Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g2263 ATGGCGTTGAAATTCTCTGGGGCTTATAGGCAGTGCAAACCCTGCACAGGCTCCAGTAGCTATAAGAAAGGACAGAGACCTTACCCAGACTTTGACACTGCTTCAGAAGGGGTTCCATACCCCTACATAGGAGGGGCAAGTGCAAGTTCAACACCTGCCTGGGACTTCCCTCCAGTGAATCGCCACCCACATACGAGATCTGACTCAAGATTTAAAGGAGTGTTCAGAGGAGACCAGACCCCTGGAGCCGATTCCACCATATCAGCATGTGATGTGGTGCTTGAGGATGAGGATGAGCCGAAAGAGTGGATGGCACAGGTGGAGCCTGGTGTTCACATTACTTTTGTGTCCCTACCCAATGGAGGCAATGATTTAAAACGAATTCGTTTCAATCGAGAAATGTTTAACAAATGGCAAGCTCAGCGATGGTGGGGCGAGAACTATGACAGAATAACGGAGCTCTATAATGTCCAGAGATTCAACCAACAAGCTCTTCATACGCCACCAAGAACTGAGGACGGGAGGGATTCATCTTACTCAAAGATGGGAAGGGATAGTCCGATGAGTTCAGCTAACAAAGATTGGACACCGAAAAACTACAAACCTTCTGGAAGTAAAGGTTATTTTCCATCTGACCAGCATTTTGATCATGGAAGCAGCCACGCCTATGCAGGGTCAAGTGCCTATCCAGCAGGCGGCGCGAAAGGCGACATGTCATCTATGGAAGCATCACGCACGACTACCTCTTCTAGAGACGAACCTTCAATTTCCGTTAGCAATGCAAGCGACATCGAAGCGGAGTGGGTCGAGGAAGATGAACCAGGGGTCTATATAACAATCAGGCAGCTTGTTGATGGCACTAGAGAGCTTCGTCGTGTCAGATTCAGCCGTGAAAGGTTTGGGGAGGTGAACGCGAAGCAATGGTGGGAACAGAACAGGGAGAGAATCCAAGCTCAATACCTATAA 966 48.65 MALKFSGAYRQCKPCTGSSSYKKGQRPYPDFDTASEGVPYPYIGGASASSTPAWDFPPVNRHPHTRSDSRFKGVFRGDQTPGADSTISACDVVLEDEDEPKEWMAQVEPGVHITFVSLPNGGNDLKRIRFNREMFNKWQAQRWWGENYDRITELYNVQRFNQQALHTPPRTEDGRDSSYSKMGRDSPMSSANKDWTPKNYKPSGSKGYFPSDQHFDHGSSHAYAGSSAYPAGGAKGDMSSMEASRTTTSSRDEPSISVSNASDIEAEWVEEDEPGVYITIRQLVDGTRELRRVRFSRERFGEVNAKQWWEQNRERIQAQYL 321
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 26895023 26897334 + Tan0021094.2 Tan01g2263 739687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g2263 321 ProSiteProfiles BRX domain profile. 101 156 IPR013591 -
Tan01g2263 321 MobiDBLite consensus disorder prediction 162 213 - -
Tan01g2263 321 MobiDBLite consensus disorder prediction 233 257 - -
Tan01g2263 321 ProSiteProfiles BRX domain profile. 266 321 IPR013591 -
Tan01g2263 321 MobiDBLite consensus disorder prediction 1 34 - -
Tan01g2263 321 MobiDBLite consensus disorder prediction 182 199 - -
Tan01g2263 321 MobiDBLite consensus disorder prediction 240 257 - -
Tan01g2263 321 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 321 IPR044532 -
Tan01g2263 321 MobiDBLite consensus disorder prediction 55 83 - -
Tan01g2263 321 Pfam Transcription factor regulating root and shoot growth via Pin3 101 155 IPR013591 -
Tan01g2263 321 Pfam Transcription factor regulating root and shoot growth via Pin3 265 320 IPR013591 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g2263 Tan-Chr1:26895023 Tan08g0029 Tan-Chr8:474786 1.00E-72 dispersed
Tan01g2262 Tan-Chr1:26891444 Tan01g2263 Tan-Chr1:26895023 4.40E-189 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g2263 - - - 0.0