Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g2315 ATGGCAGAAGAGGATACCCCCTCTGAAAGTTCTGAATCTTCTTCTTCTTCTTCAGCTCTCACCTCTCCAATGTCAACTCCCTTGAGGAAGGTGTTTTGTAGAATTTCAGGCCTTGCAACTTCTCTGAGAAGAAACACAGTCCCTCACAGTAGAAGAATCTTTCACAGAGATGTTGAACAGCAAGAGTTTCAATATGCAAGCTCTCATTGCCTCTCTTCTTACTACAGTGTCTTTGTTGCTCGCCTTGCCATAATGGTTATGCTAGCTATTTTGATTGGGCTGCTGACAATTCTCACATGGCATTTCACAAAGAGCTACACAGCGCAGTCACTGGACAGTTTAGCCTATGGTCTTCGCCATGAACTGCTGCAGCGCCCGATCTTACGGATGTGGAGTGTCTTGAATTCCACATCTGAAATAACCACAGCTCAGGTTAAGCTCTCAGAATATGTAATGAGGAAGTACAGCAAGCCTGCTAATCAAGCAGAGCAAGTTGAGTTGTATGAAGCAATGAGGGATGTTACGTGGGCGTTGTTTGCGAGTCGAAAAGCTCTTAATGCCATAACCATCAATTACAAGAATGGCTTTGTCCAGGCATTTCATCGAGATCATAGAAGCAACAATACGTTTTATATTTACTCAGATCTTGCAAACTATTCCATTAGTGCCACTGAATCGTATAATATCAATCGGCTTTCATCGGGTGAAGGATGGTCGGAGCCACCCATACATGGCAATGTTTCTGCAAAATGGTACAGGGAACCACTTGATCCTACTACCGGCGAGAAGATCGGGAAAGCAAGGCAAATCCCACCAGAGGATTTAATTAATATTGCTGGCATTTCCCAAGTGGCAGATGGTGTTGCCTCCTGGCATGTTACTGTGAGCAAGTACATGGATACACCATTGCTTTCGGCAGCCCTGCCTGTTTCTGATGCTTCGAATGAAAGCATAGTTGCAGTAGTGGGCGTTACAACCGCACTTTATAGTGTAGGTCAACTTATGAAGGAGCTTGTTGAGTTCCATAGTGGACATATTTATCTAACCTCTCAAGAGGGCTACTTGCTTGCTACTTCGGCCAATGCTCCCCTGTTAAGAAATACATCAAGGGGTTCAAAGCTTATGATGGCTGTCGATTCCCAGGATGATGTGATTCGATTAGGAGCAGAGTGGTTACAGAAAACCTATGGAAATAATTTTCCTCCTGGTCATGAGGTCCATGAAGAGAATGTCAAGCTTGGTGATCAACAATATTACATTGACTCATTTTTTCTTAATCTAAAAAGGCTTCCTATTGTGGGGGTTGTCATCATTCCTAGACAATACATAATGGGAAAGGTAGATGAGAGAGCTTTCAAAACATTGGTTATACTGATTTCTGCATCCTTGTGCATCTTAGTTATTGGATGCCTATGCATTTTGATTCTGACGAAAGGAGTATCTAAAGAAATGAAACTCAGAGCCGAACTAATAAGCCATCTTGATGCAAGAAGAAGGGCAGAGGCATCTAGTAATTACAAGAGTCAATTTCTAGCGAATATGAGTCATGAGCTGAGGACGCCGATGGCAGCAGTAATTGGACTGCTGGACATTCTAATGTGTGATGACTGTCTCAATAATGAACAATTTGCGACGGTTACTCAGATCAGAAAATGCTCAACAGCTCTACTTCGACTTCTCAACAACATTCTAGATCTAAGCAAGGTTGAATCTGGAAAGCTGGTTTTGGAAGATGCAGAGTTTGACCTGGGTCGAGAACTCGAAGGGCTTGTTGATATGTTCTCTGTGCAGTGCATTAACCATAATGTGGAGACTGTATTGGATCTCTCTGATGATATGCCTAGATTAGTACGAGGAGACTCTGGTCGAGTTGTTCAAATATTCACTAATTTGATCAGTAATTCTATCAAATTCACAACTACTGGTCACATCATTCTTCGAGGGTGGTGTGAGATGTCAAATACACTCAATGAAATGGGCAAGTTTTGTATTGATCAGAAGAAATCGCGATTTCCTAATCGGACAAAGATGAAACAGGGAGACCACCCAAAGAATGCCTGCAAGAAAGATAACAAAATGACCTTGTGGTTTGAACTTGATGACACTGGATGTGGGATTGATCCAAGCAAATGGGAGTCTGTTTTTGAAAGCTTTGAGCAAGCAGATCCCTCAACAACTCGCACGCATGGTGGCACGGGTCTTGGACTATGCATCGTACGTACCTTGGTCAACAAGATGGGTGGAGAAATCAAGGTTATAAAAAAGAACGGCCCGGGAACATTAATGCGACTTTACTTGGTTCTTAGCACGCCAGTAGATTCGACGGATCATCACTGTCAGCTTGATTTCGCAAAACATAATGCAGTGGTACTGCTTGCACTCCGTGGCAGCATGAGTCGATTAATCACATCACAGTGGCTTCGTAAAATCGGACTGCTCACTTTAGAAGCTTCAGAGTGGAATGAACTAACACTAATCCTTCAGGAACTCTTTCAAGCCAGAAGCTCAGAAACTAAAAAGGGATTTAGTCCACAGGATTCACTAGGAGAACTATTACGAGCAGAATTAATGAGAATTAAAGATATGAAAAGCCAAATATTCATCATTGTTGCCGATATCGGGATACTAGACTTGAGCACGGATATTTGGAAGGACCAACTTTACTTCCTTGACAAGTACTCTGGAAAAGCAAAATTTGCATGGATGTTAAACCACGATACGCCCAACGCCATTAAGATGGAGCTTCGAGGAAAAGGACACATTATAATGAACAATAAGCCACTGTACAAAGCAAAAATGATTCATATTTTGGAAACTGTTATGAAGGACAGAAACCTTGAGTTGCAGAAGAAAAATGCTTTAAGAACTGCATCAAAGGAAGGGGATTATCATGAATGTCTTGAAATTGATTCCACTCAGTTTGAAACTGCCAGCTCTGATGATTCTGATGTATCTGAACTTGGCAATTCCAACTCTCAGTGTGCAATGTTTCAAGTCAAAGACGATCAAGAAGAAACGATTGTGAAACCGTGTCAGTCACCATTTCCGCCCGCTAACAATAGCTTAGTTGAGTTAACTCATGTACATTCGAACGAGAGTAATGTGAGGAATGGCGATCTGTGTGACACAAGGCAAACCTCATCAAAGCCTCAATGCCAAAGTTCTGAATCCAATGGACAGAACTTGGTATTGAACTGTCCTACAAGCCAAGGAGAATCACATTCTAAGAACGTGCATGGCAAGAAATCTCTTGAAGGGGTACGCATTTTGCTTGCAGAAGATACACCAGTTCTCCAAAGAGTAACAACGATAATGCTTGAAAAGATGGGAGCAACGGTCATTGCTGTTGGAGATGGACTGCAGGCTGTAGAAGCTCTGACTGTCATGCTTAGTGCTGAAGAGCAAAGAAGGGAATGCCCCACAAGATATGACTTGATATTAATGGATTGCCAAGTAAGTACCAAATTACAGTTACCCTCCATGAGCCAAAATTGA 3495 42.23 MAEEDTPSESSESSSSSSALTSPMSTPLRKVFCRISGLATSLRRNTVPHSRRIFHRDVEQQEFQYASSHCLSSYYSVFVARLAIMVMLAILIGLLTILTWHFTKSYTAQSLDSLAYGLRHELLQRPILRMWSVLNSTSEITTAQVKLSEYVMRKYSKPANQAEQVELYEAMRDVTWALFASRKALNAITINYKNGFVQAFHRDHRSNNTFYIYSDLANYSISATESYNINRLSSGEGWSEPPIHGNVSAKWYREPLDPTTGEKIGKARQIPPEDLINIAGISQVADGVASWHVTVSKYMDTPLLSAALPVSDASNESIVAVVGVTTALYSVGQLMKELVEFHSGHIYLTSQEGYLLATSANAPLLRNTSRGSKLMMAVDSQDDVIRLGAEWLQKTYGNNFPPGHEVHEENVKLGDQQYYIDSFFLNLKRLPIVGVVIIPRQYIMGKVDERAFKTLVILISASLCILVIGCLCILILTKGVSKEMKLRAELISHLDARRRAEASSNYKSQFLANMSHELRTPMAAVIGLLDILMCDDCLNNEQFATVTQIRKCSTALLRLLNNILDLSKVESGKLVLEDAEFDLGRELEGLVDMFSVQCINHNVETVLDLSDDMPRLVRGDSGRVVQIFTNLISNSIKFTTTGHIILRGWCEMSNTLNEMGKFCIDQKKSRFPNRTKMKQGDHPKNACKKDNKMTLWFELDDTGCGIDPSKWESVFESFEQADPSTTRTHGGTGLGLCIVRTLVNKMGGEIKVIKKNGPGTLMRLYLVLSTPVDSTDHHCQLDFAKHNAVVLLALRGSMSRLITSQWLRKIGLLTLEASEWNELTLILQELFQARSSETKKGFSPQDSLGELLRAELMRIKDMKSQIFIIVADIGILDLSTDIWKDQLYFLDKYSGKAKFAWMLNHDTPNAIKMELRGKGHIIMNNKPLYKAKMIHILETVMKDRNLELQKKNALRTASKEGDYHECLEIDSTQFETASSDDSDVSELGNSNSQCAMFQVKDDQEETIVKPCQSPFPPANNSLVELTHVHSNESNVRNGDLCDTRQTSSKPQCQSSESNGQNLVLNCPTSQGESHSKNVHGKKSLEGVRILLAEDTPVLQRVTTIMLEKMGATVIAVGDGLQAVEALTVMLSAEEQRRECPTRYDLILMDCQVSTKLQLPSMSQN 1164
