Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan01g2287 | ATGGGCAGGATGGGAGGTCGGCAAAGGACTTACAGCGCCAATTCCACCGATTATAAGCTTCTTGAAGAGATTGGTTTTGGTGCTAGTGCCACTGTTTTTCGAGCGATCTATACTCCGTCTAATGAAGTTGTCGCCATCAAGTGTTTGGATCTTGATCGCTGTAATAGTAATTTAGATGATATACGTAGGGAGGCTCAAACAATGAGTTTGATAGACCATCCCAACCTTGTAAGGGCTTTTTGTTCATTTGTTGTTGAACGAAACCTTTGGGTTGTCATGCCATTCATGGCAGAGGGTTCTTGTTTGCACCTAATGAAGACAGCGTACTCAGATGGATTTGAAGAGGTTGCTATTGGTTCTATTCTGAAAGAAACTCTTAAAGCTTTGGAGTACCTTCATCGACAGGGACACATACATCGGGATGTGAAGGCTGGGAATATACTACTTGATAGTAATGGGTCTGTGAAGCTTGCTGATTTTGGTGTTTCAGCTTGCATGTTTGATACAGGTGATAGACAGCGCTCCAGAAATACCTTTGTGGGAACCCCATGCTGGATGGCGCCGGAGGTATTGCAACCAGGAACGGGATATAATTCCAAGGCCGATATTTGGTCCTTTGGTATTACAGCGTTGGAGTTGGCTCATGGTCATGCACCATTTTCAAAATATCCTCCAATGAAGGTGCTTCTTATGACCATACAAAATGCTCCTCCTGGGCTGGATTATGATAGAGATAAAAAGTTCTCTAAGTCTTTTAAAGAAATGGTTGCGATGTGCCTGGTGAAAGATCAAACCAAGAGGCCAACAGCTGATAAACTTTTAAAGCACTCCTTTTTCAAGAATGCTAAGCCTCCCGAGCTTTCTTTGAAGAAATTATTTGCTAACTTGCCTCCTCTTTCACATCGTGTAAAGGATCTGCAGCTTAAAGATGCTGCCCAGCTAGCCTTAAAGAAAATGCCTTCAGCAGAGCAGGAAGCATTATCACAGAGTGAGTACCAGCGAGGAGTTAGTGCATGGAACTTCGATGTCGAGGATTTGAAAGCCCAAGCTTCCCTGGTGAATGATGAAATGGCAGAGATGAAGGAAGAGGAGGAGAATATAAATTCTTGTAATGCCAAGGATGCCTTTTGTCCTCAATCTAGTTTGAGGAATTTCAATTCATGTAATGAATTATCTCAGGATGAGCATGGAGTAGGAGCAAGTTGTCAGGGTTTGCCACAAGTGGAGTGCTCGAACAAAAAGGGTAACTTTGTGGAAGGTGATATGCTGAAAGCTGGGTTCCAAGAAAAAACTGGATGGAAGAGAAATGGAACAAGCACTGAAGCAGAAGCATCTACCTCTGGCCAAGACATTGTACAAGGGAAGACCAAAACCCAAATGCCAAAAGGTCGTCAAACTCAAAGTGGTCCACTTCTACCTGGTATTGTGCTTAGTCATTCTTTATCAGAAAGAGTGCGAGGCTCTGAGAGGTTTGATTCTGAAATTCAACCATCTACTGAAAAAAATCGTCGAGAAGCACGGCAAGCTCCAAGCTTCAGTGGGCCGCTGATGCTGCCAAACCGCGCCTCAGCAAACAGCCTATCAGCTCCCATAAAACCTTCTGGAGGGTTTAGAGATTCAATGGATGACAAATCGAAAGCTAATCTTGTGCAAATTAAGGGGCGTTTTTCAGTGACGTCAGAGAACCTAGATCTCGTAAAGGATATTCCATTGAGCACGGTTTCACGACGGTCTTCACAGAATTCACCTCTACGAAAGTCAGCTAGTGTCGGTGATTGGATATTCGATTCCAAGCAGCCTGTTAGCCAACCCTCTAAGGAGGCTTGCAACATCAACATGCCTACATCTATTCTTATGCCTCACCTTCAGAATCTTTTCCACCAGACCTCAATTCAACAGGATCTTATAGTGAACTTATTGAGTAGCTTGCAAACAGCAGACGTGGTCGATGCTACGCAAAATGGGAAGTTGCCTCCATTGCCTCGAAGCTTGGAGAATAATGGAAGTGTAAGTGCAATCAATGTTGAAACAGCAGCGGTTGAGAGAGAGCGTTTACTGCTCCGGAAGGTCTCCGAACTTCAAGCTAGAATGACGCATTTGACTTATGAATTGACTGCTGAAAAGTTGAAATACATTCAATTACAAGAACAGTTCAACTCGGCATCTGGTCAGGAAGAAAACGAGATCAAGAGGGAAGAGAATGTCTGA | 2208 | 43.75 | MGRMGGRQRTYSANSTDYKLLEEIGFGASATVFRAIYTPSNEVVAIKCLDLDRCNSNLDDIRREAQTMSLIDHPNLVRAFCSFVVERNLWVVMPFMAEGSCLHLMKTAYSDGFEEVAIGSILKETLKALEYLHRQGHIHRDVKAGNILLDSNGSVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGTGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTADKLLKHSFFKNAKPPELSLKKLFANLPPLSHRVKDLQLKDAAQLALKKMPSAEQEALSQSEYQRGVSAWNFDVEDLKAQASLVNDEMAEMKEEEENINSCNAKDAFCPQSSLRNFNSCNELSQDEHGVGASCQGLPQVECSNKKGNFVEGDMLKAGFQEKTGWKRNGTSTEAEASTSGQDIVQGKTKTQMPKGRQTQSGPLLPGIVLSHSLSERVRGSERFDSEIQPSTEKNRREARQAPSFSGPLMLPNRASANSLSAPIKPSGGFRDSMDDKSKANLVQIKGRFSVTSENLDLVKDIPLSTVSRRSSQNSPLRKSASVGDWIFDSKQPVSQPSKEACNINMPTSILMPHLQNLFHQTSIQQDLIVNLLSSLQTADVVDATQNGKLPPLPRSLENNGSVSAINVETAAVERERLLLRKVSELQARMTHLTYELTAEKLKYIQLQEQFNSASGQEENEIKREENV | 735 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 27409461 | 27423767 | - | Tan0021922.2 | Tan01g2287 | 739711 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan01g2287 | 735 | SMART | serkin_6 | 18 | 279 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan01g2287 | 735 | SUPERFAMILY | Protein kinase-like (PK-like) | 17 | 334 | IPR011009 | - | |
Tan01g2287 | 735 | MobiDBLite | consensus disorder prediction | 433 | 519 | - | - | |
Tan01g2287 | 735 | CDD | STKc_OSR1_SPAK | 17 | 279 | - | - | |
Tan01g2287 | 735 | ProSitePatterns | Protein kinases ATP-binding region signature. | 24 | 47 | IPR017441 | GO:0005524(InterPro) | |
Tan01g2287 | 735 | Gene3D | Phosphorylase Kinase; domain 1 | 7 | 95 | - | - | |
Tan01g2287 | 735 | PANTHER | SERINE/THREONINE-PROTEIN KINASE FRAY2 | 9 | 714 | IPR047173 | GO:0043539(InterPro) | |
Tan01g2287 | 735 | Coils | Coil | 343 | 373 | - | - | |
Tan01g2287 | 735 | Gene3D | Transferase(Phosphotransferase) domain 1 | 99 | 330 | - | - | |
Tan01g2287 | 735 | ProSiteProfiles | Protein kinase domain profile. | 18 | 279 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan01g2287 | 735 | Pfam | Protein kinase domain | 18 | 279 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan01g2287 | 735 | FunFam | serine/threonine-protein kinase BLUS1-like isoform X2 | 99 | 329 | - | - | |
Tan01g2287 | 735 | MobiDBLite | consensus disorder prediction | 483 | 507 | - | - | |
Tan01g2287 | 735 | FunFam | Serine/threonine-protein kinase BLUS1 | 7 | 95 | - | - | |
Tan01g2287 | 735 | MobiDBLite | consensus disorder prediction | 433 | 466 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan01g2287 | Tan-Chr1:27409461 | Tan11g0629 | Tan-Chr11:5528399 | 8.50E-147 | dispersed | |
Tan01g2286 | Tan-Chr1:27409461 | Tan01g2287 | Tan-Chr1:27409461 | 0.00E+00 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
67058 | PF00069 | Pkinase | 1.00E-60 | CL0016 | Tan | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan01g2287 | - | - | - | 0.0 |