2210 864 Gene3D Glycogen Phosphorylase B; 315 531 - -
Tan01g2210 864 NCBIfam HAD-IIB family hydrolase 596 797 IPR006379 -
Tan01g2210 864 FunFam Alpha,alpha-trehalose-phosphate synthase 316 531 - -
Tan01g2210 864 NCBIfam trehalose-phosphatase 593 840 IPR003337 GO:0005992(InterPro)
Tan01g2210 864 Pfam Trehalose-phosphatase 597 829 IPR003337 GO:0005992(InterPro)
Tan01g2210 864 Gene3D - 593 710 IPR023214 -
Tan01g2210 864 Gene3D - 723 853 IPR023214 -
Tan01g2210 864 SUPERFAMILY HAD-like 594 839 IPR036412 -
Tan01g2210 864 FunFam Trehalose-6-phosphate synthase 2 677 756 - -
Tan01g2210 864 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 56 314 - -
Tan01g2210 864 CDD GT20_TPS 63 546 IPR001830 GO:0003824(InterPro)|GO:0005992(InterPro)
Tan01g2210 864 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 593 710 - -
Tan01g2210 864 Pfam Glycosyltransferase family 20 63 546 IPR001830 GO:0003824(InterPro)|GO:0005992(InterPro)
Tan01g2210 864 Gene3D Glycogen Phosphorylase B; 56 314 - -
Tan01g2210 864 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 27 841 IPR001830 GO:0003824(InterPro)|GO:0004805(PANTHER)|GO:0005829(PANTHER)|GO:0005992(InterPro)|GO:0005992(PANTHER)|GO:0070413(PANTHER)
Tan01g2210 864 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 723 852 - -
Tan01g2210 864 CDD HAD_TPP 595 831 - -
Tan01g2210 864 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 63 550 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g2210 Tan-Chr1:26198772 Tan04g1479 Tan-Chr4:18882171 0.00E+00 dispersed
Tan01g2209 Tan-Chr1:26198772 Tan01g2210 Tan-Chr1:26198772 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g2210 K16055 - csv:101207192 1684.85