Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g2463 ATGGATTTCTCTTCTGTTCCAGTCTATTTAGATCCTCCTCCCAATTGGCATCAGCAATCAAATCATCATCATCATCATCAGATAACCAATAATGGATCTCCTCAGCAACAGCACCTTCTTTCACTGCCAACTCAACAACAACTGCCCTCCCCACCGCTGCAATCTCATGTTTCTGGCGCCGGGGTTGGCTCGATCCGACGTGGTTCGATGGCAGACCGAGCTCGGCTCGCCAACGTGCCGCTACCAGAGACGGCGCTCAAGTGTCCTCGATGTGATTCCACCAACACCAAGTTCTGTTACTTTAATAACTATAGCCTCTCTCAGCCTCGCCACTTCTGCAAGACCTGCCGTCGATACTGGACTCGTGGTGGCGCCCTTCGGAATGTCCCGGTCGGGGGCGGTTGTCGTCGGAATAAGAAGAACAAGACTAGACGGTCGAAGTCTCCGGCGGCCGGGAATGATGTGCAGCTGAATAATAGTAACAATTCAAACTCACCCACCACTACAATTCCCTTGCACAGCAGTGCTGAGAATGTTATTGGACATTTACAGCCCCAACATCCTCACTTTTCATTCATGGCTTCATTGAATAATTTTTCTCGATACGGGACGACGAATTTAGGGGTGAATTTCAATGAGATCCAGGCTCAAGTGGGAGACATTGGAAACGGTGCCCTTCTAAATCATCATCAGTGGCGCAATTCCCAAAACTTTCCTCTCTCAGGTGGCCTAGAAACACCGACGGGGTTGTACCCGTTTCAAATTAGCGAAGGCAACAACAACAACACAACAAATTCAAATTCAAGGGCAACCCAGTTGCCTCCAGTGAAGATTGAAGAAACCCAAGTGCTGAATTTGTTGAAATCATCATCAAATTTGGGTGTTAACAATTCGGATAACCATCAATTTTGGAGCAATGGAAATGGCTGGACAGATCTTTCAGCTATCAGTTCTTCTTCAAGTGGCCATATTTCTTGCGACTTCAATCATTAA 993 47.23 MDFSSVPVYLDPPPNWHQQSNHHHHHQITNNGSPQQQHLLSLPTQQQLPSPPLQSHVSGAGVGSIRRGSMADRARLANVPLPETALKCPRCDSTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKKNKTRRSKSPAAGNDVQLNNSNNSNSPTTTIPLHSSAENVIGHLQPQHPHFSFMASLNNFSRYGTTNLGVNFNEIQAQVGDIGNGALLNHHQWRNSQNFPLSGGLETPTGLYPFQISEGNNNNTTNSNSRATQLPPVKIEETQVLNLLKSSSNLGVNNSDNHQFWSNGNGWTDLSAISSSSSGHISCDFNH 330
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 31500586 31502726 + Tan0004423.1 Tan01g2463 739887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g2463 330 MobiDBLite consensus disorder prediction 148 168 - -
Tan01g2463 330 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 73 256 IPR045174 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan01g2463 330 MobiDBLite consensus disorder prediction 130 168 - -
Tan01g2463 330 MobiDBLite consensus disorder prediction 25 54 - -
Tan01g2463 330 Pfam Dof domain, zinc finger 85 140 IPR003851 GO:0003677(InterPro)|GO:0006355(InterPro)
Tan01g2463 330 ProSitePatterns Zinc finger Dof-type signature. 88 124 IPR003851 GO:0003677(InterPro)|GO:0006355(InterPro)
Tan01g2463 330 MobiDBLite consensus disorder prediction 11 65 - -
Tan01g2463 330 ProSiteProfiles Zinc finger Dof-type profile. 86 140 IPR003851 GO:0003677(InterPro)|GO:0006355(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g2463 Tan-Chr1:31500586 Tan04g0300 Tan-Chr4:2442933 9.60E-50 dispersed
Tan01g1464 Tan-Chr1:14846841 Tan01g2463 Tan-Chr1:31500586 1.30E-28 transposed
Tan03g1776 Tan-Chr3:73505418 Tan01g2463 Tan-Chr1:31500586 8.20E-30 transposed
Tan01g2463 Tan-Chr1:31500586 Tan03g0966 Tan-Chr3:66106338 2.20E-38 wgd
Tan01g2463 Tan-Chr1:31500586 Tan05g0376 Tan-Chr5:2744196 8.10E-49 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
26443 PF02701 zf-Dof 2.20E-32 No_clan Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g2463 - - - 0.0