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 27902842 27908609 + Tan0017064.2 Tan01g2315 739739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g2315 1164 Gene3D - 494 573 - -
Tan01g2315 1164 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 561 766 IPR036890 -
Tan01g2315 1164 SUPERFAMILY CheY-like 1084 1152 IPR011006 -
Tan01g2315 1164 ProSiteProfiles Response regulatory domain profile. 1088 1164 IPR001789 GO:0000160(InterPro)
Tan01g2315 1164 MobiDBLite consensus disorder prediction 7 23 - -
Tan01g2315 1164 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 494 573 IPR036097 GO:0000155(InterPro)|GO:0007165(InterPro)
Tan01g2315 1164 SMART HKATPase_4 619 770 IPR003594 -
Tan01g2315 1164 PRINTS Bacterial sensor protein C-terminal signature 713 723 IPR004358 GO:0016310(InterPro)|GO:0016772(InterPro)
Tan01g2315 1164 PRINTS Bacterial sensor protein C-terminal signature 695 709 IPR004358 GO:0016310(InterPro)|GO:0016772(InterPro)
Tan01g2315 1164 PRINTS Bacterial sensor protein C-terminal signature 730 748 IPR004358 GO:0016310(InterPro)|GO:0016772(InterPro)
Tan01g2315 1164 Gene3D - 1068 1162 - -
Tan01g2315 1164 MobiDBLite consensus disorder prediction 1033 1062 - -
Tan01g2315 1164 Pfam His Kinase A (phospho-acceptor) domain 507 572 IPR003661 GO:0000155(InterPro)|GO:0007165(InterPro)
Tan01g2315 1164 ProSiteProfiles Histidine kinase domain profile. 513 770 IPR005467 -
Tan01g2315 1164 SMART HisKA_10 506 572 IPR003661 GO:0000155(InterPro)|GO:0007165(InterPro)
Tan01g2315 1164 PANTHER TWO-COMPONENT HISTIDINE KINASE 47 777 IPR050736 -
Tan01g2315 1164 FunFam Histidine kinase 1-like protein 494 573 - -
Tan01g2315 1164 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 619 767 IPR003594 -
Tan01g2315 1164 MobiDBLite consensus disorder prediction 1 23 - -
Tan01g2315 1164 CDD HisKA 507 568 IPR003661 GO:0000155(InterPro)|GO:0007165(InterPro)
Tan01g2315 1164 Gene3D - 574 771 IPR036890 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g2315 Tan-Chr1:27902842 Tan08g0665 Tan-Chr8:6613239 1.10E-52 dispersed
Tan01g2314 Tan-Chr1:27902842 Tan01g2315 Tan-Chr1:27902842 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g2315 - - - 0.0