Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan01g2463 | ATGGATTTCTCTTCTGTTCCAGTCTATTTAGATCCTCCTCCCAATTGGCATCAGCAATCAAATCATCATCATCATCATCAGATAACCAATAATGGATCTCCTCAGCAACAGCACCTTCTTTCACTGCCAACTCAACAACAACTGCCCTCCCCACCGCTGCAATCTCATGTTTCTGGCGCCGGGGTTGGCTCGATCCGACGTGGTTCGATGGCAGACCGAGCTCGGCTCGCCAACGTGCCGCTACCAGAGACGGCGCTCAAGTGTCCTCGATGTGATTCCACCAACACCAAGTTCTGTTACTTTAATAACTATAGCCTCTCTCAGCCTCGCCACTTCTGCAAGACCTGCCGTCGATACTGGACTCGTGGTGGCGCCCTTCGGAATGTCCCGGTCGGGGGCGGTTGTCGTCGGAATAAGAAGAACAAGACTAGACGGTCGAAGTCTCCGGCGGCCGGGAATGATGTGCAGCTGAATAATAGTAACAATTCAAACTCACCCACCACTACAATTCCCTTGCACAGCAGTGCTGAGAATGTTATTGGACATTTACAGCCCCAACATCCTCACTTTTCATTCATGGCTTCATTGAATAATTTTTCTCGATACGGGACGACGAATTTAGGGGTGAATTTCAATGAGATCCAGGCTCAAGTGGGAGACATTGGAAACGGTGCCCTTCTAAATCATCATCAGTGGCGCAATTCCCAAAACTTTCCTCTCTCAGGTGGCCTAGAAACACCGACGGGGTTGTACCCGTTTCAAATTAGCGAAGGCAACAACAACAACACAACAAATTCAAATTCAAGGGCAACCCAGTTGCCTCCAGTGAAGATTGAAGAAACCCAAGTGCTGAATTTGTTGAAATCATCATCAAATTTGGGTGTTAACAATTCGGATAACCATCAATTTTGGAGCAATGGAAATGGCTGGACAGATCTTTCAGCTATCAGTTCTTCTTCAAGTGGCCATATTTCTTGCGACTTCAATCATTAA | 993 | 47.23 | MDFSSVPVYLDPPPNWHQQSNHHHHHQITNNGSPQQQHLLSLPTQQQLPSPPLQSHVSGAGVGSIRRGSMADRARLANVPLPETALKCPRCDSTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKKNKTRRSKSPAAGNDVQLNNSNNSNSPTTTIPLHSSAENVIGHLQPQHPHFSFMASLNNFSRYGTTNLGVNFNEIQAQVGDIGNGALLNHHQWRNSQNFPLSGGLETPTGLYPFQISEGNNNNTTNSNSRATQLPPVKIEETQVLNLLKSSSNLGVNNSDNHQFWSNGNGWTDLSAISSSSSGHISCDFNH | 330 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 31500586 | 31502726 | + | Tan0004423.1 | Tan01g2463 | 739887 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan01g2463 | 330 | MobiDBLite | consensus disorder prediction | 148 | 168 | - | - | |
Tan01g2463 | 330 | PANTHER | DOF ZINC FINGER PROTEIN DOF1.4-RELATED | 73 | 256 | IPR045174 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan01g2463 | 330 | MobiDBLite | consensus disorder prediction | 130 | 168 | - | - | |
Tan01g2463 | 330 | MobiDBLite | consensus disorder prediction | 25 | 54 | - | - | |
Tan01g2463 | 330 | Pfam | Dof domain, zinc finger | 85 | 140 | IPR003851 | GO:0003677(InterPro)|GO:0006355(InterPro) | |
Tan01g2463 | 330 | ProSitePatterns | Zinc finger Dof-type signature. | 88 | 124 | IPR003851 | GO:0003677(InterPro)|GO:0006355(InterPro) | |
Tan01g2463 | 330 | MobiDBLite | consensus disorder prediction | 11 | 65 | - | - | |
Tan01g2463 | 330 | ProSiteProfiles | Zinc finger Dof-type profile. | 86 | 140 | IPR003851 | GO:0003677(InterPro)|GO:0006355(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan01g2463 | Tan-Chr1:31500586 | Tan04g0300 | Tan-Chr4:2442933 | 9.60E-50 | dispersed | |
Tan01g1464 | Tan-Chr1:14846841 | Tan01g2463 | Tan-Chr1:31500586 | 1.30E-28 | transposed | |
Tan03g1776 | Tan-Chr3:73505418 | Tan01g2463 | Tan-Chr1:31500586 | 8.20E-30 | transposed | |
Tan01g2463 | Tan-Chr1:31500586 | Tan03g0966 | Tan-Chr3:66106338 | 2.20E-38 | wgd | |
Tan01g2463 | Tan-Chr1:31500586 | Tan05g0376 | Tan-Chr5:2744196 | 8.10E-49 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
26443 | PF02701 | zf-Dof | 2.20E-32 | No_clan | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan01g2463 | - | - | - | 0.0 |