Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan01g2229 | ATGTCTCTGCTCAATCATGAGCATATTATGCCTCCTTATGGCACACCCCCACATCCATATGTTGCAATGTATCCCCTGGGATCGTATCCTTTTAGCCCATTTGCAATCCCCTCTCCAAATGGCATCACTGAGGCTTCTGGTAATACAGCAGGCAGCTTAGATGGGGAGGTTAAGCCACCTGAAGTAAAGGAAAAGCTGCCAATTAAAAGATCAAAAGGAAGTTTGGGCAGTTTGAACATGATTACAGGGAAGAACAATGAGCTCGGTAAAACATCTGGAACATCTGCTAATGGAGCATACTCTAAAAGTGGTGAGAGTGCCAGCGAAGGTACAAGTGAAGGAAGCGATGCCAATTCACAAAATGAATCACAACCTAAGTTAGGTTCCAGGCAAGACAATTTGGAAGTTGAAGCATCTCAGAATGGTAACTCTATGCATGGAGCTCAAAATGGAGGATCTAATACCCAGGCAATGGCTGTCATTCCATTGGCAGCTGCTGGGGCCCCGGGAGTCGTTCCTGGTCCCACAACAAACTTAAATATTGGAATGGACTATTGGGGTGCATCATCCACTATCCCTGCAATGCGTGGAAAGGTTCCATCGACTCCGGTTGCTGGAGGATTAGTTGGATCTCGGGATAGCGCACAGTCACAACTTTGGTTGCAGGTAGTCTCTAATAGACTCGAAATGTTCGCAATGAAAGTCTGGCTATTCATTTTTAAAAAGACTCGAAAAGTCGGTCTTTGA | 747 | 45.38 | MSLLNHEHIMPPYGTPPHPYVAMYPLGSYPFSPFAIPSPNGITEASGNTAGSLDGEVKPPEVKEKLPIKRSKGSLGSLNMITGKNNELGKTSGTSANGAYSKSGESASEGTSEGSDANSQNESQPKLGSRQDNLEVEASQNGNSMHGAQNGGSNTQAMAVIPLAAAGAPGVVPGPTTNLNIGMDYWGASSTIPAMRGKVPSTPVAGGLVGSRDSAQSQLWLQVVSNRLEMFAMKVWLFIFKKTRKVGL | 248 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 26558044 | 26562384 | - | Tan0009003.1 | Tan01g2229 | 739653 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan01g2229 | 248 | MobiDBLite | consensus disorder prediction | 75 | 131 | - | - | |
Tan01g2229 | 248 | Pfam | Disordered region downstream of MFMR | 64 | 191 | - | - | |
Tan01g2229 | 248 | PANTHER | G-BOX-BINDING FACTOR 3-RELATED | 7 | 209 | IPR044827 | GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0006355(InterPro)|GO:0043565(PANTHER)|GO:0043565(InterPro) | |
Tan01g2229 | 248 | MobiDBLite | consensus disorder prediction | 42 | 131 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan01g2229 | Tan-Chr1:26558044 | Tan07g2022 | Tan-Chr7:71862458 | 1.50E-66 | dispersed | |
Tan01g2229 | Tan-Chr1:26558044 | Tan07g2014 | Tan-Chr7:71862458 | 6.10E-65 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan01g2229 | K09060 | - | csv:101206627 | 371.318 |