Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan01g2533 | ATGGCTGATGTTGGTCAGAACAACACCGCTGATTTTCCTGCTGTTCCTACCCATGGCGGTCAATATGTGCAGTACAATATCTTCGGGAATCCTTTTGAAATCACCTCCAAATATCGCCCGCCTATAATGCCAATAGGTCGCGGCGCCTACGGAATCGTCTGTTCGGTTTTGAATTCTGAGACCAACGAGATGGTTGCGATTAAGAAGATTGCCAACGCGTTTGATAATCATATGGATGCGAAGCGGACGCTCCGTGAGATTAAGCTTCTCCGCCATTTGGATCATGAAAATGTAATAGGCATAAGAGATGTGATTCCTCCACCTTTACGGAGAGAATTCAATGATGTCTACATTTCCAACGAACTCATGGATACTGATCTTCACCAAATAATCCGGTCCAACCAAAGTTTATCAGAAGAGCATTGTCAGTATTTCCTTTATCAGATTCTCCGAGGACTGAAATACATACATTCTGCAAATGTCATTCATCGAGATTTGAAACCGAGCAATTTATTGCTTAATGCGAACTGTGATCTTAAAATTTGCGACTTTGGTCTTGCTCGACCAACTTCAGAAAATGAATCCATGACAGAATATGTTGTTACAAGATGGTATAGGGCACCTGAGCTACTATTGAACTCTGATTATTCAGCTGCTATAGATATATGGTCTGTTGGTTGCATCTTTCTGGAGCTTATGAATAGAAGGCCTTTATTTCCAGGCAGGGATCATGTGCATCAGATGCGTTTATTGACTGAGCTTCTTGGCACACCAACCGAATCGGATCTTGGTTTTATTCGAAATGAAGACTCGAAAAGATATCTTCGGCAGCTACCTCCACATCCTCGTCAGCCATTAGCAACAGTTTTCCCTCATGTTCATCCACTGGCAATTGACCTTGTGGATAAAATGTTGACGTTTGACCCAACAAAGAGAATTACTGGTAAACATTAA | 954 | 41.93 | MADVGQNNTADFPAVPTHGGQYVQYNIFGNPFEITSKYRPPIMPIGRGAYGIVCSVLNSETNEMVAIKKIANAFDNHMDAKRTLREIKLLRHLDHENVIGIRDVIPPPLRREFNDVYISNELMDTDLHQIIRSNQSLSEEHCQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNANCDLKICDFGLARPTSENESMTEYVVTRWYRAPELLLNSDYSAAIDIWSVGCIFLELMNRRPLFPGRDHVHQMRLLTELLGTPTESDLGFIRNEDSKRYLRQLPPHPRQPLATVFPHVHPLAIDLVDKMLTFDPTKRITGKH | 317 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 35307169 | 35311365 | - | Tan0021708.1 | Tan01g2533 | 739957 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan01g2533 | 317 | ProSitePatterns | Protein kinases ATP-binding region signature. | 45 | 69 | IPR017441 | GO:0005524(InterPro) | |
Tan01g2533 | 317 | Pfam | Protein kinase domain | 44 | 315 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan01g2533 | 317 | SMART | serkin_6 | 39 | 316 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan01g2533 | 317 | Gene3D | Transferase(Phosphotransferase) domain 1 | 123 | 315 | - | - | |
Tan01g2533 | 317 | FunFam | Mitogen-activated protein kinase | 24 | 133 | - | - | |
Tan01g2533 | 317 | SUPERFAMILY | Protein kinase-like (PK-like) | 44 | 314 | IPR011009 | - | |
Tan01g2533 | 317 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE | 32 | 314 | IPR050117 | GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER) | |
Tan01g2533 | 317 | ProSiteProfiles | Protein kinase domain profile. | 39 | 317 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan01g2533 | 317 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 161 | 173 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan01g2533 | 317 | FunFam | Mitogen-activated protein kinase | 123 | 317 | - | - | |
Tan01g2533 | 317 | Gene3D | Phosphorylase Kinase; domain 1 | 22 | 122 | - | - | |
Tan01g2533 | 317 | ProSitePatterns | MAP kinase signature. | 74 | 177 | IPR003527 | GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan01g2533 | Tan-Chr1:35307169 | Tan02g2236 | Tan-Chr2:91350240 | 2.80E-147 | dispersed | |
Tan01g2533 | Tan-Chr1:35307169 | Tan01g2534 | Tan-Chr1:35307169 | 1.00E-149 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
67062 | PF00069 | Pkinase | 1.80E-70 | CL0016 | Tan | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan01g2533 | K20536 | - | csv:101202796 | 626.32 |