Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g2309 ATGGGAGAAGAGGGACGATCCTTGGCCGTGACCCCCACGTGGGCTTTTGCAACAGTGGTCACTCTCATGGTTTCTCTTGGATTCTTCTTCCAAGGCACATTGAAACGGACCAAAAAGTGGTTGAATAGGACGAAGAGAAAATCGTTACTCGCTGCGTTGGAGAAGATTAAAGAAGAGCTGATGCTCTTTGGACTTCTGTCGTTGTTGATGGGTCATTGGATTGTTTTTGTGGCAAGAATTTGTGTTAAGTCGTCTCTCTTGAGCAGCCGTTTCTATCCCTGTCCGTTGGATACTGATCTGAAACGAGTTAGACACATTTCTATTGCAAGTGAAAACATAAACAGTTCTTTTCCAAGAGAGCATAATAATGCTTGGATACGAGAGTATTGTCCTGAGGGTCGTGAATCGTTTGCTTCATACGAAAGTTTAGAGCAGCTTCATCGATTAATATTCGTTCTTGGAATCACCCATGTTTCTTATAGCTTCATTGCTATTGCCCTGGCCATGATTAAGATTTATGGCTGGAGAACATGGGAAAATGAAGCTAAGGCTTTGGCCACTCAGAATGCACAAGAAGAATCTGTACGAGCATCATCAACTGGACCAAAAATAAGGCGACTATCAACTTTTGTCTTTCACCATACCTCTCATCCATGGAGTCAGCATAGAGTCCTTGTTTGGCTGCTCTGTTTCAGCCGCCAGTTTTGGAGTTCTATTAATCGTGCTGATTATATGGCTTTGCGGTTGGGCTTCATCAGTACTCATCAACTCCCTATATCATATGACTTTCATAATTATATGCTTCGAAGCATGGAGGACGAATTTCGCGATATGGTTGGTATAAGTGTGCCACTCTGGATATATGCCATTGCCTGCATCTTCCTCAACTTCCACGGAAGCAACATTTACTTTTGGCTTTCCTTCCTCCCAGCCATTTTGATTCTGCTGATCGGGACGAAACTACACCGGGTAGTGGTAAAGTTGGCTGTAGAGTTTGTGGATACATCTCCAAGGGGATATTATTGTTTTAACTTGAGGGATGAACTATTTTGGTTTGGGAAGCCTAAGCTTCTTTTATGGTTGATTCAATTTATATCCTTCCAGAATGCTTTTGAGATGGCTACATTTATTTGGTCCCTGTGGGAAATTAGGGAACCCTCTTGTTTCATGGAGAACCAAACATATGTTGGTATCCGCTTGACCTTTGGGGTTATCACTCAGTTTTGGTGTAGCTTTATTACATTCCCACTCTATGTTATAGTCACTCAGATGGGGTCGAAGTTCAAGAAGTCGCTTGTGTCGGAGAATGTCCGAAAGTCGCTTCATCAATGGAAAAGAAGAGTGAAGGCAAGGCCAAGTGCTTCTTCCTCGGTTGCACTTATGGGTGCAACATCACTTGCATCCTCTGTTTGTACATTGGATGATGATGGCCAGACAATCGACGACTTTACCGTGAACTGCTCGGAAGGAAGCACGTCGAGCGCTGCCCCATACACACATTTCTCTCAGTTACTTCCACAAGCCTCGTCGGACGACACAGACATACAAATATCTGTTAGTTCTAGTCCTCCTCCTACCACATCCAACAACAAAAGAGATGAAGACAATTAG 1611 43.45 MGEEGRSLAVTPTWAFATVVTLMVSLGFFFQGTLKRTKKWLNRTKRKSLLAALEKIKEELMLFGLLSLLMGHWIVFVARICVKSSLLSSRFYPCPLDTDLKRVRHISIASENINSSFPREHNNAWIREYCPEGRESFASYESLEQLHRLIFVLGITHVSYSFIAIALAMIKIYGWRTWENEAKALATQNAQEESVRASSTGPKIRRLSTFVFHHTSHPWSQHRVLVWLLCFSRQFWSSINRADYMALRLGFISTHQLPISYDFHNYMLRSMEDEFRDMVGISVPLWIYAIACIFLNFHGSNIYFWLSFLPAILILLIGTKLHRVVVKLAVEFVDTSPRGYYCFNLRDELFWFGKPKLLLWLIQFISFQNAFEMATFIWSLWEIREPSCFMENQTYVGIRLTFGVITQFWCSFITFPLYVIVTQMGSKFKKSLVSENVRKSLHQWKRRVKARPSASSSVALMGATSLASSVCTLDDDGQTIDDFTVNCSEGSTSSAAPYTHFSQLLPQASSDDTDIQISVSSSPPPTTSNNKRDEDN 536
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 27876705 27882783 + Tan0022380.1 Tan01g2309 739733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g2309 536 PANTHER MLO-LIKE PROTEIN 1 2 459 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Tan01g2309 536 MobiDBLite consensus disorder prediction 510 529 - -
Tan01g2309 536 Pfam Mlo family 5 460 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Tan01g2309 536 MobiDBLite consensus disorder prediction 510 536 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g0784 Tan-Chr1:7484329 Tan01g2309 Tan-Chr1:27876705 3.00E-144 dispersed
Tan01g2309 Tan-Chr1:27876705 Tan01g4409 Tan-Chr1:109238628 9.60E-108 dispersed
Tan01g2309 Tan-Chr1:27876705 Tan01g2310 Tan-Chr1:27876705 9.00E-223 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g2309 K08472 - csv:101217051 942.569