Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan01g2387 | ATGAACAAGACAATAAAAATCTTAATTCTCTGTCTTCTAATTTGTCTGTCTGTCTCTTCCAAGGCCAACGCTAACGATGTTTTTCCCACCCACGACGGTATGCACTCGGACTCCCCGCCGCCGCCGATGGGTCCCACCAGCGGAGGCTCCGGCGACGACATGCACTCTCACGGGATGCCGTCGTCGTCATCGGCGATGCACATGACTTTCTTTTGGGGGAAAAACACCCAAGTTCTCTTCTCCGGCTGGCCCGGCGACCAGTCCGGCATGTACGCGGTGGCGCTGGTGTTGGTATTTTTGCTGGCGGTGGCCGTCGAGTGGCTCTCGCACTGGCGGCTGATGACGGAGGTGGGGCCGAGAAATGTCGCCGCTGGAATTGTGCAGACTGCGGTGCATGGGATTCGGGTCGGAATTGCGTACATGGTGATGCTTGCATTGATGTCGTTCAACGGCGGCGTTTTTATTGTCGCCGTCGCCGGCCATTCAGTTGGGTTTCTTGTTTTTGGGAGCAGAGTTTTAAAGAAGACGAAATCGTCGTCCTACGATCAGGGTACCACCGATCTTCCATCTAGGGTTTGCTGA | 582 | 55.33 | MNKTIKILILCLLICLSVSSKANANDVFPTHDGMHSDSPPPPMGPTSGGSGDDMHSHGMPSSSSAMHMTFFWGKNTQVLFSGWPGDQSGMYAVALVLVFLLAVAVEWLSHWRLMTEVGPRNVAAGIVQTAVHGIRVGIAYMVMLALMSFNGGVFIVAVAGHSVGFLVFGSRVLKKTKSSSYDQGTTDLPSRVC | 193 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 29114815 | 29115545 | + | Tan0006156.1 | Tan01g2387 | 739811 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan01g2387 | 193 | PANTHER | SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS | 64 | 178 | IPR007274 | GO:0005375(PANTHER)|GO:0005375(InterPro)|GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0035434(InterPro) | |
Tan01g2387 | 193 | Pfam | Ctr copper transporter family | 121 | 168 | IPR007274 | GO:0005375(InterPro)|GO:0016020(InterPro)|GO:0035434(InterPro) | |
Tan01g2387 | 193 | Pfam | Ctr copper transporter family | 68 | 114 | IPR007274 | GO:0005375(InterPro)|GO:0016020(InterPro)|GO:0035434(InterPro) | |
Tan01g2387 | 193 | MobiDBLite | consensus disorder prediction | 29 | 61 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan01g2381 | Tan-Chr1:29016334 | Tan01g2387 | Tan-Chr1:29114815 | 4.70E-32 | dispersed | |
Tan01g2382 | Tan-Chr1:29072689 | Tan01g2387 | Tan-Chr1:29114815 | 1.00E-33 | dispersed | |
Tan01g2387 | Tan-Chr1:29114815 | Tan08g2055 | Tan-Chr8:72677108 | 2.90E-30 | dispersed | |
Tan01g2383 | Tan-Chr1:29072689 | Tan01g2387 | Tan-Chr1:29114815 | 1.00E-33 | proximal |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan01g2387 | K14686 | - | csv:101214498 | 273.092 |