Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g2551 ATGGGTTGCTTTCGTTGCACCGGTTCATCGAGCAAGAAATCGGAGGATATCGAACAAAACAACCCCAATACCTTCAATTCCAAAACCTACAAGCCTGATGATCGAACCCCTTCAGATAAAGCCAAAGTAAATTCAAGTTTGGCAGTGAAGAAGGATTCTGATGTGAAGGTGGTTGCGTCTAAAGATGACCAATTGGCTTTAGATGTAAAGAAATTGAACTTGAAAGATGAGGTTTCTAAGGAAGGAGAATCCAATGGCCGTGACAAGACTTTTACATTTGAAGAACTTGCAGCGGCTACGGGCAATTTCAGGTCAGATTGCTTCTTGGGTGAAGGAGGATTTGGAAAAGTTTACAAGGGGTACTTGCAGAAAGTTAATGAGGTTGTAGCGATCAAACAACTTGACCGAAATGGACTTCAAGGAATTCGGGAGTTCGTTGTGGAAGTCTTGACTTTAAGTCTGGCTGATCACCCTAACCTGGTAAAACTCATCGGCTTTTGTGCTGATGGGGATCAGAGGCTGTTGGTTTATGAATACATGCCATTGGGATCATTGGAAAACCATTTACATGATCTTCGACCCGGTGCAAAAGTAATTGATTGGAACACAAGAATGAAAATAGCAGCAGGTGCAGCGAGGGGTTTGGAATATTTGCACGAGAAGATGAAGCCCCCGGTTATATATCGTGATCTGAAATGCTCAAACATTTTGCTCAGTGAAGGGTATCATCCAAAGCTATCTGATTTTGGATTGGCTAAAGTAGGTCCCAGTGGGGATAAAACACATGTTTCAACCAGGGTTATGGGCACATATGGGTATTGTGCGCCGGATTATGCCATGACTGGCCAGCTGACATTCAAATCAGATATTTACAGCTTCGGTGTCGTATTATTGGAACTCATCACTGGAAGGAAAGCAATCGATCATTCAAAACCTCATTCAGAGCAAAATCTTGTGGCTTGGGTAAGATAG 972 42.8 MGCFRCTGSSSKKSEDIEQNNPNTFNSKTYKPDDRTPSDKAKVNSSLAVKKDSDVKVVASKDDQLALDVKKLNLKDEVSKEGESNGRDKTFTFEELAAATGNFRSDCFLGEGGFGKVYKGYLQKVNEVVAIKQLDRNGLQGIREFVVEVLTLSLADHPNLVKLIGFCADGDQRLLVYEYMPLGSLENHLHDLRPGAKVIDWNTRMKIAAGAARGLEYLHEKMKPPVIYRDLKCSNILLSEGYHPKLSDFGLAKVGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDHSKPHSEQNLVAWVR 323
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 36917313 36920015 + Tan0012193.2 Tan01g2551 739975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g2551 323 PANTHER OS07G0668900 PROTEIN 53 322 - -
Tan01g2551 323 ProSitePatterns Protein kinases ATP-binding region signature. 109 132 IPR017441 GO:0005524(InterPro)
Tan01g2551 323 Gene3D Transferase(Phosphotransferase) domain 1 180 323 - -
Tan01g2551 323 Pfam Protein kinase domain 108 315 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g2551 323 ProSitePatterns Serine/Threonine protein kinases active-site signature. 226 238 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan01g2551 323 Gene3D Phosphorylase Kinase; domain 1 88 179 - -
Tan01g2551 323 FunFam probable serine/threonine-protein kinase RLCKVII 75 179 - -
Tan01g2551 323 ProSiteProfiles Protein kinase domain profile. 103 323 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g2551 323 MobiDBLite consensus disorder prediction 1 45 - -
Tan01g2551 323 SMART serkin_6 103 322 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g2551 323 MobiDBLite consensus disorder prediction 7 31 - -
Tan01g2551 323 SUPERFAMILY Protein kinase-like (PK-like) 89 319 IPR011009 -
Tan01g2551 323 FunFam Serine/threonine-protein kinase PBS1 180 323 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g2551 Tan-Chr1:36917313 Tan08g1943 Tan-Chr8:71591498 3.00E-112 dispersed
Tan01g2550 Tan-Chr1:36917313 Tan01g2551 Tan-Chr1:36917313 2.60E-185 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67067 PF00069 Pkinase 2.00E-44 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g2551 - - - 0.0