Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g2287 ATGGGCAGGATGGGAGGTCGGCAAAGGACTTACAGCGCCAATTCCACCGATTATAAGCTTCTTGAAGAGATTGGTTTTGGTGCTAGTGCCACTGTTTTTCGAGCGATCTATACTCCGTCTAATGAAGTTGTCGCCATCAAGTGTTTGGATCTTGATCGCTGTAATAGTAATTTAGATGATATACGTAGGGAGGCTCAAACAATGAGTTTGATAGACCATCCCAACCTTGTAAGGGCTTTTTGTTCATTTGTTGTTGAACGAAACCTTTGGGTTGTCATGCCATTCATGGCAGAGGGTTCTTGTTTGCACCTAATGAAGACAGCGTACTCAGATGGATTTGAAGAGGTTGCTATTGGTTCTATTCTGAAAGAAACTCTTAAAGCTTTGGAGTACCTTCATCGACAGGGACACATACATCGGGATGTGAAGGCTGGGAATATACTACTTGATAGTAATGGGTCTGTGAAGCTTGCTGATTTTGGTGTTTCAGCTTGCATGTTTGATACAGGTGATAGACAGCGCTCCAGAAATACCTTTGTGGGAACCCCATGCTGGATGGCGCCGGAGGTATTGCAACCAGGAACGGGATATAATTCCAAGGCCGATATTTGGTCCTTTGGTATTACAGCGTTGGAGTTGGCTCATGGTCATGCACCATTTTCAAAATATCCTCCAATGAAGGTGCTTCTTATGACCATACAAAATGCTCCTCCTGGGCTGGATTATGATAGAGATAAAAAGTTCTCTAAGTCTTTTAAAGAAATGGTTGCGATGTGCCTGGTGAAAGATCAAACCAAGAGGCCAACAGCTGATAAACTTTTAAAGCACTCCTTTTTCAAGAATGCTAAGCCTCCCGAGCTTTCTTTGAAGAAATTATTTGCTAACTTGCCTCCTCTTTCACATCGTGTAAAGGATCTGCAGCTTAAAGATGCTGCCCAGCTAGCCTTAAAGAAAATGCCTTCAGCAGAGCAGGAAGCATTATCACAGAGTGAGTACCAGCGAGGAGTTAGTGCATGGAACTTCGATGTCGAGGATTTGAAAGCCCAAGCTTCCCTGGTGAATGATGAAATGGCAGAGATGAAGGAAGAGGAGGAGAATATAAATTCTTGTAATGCCAAGGATGCCTTTTGTCCTCAATCTAGTTTGAGGAATTTCAATTCATGTAATGAATTATCTCAGGATGAGCATGGAGTAGGAGCAAGTTGTCAGGGTTTGCCACAAGTGGAGTGCTCGAACAAAAAGGGTAACTTTGTGGAAGGTGATATGCTGAAAGCTGGGTTCCAAGAAAAAACTGGATGGAAGAGAAATGGAACAAGCACTGAAGCAGAAGCATCTACCTCTGGCCAAGACATTGTACAAGGGAAGACCAAAACCCAAATGCCAAAAGGTCGTCAAACTCAAAGTGGTCCACTTCTACCTGGTATTGTGCTTAGTCATTCTTTATCAGAAAGAGTGCGAGGCTCTGAGAGGTTTGATTCTGAAATTCAACCATCTACTGAAAAAAATCGTCGAGAAGCACGGCAAGCTCCAAGCTTCAGTGGGCCGCTGATGCTGCCAAACCGCGCCTCAGCAAACAGCCTATCAGCTCCCATAAAACCTTCTGGAGGGTTTAGAGATTCAATGGATGACAAATCGAAAGCTAATCTTGTGCAAATTAAGGGGCGTTTTTCAGTGACGTCAGAGAACCTAGATCTCGTAAAGGATATTCCATTGAGCACGGTTTCACGACGGTCTTCACAGAATTCACCTCTACGAAAGTCAGCTAGTGTCGGTGATTGGATATTCGATTCCAAGCAGCCTGTTAGCCAACCCTCTAAGGAGGCTTGCAACATCAACATGCCTACATCTATTCTTATGCCTCACCTTCAGAATCTTTTCCACCAGACCTCAATTCAACAGGATCTTATAGTGAACTTATTGAGTAGCTTGCAAACAGCAGACGTGGTCGATGCTACGCAAAATGGGAAGTTGCCTCCATTGCCTCGAAGCTTGGAGAATAATGGAAGTGTAAGTGCAATCAATGTTGAAACAGCAGCGGTTGAGAGAGAGCGTTTACTGCTCCGGAAGGTCTCCGAACTTCAAGCTAGAATGACGCATTTGACTTATGAATTGACTGCTGAAAAGTTGAAATACATTCAATTACAAGAACAGTTCAACTCGGCATCTGGTCAGGAAGAAAACGAGATCAAGAGGGAAGAGAATGTCTGA 2208 43.75 