Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g2469 ATGGCGAAAATCCTAATTTCATCCTCACCCTTCGTTGGTTCCTCTCTCCCATCTCTCTCTCGCCATGGTCGTCTCCACACTCTTCCTCTCCGGAGACACGTCGCCACCAGAGTCAATTTCAGCTTCCATGAACTTCCCCCCATCCATACCTTTGATTCCTCCTTCAATTTTGAGGCAATTGTTAGCAGAGCCGAAGGCCTGCTCTACACACTTGCTGACGCAGCGGTTGCAGTGGATTCGACTGTTTCAGGTGGCGCGGCATCGAGTTCCGCTGATACTGCGGTGCAGAAGAATGGTGGATGGTTTGGATTCATCTCCGAGGCCATGGAAGTCGTTCTTAAAGTGTTGAAGGATGGACTTTCGGCTGTGCACGTGCCATATGCATATGGATTTGCAATCATATTACTTACTGTTATCGTTAAAATTGCAACTTTTCCCCTCACCAAGCAACAGGTTGAGTCAACATTGGCTATGCAAAATCTTCAACCAAAGATTAAAGCTATCCAACAAAGATATGCAGGCAATCAGGAAAGAATACAACTTGAGACGTCACGGCTTTATAGGCAAGCTGGAGTTAATCCTTTGGCAGGGTGTTTCCCAACTTTGGCCACCATACCAGTCTGGATTGGACTATATCAAGCCCTTTCTAATGTGGCAAATGAAGGATTATTCACTGAAGGTTTCTTTTGGATTCCCTCTCTTGGTGGACCAACTACTATTGCTGCTCGACAAAGTGGAGCTGGAATCTCTTGGTTGTTTCCTTTTGTGGATGGCCATCCACCATTGGGCTGGTCTGACACTGCAGCATACCTTGTATTACCTGTTCTCCTCGTCATATCTCAGTATGTATCGATGGAACTCATGAAGCCTCCCCAGACTGATGATCCAACACAAAAGAACACACTCCTTATTTTCAAGTTTCTTCCCCTCATGATTGGTTACTTCTCCTTGTCCGTTCCATCAGGATTATCAATTTACTGGTTCACAAACAATGTTCTCAGCACGGCTCAGCAAGTATGGTTACGCAAATTAGGAGGTGCAAAGCCTGTTGTAAGTGAGGATGCTGCTGGAATTATAACAGCAGGACGTGCCAAACGAACGTCTGAATCAGAAAGAACGGGTGACAGATTTAGGCAGTTGAGGGAAGAAGAGAAGAAGAATAAGTTAAGCAAGGCAGCTCGATCAGAAGAGATTCAAACTTTGGCTTCTGAGTCTGATAATGAGGATGGTTATGATGGGGAGACAACAGAGAAGGGTGAGGACAGTCTAGAAGAGGCATATGCATCAAGTGCAGACAAAGACATCCCAGTCTATAATCGACAAAAGAGAAGCAAGCGATCAAAGAGGAAACGTGCAGTATGA 1362 45.59 MAKILISSSPFVGSSLPSLSRHGRLHTLPLRRHVATRVNFSFHELPPIHTFDSSFNFEAIVSRAEGLLYTLADAAVAVDSTVSGGAASSSADTAVQKNGGWFGFISEAMEVVLKVLKDGLSAVHVPYAYGFAIILLTVIVKIATFPLTKQQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCFPTLATIPVWIGLYQALSNVANEGLFTEGFFWIPSLGGPTTIAARQSGAGISWLFPFVDGHPPLGWSDTAAYLVLPVLLVISQYVSMELMKPPQTDDPTQKNTLLIFKFLPLMIGYFSLSVPSGLSIYWFTNNVLSTAQQVWLRKLGGAKPVVSEDAAGIITAGRAKRTSESERTGDRFRQLREEEKKNKLSKAARSEEIQTLASESDNEDGYDGETTEKGEDSLEEAYASSADKDIPVYNRQKRSKRSKRKRAV 453
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 31844502 31852087 + Tan0003131.1 Tan01g2469 739893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g2469 453 Pfam 60Kd inner membrane protein 129 343 IPR028055 -
Tan01g2469 453 NCBIfam membrane protein insertase YidC 129 342 IPR028055 -
Tan01g2469 453 PANTHER OXA1 40 386 IPR001708 GO:0009535(PANTHER)|GO:0010027(PANTHER)|GO:0016020(InterPro)|GO:0032977(PANTHER)|GO:0032977(InterPro)|GO:0051205(PANTHER)|GO:0072598(PANTHER)
Tan01g2469 453 MobiDBLite consensus disorder prediction 383 453 - -
Tan01g2469 453 CDD 5TM_YidC_Alb3 130 343 IPR047196 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g2469 Tan-Chr1:31844502 Tan02g2141 Tan-Chr2:90845221 1.10E-117 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g2469 K03217 - csv:101217620 774.237