Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g2414 ATGCTTCCTGTTCTTGTTTTGTTTGCTCTGTTTGTCCTCCTCCTTTGCCTCCAATGGCGCCACCCCAATCACAAACTCCTCCCTCCTGGCTCCATGGGTTGGCCTTACATAGGCGAAACCTTCAAACTCTACACTCAAAATCCAAATTCCTTCTTCTCCATTAGGCAAAAAAGATATGGGGATGTTTTCAAGACACACATATTGGGTTGTCCATGTGTGATGATTTCAAGTCCTGAGGCTGCAAGAGTTGTGCTTGTGAGTAAAGCTCATTTGTTTAAACCAACTTATCCACCAAGCAAAGAGAGAATGATAGGTCCTCAAGCTTTGTTCTTCCACCAAGGACCTTACCATTCTCGCCTTAAGAAGCTTGTTCAAGCTTCTTTTTTGCCCTCTGCTATCAAAGCCTCTGTTTCTCAAATTGAGAACATTGTGCTTCACCTTCTACCCTCTTGGAATAACACCCAAATCAACACCTTGCAACAAATGAAAAGGTTTGCTTTTGATGTGGCGATGATCTCAGCTTTCGGAGAGCAACAAGACTTGGAAATAGAGAGAATCAAACATCTGTATCAATGCCTTGAAAAAGGCTACAATTCAATGCCTCTCGATCTTCCCGGAACTCCTTTTCGAAAAGCAATGAAGGCGAGGAAGTTGCTGAGCGAGACATTGGGGAAACTGATAGAGAAAAGACGTGGGAGCAGGGCGGAGCAGGGCGGTGGACTGCTGGCGGTGCTATTGGGGGAGAAAGAAGAAGAAAAAAAAAACAAGCTGAGTGATTCACAAATAGCAGATAATATAATAGGAGTAATCTTTGCAGCTCAAGACACGACAGCCAGTGTTTTAACGTGGATTATCAAGTACTTACACGACAATCATCATCTTCTCCAAGCTGTTAAGAAGGAGCAGGTGGCAATTTTTGATCGGAAACTGTGCGACGGGAAGCGTGGGCTTACGTGGGATGATACCAGGCGTATGCCGTTGACCAGTCGGGTGATACAAGAAACCCTAAGAACAGCAAGTGTACTGTCATTCACATTCAGAGAAGCAGTAGAAGAAGTTGAATTTGAAGGTTATTTAATCCCAAGAGGATGGAAAGTTCTTCCACTCTTCAGAACCATTCATCACTCTCCTGATTTCTTCCCACACCCCGAGAAGTTTGATCCTTCAAGATTCGAGGTGCCACCTCGACCAAACACGTATATGCCATTTGGAAATGGAGTGCATTCGTGTCCAGGGAGTGAGATGGCTAAGCTTGAAATGCTTGTTCTTCTCCACCACCTCACCACCACTTACAGATGGAAAGTGGTGGGAGAGGAATCTGGGATACAGTATGGTCCATTTCCTGTGCCTAAAGGTGGCTTACCCATAAAAGTATTTTCAAGGAAGAAGAAGATTACTTCTTAG 1404 44.37 MLPVLVLFALFVLLLCLQWRHPNHKLLPPGSMGWPYIGETFKLYTQNPNSFFSIRQKRYGDVFKTHILGCPCVMISSPEAARVVLVSKAHLFKPTYPPSKERMIGPQALFFHQGPYHSRLKKLVQASFLPSAIKASVSQIENIVLHLLPSWNNTQINTLQQMKRFAFDVAMISAFGEQQDLEIERIKHLYQCLEKGYNSMPLDLPGTPFRKAMKARKLLSETLGKLIEKRRGSRAEQGGGLLAVLLGEKEEEKKNKLSDSQIADNIIGVIFAAQDTTASVLTWIIKYLHDNHHLLQAVKKEQVAIFDRKLCDGKRGLTWDDTRRMPLTSRVIQETLRTASVLSFTFREAVEEVEFEGYLIPRGWKVLPLFRTIHHSPDFFPHPEKFDPSRFEVPPRPNTYMPFGNGVHSCPGSEMAKLEMLVLLHHLTTTYRWKVVGEESGIQYGPFPVPKGGLPIKVFSRKKKITS 467
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
1 29923666 29931259 - Tan0003963.1 Tan01g2414 739838
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tan01g2414 467 SUPERFAMILY Cytochrome P450 24 461 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g2414 467 PRINTS P450 superfamily signature 410 421 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g2414 467 PRINTS P450 superfamily signature 272 289 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g2414 467 PRINTS P450 superfamily signature 330 341 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g2414 467 PRINTS P450 superfamily signature 401 410 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g2414 467 PANTHER CYTOCHROME P450 26 27 437 - GO:0004497(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER)
Tan01g2414 467 Gene3D Cytochrome P450 19 461 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g2414 467 FunFam Abscisic acid 8 18 460 - -
Tan01g2414 467 PRINTS E-class P450 group I signature 261 278 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g2414 467 PRINTS E-class P450 group I signature 400 410 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g2414 467 PRINTS E-class P450 group I signature 410 433 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g2414 467 PRINTS E-class P450 group I signature 56 75 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g2414 467 PRINTS E-class P450 group I signature 329 347 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g2414 467 PRINTS E-class P450 group I signature 369 393 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g2414 467 Pfam Cytochrome P450 28 438 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g2414 467 CDD CYP90-like 55 459 - -
Tan01g2414 467 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 403 412 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g1023 Tan-Chr1:9984575 Tan01g2414 Tan-Chr1:29923666 2.80E-164 dispersed
Tan01g1024 Tan-Chr1:9984575 Tan01g2414 Tan-Chr1:29923666 1.30E-153 dispersed
Tan01g2414 Tan-Chr1:29923666 Tan01g4795 Tan-Chr1:113861907 1.40E-150 dispersed
Tan01g2414 Tan-Chr1:29923666 Tan02g1829 Tan-Chr2:84360839 1.20E-151 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g2414 K09843 - csv:101216531 839.336