Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan01g2546 | ATGGAGAACGATTCTTCGGCTTTGGAGATCAAAGGCCTTTCGACTTTTGATGGAAAATACTTGCTCTACAACGTTCTCGGCAACTTCTTTGAGGTCTCCGCCAAGTACGCCCCTTCAATTCAACCTGTTGGACGCGGCGCTTACGGCATTGTTTGTTGTACGACGAATTCGGAGACGAAAGATGAGGTGGCGATTAAGAAGATAGGGAATGCTTTTGATAACAGGATTGATGCCAAGAGGACCCTTCGTGAGATTAAACTTCTATGCCATATGGACCATGACAATATTATAAAAATCAAAGACATAATTCCTCCACCAGAGAAGGAAAAATTCAATGATGTGTATATTGTGTATGAATTAATGGACACTGATCTGCATCAGATCATTCGCTCTACTCAGGCTCTGACAGATGATCACTGTCAGTACTTCTTATACCAATTACTCCGAGGTTTGAAGTATTTACACTCTGCAAATGTCTTGCACCGAGATCTAAAACCAAGCAACCTGCTTCTTAATGCAAATTGCGACCTCAAGATTTGTGACTTTGGGTTAGCAAGAACAACATCAGAGACAGATTTCATGACAGAATATGTTGTAACCAGATGGTATCGAGCCCCTGAGCTACTACTTAACACTTCTGAATACACTGCAGCGATAGATATTTGGTCGGTTGGATGTATTCTCATGGAGATTCTTAGGAGGGAGCCGCTGTTTCCCGGGAAAGACTATGTGCAGCAATTGGGGCTTATAACTGAGGTACTTATCGTCTTCAAGTTTTTGCCTGCTGTTTAA | 792 | 42.17 | MENDSSALEIKGLSTFDGKYLLYNVLGNFFEVSAKYAPSIQPVGRGAYGIVCCTTNSETKDEVAIKKIGNAFDNRIDAKRTLREIKLLCHMDHDNIIKIKDIIPPPEKEKFNDVYIVYELMDTDLHQIIRSTQALTDDHCQYFLYQLLRGLKYLHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWYRAPELLLNTSEYTAAIDIWSVGCILMEILRREPLFPGKDYVQQLGLITEVLIVFKFLPAV | 263 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 36574048 | 36575977 | + | Tan0013559.2 | Tan01g2546 | 739970 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan01g2546 | 263 | Gene3D | Transferase(Phosphotransferase) domain 1 | 121 | 254 | - | - | |
Tan01g2546 | 263 | Gene3D | Phosphorylase Kinase; domain 1 | 20 | 120 | - | - | |
Tan01g2546 | 263 | ProSitePatterns | Protein kinases ATP-binding region signature. | 43 | 67 | IPR017441 | GO:0005524(InterPro) | |
Tan01g2546 | 263 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE | 30 | 254 | IPR050117 | GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER) | |
Tan01g2546 | 263 | ProSitePatterns | MAP kinase signature. | 72 | 175 | IPR003527 | GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan01g2546 | 263 | ProSiteProfiles | Protein kinase domain profile. | 37 | 263 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan01g2546 | 263 | FunFam | Mitogen-activated protein kinase | 22 | 131 | - | - | |
Tan01g2546 | 263 | SUPERFAMILY | Protein kinase-like (PK-like) | 40 | 253 | IPR011009 | - | |
Tan01g2546 | 263 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 159 | 171 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan01g2546 | 263 | FunFam | Mitogen-activated protein kinase | 121 | 257 | - | - | |
Tan01g2546 | 263 | SMART | serkin_6 | 40 | 260 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan01g2546 | 263 | Pfam | Protein kinase domain | 41 | 244 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan01g2546 | Tan-Chr1:36574048 | Tan07g1607 | Tan-Chr7:67447195 | 4.60E-119 | dispersed | |
Tan01g2545 | Tan-Chr1:36574048 | Tan01g2546 | Tan-Chr1:36574048 | 1.10E-147 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
67065 | PF00069 | Pkinase | 1.60E-62 | CL0016 | Tan | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan01g2546 | K04371 | - | csv:101218403 | 485.337 |