Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan01g2414 | ATGCTTCCTGTTCTTGTTTTGTTTGCTCTGTTTGTCCTCCTCCTTTGCCTCCAATGGCGCCACCCCAATCACAAACTCCTCCCTCCTGGCTCCATGGGTTGGCCTTACATAGGCGAAACCTTCAAACTCTACACTCAAAATCCAAATTCCTTCTTCTCCATTAGGCAAAAAAGATATGGGGATGTTTTCAAGACACACATATTGGGTTGTCCATGTGTGATGATTTCAAGTCCTGAGGCTGCAAGAGTTGTGCTTGTGAGTAAAGCTCATTTGTTTAAACCAACTTATCCACCAAGCAAAGAGAGAATGATAGGTCCTCAAGCTTTGTTCTTCCACCAAGGACCTTACCATTCTCGCCTTAAGAAGCTTGTTCAAGCTTCTTTTTTGCCCTCTGCTATCAAAGCCTCTGTTTCTCAAATTGAGAACATTGTGCTTCACCTTCTACCCTCTTGGAATAACACCCAAATCAACACCTTGCAACAAATGAAAAGGTTTGCTTTTGATGTGGCGATGATCTCAGCTTTCGGAGAGCAACAAGACTTGGAAATAGAGAGAATCAAACATCTGTATCAATGCCTTGAAAAAGGCTACAATTCAATGCCTCTCGATCTTCCCGGAACTCCTTTTCGAAAAGCAATGAAGGCGAGGAAGTTGCTGAGCGAGACATTGGGGAAACTGATAGAGAAAAGACGTGGGAGCAGGGCGGAGCAGGGCGGTGGACTGCTGGCGGTGCTATTGGGGGAGAAAGAAGAAGAAAAAAAAAACAAGCTGAGTGATTCACAAATAGCAGATAATATAATAGGAGTAATCTTTGCAGCTCAAGACACGACAGCCAGTGTTTTAACGTGGATTATCAAGTACTTACACGACAATCATCATCTTCTCCAAGCTGTTAAGAAGGAGCAGGTGGCAATTTTTGATCGGAAACTGTGCGACGGGAAGCGTGGGCTTACGTGGGATGATACCAGGCGTATGCCGTTGACCAGTCGGGTGATACAAGAAACCCTAAGAACAGCAAGTGTACTGTCATTCACATTCAGAGAAGCAGTAGAAGAAGTTGAATTTGAAGGTTATTTAATCCCAAGAGGATGGAAAGTTCTTCCACTCTTCAGAACCATTCATCACTCTCCTGATTTCTTCCCACACCCCGAGAAGTTTGATCCTTCAAGATTCGAGGTGCCACCTCGACCAAACACGTATATGCCATTTGGAAATGGAGTGCATTCGTGTCCAGGGAGTGAGATGGCTAAGCTTGAAATGCTTGTTCTTCTCCACCACCTCACCACCACTTACAGATGGAAAGTGGTGGGAGAGGAATCTGGGATACAGTATGGTCCATTTCCTGTGCCTAAAGGTGGCTTACCCATAAAAGTATTTTCAAGGAAGAAGAAGATTACTTCTTAG | 1404 | 44.37 | MLPVLVLFALFVLLLCLQWRHPNHKLLPPGSMGWPYIGETFKLYTQNPNSFFSIRQKRYGDVFKTHILGCPCVMISSPEAARVVLVSKAHLFKPTYPPSKERMIGPQALFFHQGPYHSRLKKLVQASFLPSAIKASVSQIENIVLHLLPSWNNTQINTLQQMKRFAFDVAMISAFGEQQDLEIERIKHLYQCLEKGYNSMPLDLPGTPFRKAMKARKLLSETLGKLIEKRRGSRAEQGGGLLAVLLGEKEEEKKNKLSDSQIADNIIGVIFAAQDTTASVLTWIIKYLHDNHHLLQAVKKEQVAIFDRKLCDGKRGLTWDDTRRMPLTSRVIQETLRTASVLSFTFREAVEEVEFEGYLIPRGWKVLPLFRTIHHSPDFFPHPEKFDPSRFEVPPRPNTYMPFGNGVHSCPGSEMAKLEMLVLLHHLTTTYRWKVVGEESGIQYGPFPVPKGGLPIKVFSRKKKITS | 467 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 29923666 | 29931259 | - | Tan0003963.1 | Tan01g2414 | 739838 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan01g2414 | 467 | SUPERFAMILY | Cytochrome P450 | 24 | 461 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g2414 | 467 | PRINTS | P450 superfamily signature | 410 | 421 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g2414 | 467 | PRINTS | P450 superfamily signature | 272 | 289 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g2414 | 467 | PRINTS | P450 superfamily signature | 330 | 341 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g2414 | 467 | PRINTS | P450 superfamily signature | 401 | 410 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g2414 | 467 | PANTHER | CYTOCHROME P450 26 | 27 | 437 | - | GO:0004497(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER) | |
| Tan01g2414 | 467 | Gene3D | Cytochrome P450 | 19 | 461 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g2414 | 467 | FunFam | Abscisic acid 8 | 18 | 460 | - | - | |
| Tan01g2414 | 467 | PRINTS | E-class P450 group I signature | 261 | 278 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g2414 | 467 | PRINTS | E-class P450 group I signature | 400 | 410 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g2414 | 467 | PRINTS | E-class P450 group I signature | 410 | 433 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g2414 | 467 | PRINTS | E-class P450 group I signature | 56 | 75 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g2414 | 467 | PRINTS | E-class P450 group I signature | 329 | 347 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g2414 | 467 | PRINTS | E-class P450 group I signature | 369 | 393 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g2414 | 467 | Pfam | Cytochrome P450 | 28 | 438 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g2414 | 467 | CDD | CYP90-like | 55 | 459 | - | - | |
| Tan01g2414 | 467 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 403 | 412 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan01g1023 | Tan-Chr1:9984575 | Tan01g2414 | Tan-Chr1:29923666 | 2.80E-164 | dispersed | |
| Tan01g1024 | Tan-Chr1:9984575 | Tan01g2414 | Tan-Chr1:29923666 | 1.30E-153 | dispersed | |
| Tan01g2414 | Tan-Chr1:29923666 | Tan01g4795 | Tan-Chr1:113861907 | 1.40E-150 | dispersed | |
| Tan01g2414 | Tan-Chr1:29923666 | Tan02g1829 | Tan-Chr2:84360839 | 1.20E-151 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan01g2414 | K09843 | - | csv:101216531 | 839.336 |