MGRMGGRQRTYSANSTDYKLLEEIGFGASATVFRAIYTPSNEVVAIKCLDLDRCNSNLDDIRREAQTMSLIDHPNLVRAFCSFVVERNLWVVMPFMAEGSCLHLMKTAYSDGFEEVAIGSILKETLKALEYLHRQGHIHRDVKAGNILLDSNGSVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGTGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTADKLLKHSFFKNAKPPELSLKKLFANLPPLSHRVKDLQLKDAAQLALKKMPSAEQEALSQSEYQRGVSAWNFDVEDLKAQASLVNDEMAEMKEEEENINSCNAKDAFCPQSSLRNFNSCNELSQDEHGVGASCQGLPQVECSNKKGNFVEGDMLKAGFQEKTGWKRNGTSTEAEASTSGQDIVQGKTKTQMPKGRQTQSGPLLPGIVLSHSLSERVRGSERFDSEIQPSTEKNRREARQAPSFSGPLMLPNRASANSLSAPIKPSGGFRDSMDDKSKANLVQIKGRFSVTSENLDLVKDIPLSTVSRRSSQNSPLRKSASVGDWIFDSKQPVSQPSKEACNINMPTSILMPHLQNLFHQTSIQQDLIVNLLSSLQTADVVDATQNGKLPPLPRSLENNGSVSAINVETAAVERERLLLRKVSELQARMTHLTYELTAEKLKYIQLQEQFNSASGQEENEIKREENV 735
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 27409461 27423767 - Tan0021922.2 Tan01g2287 739711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g2287 735 SMART serkin_6 18 279 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g2287 735 SUPERFAMILY Protein kinase-like (PK-like) 17 334 IPR011009 -
Tan01g2287 735 MobiDBLite consensus disorder prediction 433 519 - -
Tan01g2287 735 CDD STKc_OSR1_SPAK 17 279 - -
Tan01g2287 735 ProSitePatterns Protein kinases ATP-binding region signature. 24 47 IPR017441 GO:0005524(InterPro)
Tan01g2287 735 Gene3D Phosphorylase Kinase; domain 1 7 95 - -
Tan01g2287 735 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 9 714 IPR047173 GO:0043539(InterPro)
Tan01g2287 735 Coils Coil 343 373 - -
Tan01g2287 735 Gene3D Transferase(Phosphotransferase) domain 1 99 330 - -
Tan01g2287 735 ProSiteProfiles Protein kinase domain profile. 18 279 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g2287 735 Pfam Protein kinase domain 18 279 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g2287 735 FunFam serine/threonine-protein kinase BLUS1-like isoform X2 99 329 - -
Tan01g2287 735 MobiDBLite consensus disorder prediction 483 507 - -
Tan01g2287 735 FunFam Serine/threonine-protein kinase BLUS1 7 95 - -
Tan01g2287 735 MobiDBLite consensus disorder prediction 433 466 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g2287 Tan-Chr1:27409461 Tan11g0629 Tan-Chr11:5528399 8.50E-147 dispersed
Tan01g2286 Tan-Chr1:27409461 Tan01g2287 Tan-Chr1:27409461 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67058 PF00069 Pkinase 1.00E-60 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g2287 - - - 0.0