Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g2387 ATGAACAAGACAATAAAAATCTTAATTCTCTGTCTTCTAATTTGTCTGTCTGTCTCTTCCAAGGCCAACGCTAACGATGTTTTTCCCACCCACGACGGTATGCACTCGGACTCCCCGCCGCCGCCGATGGGTCCCACCAGCGGAGGCTCCGGCGACGACATGCACTCTCACGGGATGCCGTCGTCGTCATCGGCGATGCACATGACTTTCTTTTGGGGGAAAAACACCCAAGTTCTCTTCTCCGGCTGGCCCGGCGACCAGTCCGGCATGTACGCGGTGGCGCTGGTGTTGGTATTTTTGCTGGCGGTGGCCGTCGAGTGGCTCTCGCACTGGCGGCTGATGACGGAGGTGGGGCCGAGAAATGTCGCCGCTGGAATTGTGCAGACTGCGGTGCATGGGATTCGGGTCGGAATTGCGTACATGGTGATGCTTGCATTGATGTCGTTCAACGGCGGCGTTTTTATTGTCGCCGTCGCCGGCCATTCAGTTGGGTTTCTTGTTTTTGGGAGCAGAGTTTTAAAGAAGACGAAATCGTCGTCCTACGATCAGGGTACCACCGATCTTCCATCTAGGGTTTGCTGA 582 55.33 MNKTIKILILCLLICLSVSSKANANDVFPTHDGMHSDSPPPPMGPTSGGSGDDMHSHGMPSSSSAMHMTFFWGKNTQVLFSGWPGDQSGMYAVALVLVFLLAVAVEWLSHWRLMTEVGPRNVAAGIVQTAVHGIRVGIAYMVMLALMSFNGGVFIVAVAGHSVGFLVFGSRVLKKTKSSSYDQGTTDLPSRVC 193
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 29114815 29115545 + Tan0006156.1 Tan01g2387 739811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g2387 193 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 64 178 IPR007274 GO:0005375(PANTHER)|GO:0005375(InterPro)|GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0035434(InterPro)
Tan01g2387 193 Pfam Ctr copper transporter family 121 168 IPR007274 GO:0005375(InterPro)|GO:0016020(InterPro)|GO:0035434(InterPro)
Tan01g2387 193 Pfam Ctr copper transporter family 68 114 IPR007274 GO:0005375(InterPro)|GO:0016020(InterPro)|GO:0035434(InterPro)
Tan01g2387 193 MobiDBLite consensus disorder prediction 29 61 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g2381 Tan-Chr1:29016334 Tan01g2387 Tan-Chr1:29114815 4.70E-32 dispersed
Tan01g2382 Tan-Chr1:29072689 Tan01g2387 Tan-Chr1:29114815 1.00E-33 dispersed
Tan01g2387 Tan-Chr1:29114815 Tan08g2055 Tan-Chr8:72677108 2.90E-30 dispersed
Tan01g2383 Tan-Chr1:29072689 Tan01g2387 Tan-Chr1:29114815 1.00E-33 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g2387 K14686 - csv:101214498 273.092