Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g2262 ATGTTTACATGCATAGCATGTACGAAACAGACAGACGACGGGGGTGAGGATGGGGCTGCGCGTGGGAGTGGCACGCCTAGTACAAAGGAAGCCGTCAAAAGCCTGACAACGCAGATTAAGGACATGGCGTTGAAATTCTCTGGGGCTTATAGGCAGTGCAAACCCTGCACAGGCTCCAGTAGCTATAAGAAAGGACAGAGACCTTACCCAGACTTTGACACTGCTTCAGAAGGGGTTCCATACCCCTACATAGGAGGGGCAAGTGCAAGTTCAACACCTGCCTGGGACTTCCCTCCAGTGAATCGCCACCCACATACGAGATCTGACTCAAGATTTAAAGGAGTGTTCAGAGGAGACCAGACCCCTGGAGCCGATTCCACCATATCAGCATGTGATGTGGTGCTTGAGGATGAGGATGAGCCGAAAGAGTGGATGGCACAGGTGGAGCCTGGTGTTCACATTACTTTTGTGTCCCTACCCAATGGAGGCAATGATTTAAAACGAATTCGTTTCAATCGAGAAATGTTTAACAAATGGCAAGCTCAGCGATGGTGGGGCGAGAACTATGACAGAATAACGGAGCTCTATAATGTCCAGAGATTCAACCAACAAGCTCTTCATACGCCACCAAGAACTGAGGACGGGAGGGATTCATCTTACTCAAAGATGGGAAGGGATAGTCCGATGAGTTCAGCTAACAAAGATTGGACACCGAAAAACTACAAACCTTCTGGAAGTAAAGGTTATTTTCCATCTGACCAGCATTTTGATCATGGAAGCAGCCACGCCTATGCAGGGTCAAGTGCCTATCCAGCAGGCGGCGCGAAAGGCGACATGTCATCTATGGAAGCATCACGCACGACTACCTCTTCTAGAGACGAACCTTCAATTTCCGTTAGCAATGCAAGCGACATCGAAGCGGAGTGGGTCGAGGAAGATGAACCAGGGGTCTATATAACAATCAGGCAGCTTGTTGATGGCACTAGAGAGCTTCGTCGTGTCAGATTCAGCCGTGAAAGGTTTGGGGAGGTGAACGCGAAGCAATGGTGGGAACAGAACAGGGAGAGAATCCAAGCTCAATACCTATAA 1089 49.22 MFTCIACTKQTDDGGEDGAARGSGTPSTKEAVKSLTTQIKDMALKFSGAYRQCKPCTGSSSYKKGQRPYPDFDTASEGVPYPYIGGASASSTPAWDFPPVNRHPHTRSDSRFKGVFRGDQTPGADSTISACDVVLEDEDEPKEWMAQVEPGVHITFVSLPNGGNDLKRIRFNREMFNKWQAQRWWGENYDRITELYNVQRFNQQALHTPPRTEDGRDSSYSKMGRDSPMSSANKDWTPKNYKPSGSKGYFPSDQHFDHGSSHAYAGSSAYPAGGAKGDMSSMEASRTTTSSRDEPSISVSNASDIEAEWVEEDEPGVYITIRQLVDGTRELRRVRFSRERFGEVNAKQWWEQNRERIQAQYL 362
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 26891444 26897334 + Tan0021094.1 Tan01g2262 739686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g2262 362 Pfam Transcription factor BRX N-terminal domain 23 56 IPR027988 -
Tan01g2262 362 MobiDBLite consensus disorder prediction 96 124 - -
Tan01g2262 362 MobiDBLite consensus disorder prediction 11 30 - -
Tan01g2262 362 MobiDBLite consensus disorder prediction 281 298 - -
Tan01g2262 362 MobiDBLite consensus disorder prediction 223 240 - -
Tan01g2262 362 MobiDBLite consensus disorder prediction 274 298 - -
Tan01g2262 362 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 362 IPR044532 -
Tan01g2262 362 ProSiteProfiles BRX domain profile. 307 362 IPR013591 -
Tan01g2262 362 MobiDBLite consensus disorder prediction 203 254 - -
Tan01g2262 362 Pfam Transcription factor regulating root and shoot growth via Pin3 142 196 IPR013591 -
Tan01g2262 362 Pfam Transcription factor regulating root and shoot growth via Pin3 306 361 IPR013591 -
Tan01g2262 362 ProSiteProfiles BRX domain profile. 142 197 IPR013591 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g2262 Tan-Chr1:26891444 Tan08g0029 Tan-Chr8:474786 7.50E-80 dispersed
Tan01g2262 Tan-Chr1:26891444 Tan01g2263 Tan-Chr1:26895023 4.40E-189 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g2262 - - - 0.0