Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g2229 ATGTCTCTGCTCAATCATGAGCATATTATGCCTCCTTATGGCACACCCCCACATCCATATGTTGCAATGTATCCCCTGGGATCGTATCCTTTTAGCCCATTTGCAATCCCCTCTCCAAATGGCATCACTGAGGCTTCTGGTAATACAGCAGGCAGCTTAGATGGGGAGGTTAAGCCACCTGAAGTAAAGGAAAAGCTGCCAATTAAAAGATCAAAAGGAAGTTTGGGCAGTTTGAACATGATTACAGGGAAGAACAATGAGCTCGGTAAAACATCTGGAACATCTGCTAATGGAGCATACTCTAAAAGTGGTGAGAGTGCCAGCGAAGGTACAAGTGAAGGAAGCGATGCCAATTCACAAAATGAATCACAACCTAAGTTAGGTTCCAGGCAAGACAATTTGGAAGTTGAAGCATCTCAGAATGGTAACTCTATGCATGGAGCTCAAAATGGAGGATCTAATACCCAGGCAATGGCTGTCATTCCATTGGCAGCTGCTGGGGCCCCGGGAGTCGTTCCTGGTCCCACAACAAACTTAAATATTGGAATGGACTATTGGGGTGCATCATCCACTATCCCTGCAATGCGTGGAAAGGTTCCATCGACTCCGGTTGCTGGAGGATTAGTTGGATCTCGGGATAGCGCACAGTCACAACTTTGGTTGCAGGTAGTCTCTAATAGACTCGAAATGTTCGCAATGAAAGTCTGGCTATTCATTTTTAAAAAGACTCGAAAAGTCGGTCTTTGA 747 45.38 MSLLNHEHIMPPYGTPPHPYVAMYPLGSYPFSPFAIPSPNGITEASGNTAGSLDGEVKPPEVKEKLPIKRSKGSLGSLNMITGKNNELGKTSGTSANGAYSKSGESASEGTSEGSDANSQNESQPKLGSRQDNLEVEASQNGNSMHGAQNGGSNTQAMAVIPLAAAGAPGVVPGPTTNLNIGMDYWGASSTIPAMRGKVPSTPVAGGLVGSRDSAQSQLWLQVVSNRLEMFAMKVWLFIFKKTRKVGL 248
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 26558044 26562384 - Tan0009003.1 Tan01g2229 739653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g2229 248 MobiDBLite consensus disorder prediction 75 131 - -
Tan01g2229 248 Pfam Disordered region downstream of MFMR 64 191 - -
Tan01g2229 248 PANTHER G-BOX-BINDING FACTOR 3-RELATED 7 209 IPR044827 GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0006355(InterPro)|GO:0043565(PANTHER)|GO:0043565(InterPro)
Tan01g2229 248 MobiDBLite consensus disorder prediction 42 131 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g2229 Tan-Chr1:26558044 Tan07g2022 Tan-Chr7:71862458 1.50E-66 dispersed
Tan01g2229 Tan-Chr1:26558044 Tan07g2014 Tan-Chr7:71862458 6.10E-65 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g2229 K09060 - csv:101206627 371.318