Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan01g2551 | ATGGGTTGCTTTCGTTGCACCGGTTCATCGAGCAAGAAATCGGAGGATATCGAACAAAACAACCCCAATACCTTCAATTCCAAAACCTACAAGCCTGATGATCGAACCCCTTCAGATAAAGCCAAAGTAAATTCAAGTTTGGCAGTGAAGAAGGATTCTGATGTGAAGGTGGTTGCGTCTAAAGATGACCAATTGGCTTTAGATGTAAAGAAATTGAACTTGAAAGATGAGGTTTCTAAGGAAGGAGAATCCAATGGCCGTGACAAGACTTTTACATTTGAAGAACTTGCAGCGGCTACGGGCAATTTCAGGTCAGATTGCTTCTTGGGTGAAGGAGGATTTGGAAAAGTTTACAAGGGGTACTTGCAGAAAGTTAATGAGGTTGTAGCGATCAAACAACTTGACCGAAATGGACTTCAAGGAATTCGGGAGTTCGTTGTGGAAGTCTTGACTTTAAGTCTGGCTGATCACCCTAACCTGGTAAAACTCATCGGCTTTTGTGCTGATGGGGATCAGAGGCTGTTGGTTTATGAATACATGCCATTGGGATCATTGGAAAACCATTTACATGATCTTCGACCCGGTGCAAAAGTAATTGATTGGAACACAAGAATGAAAATAGCAGCAGGTGCAGCGAGGGGTTTGGAATATTTGCACGAGAAGATGAAGCCCCCGGTTATATATCGTGATCTGAAATGCTCAAACATTTTGCTCAGTGAAGGGTATCATCCAAAGCTATCTGATTTTGGATTGGCTAAAGTAGGTCCCAGTGGGGATAAAACACATGTTTCAACCAGGGTTATGGGCACATATGGGTATTGTGCGCCGGATTATGCCATGACTGGCCAGCTGACATTCAAATCAGATATTTACAGCTTCGGTGTCGTATTATTGGAACTCATCACTGGAAGGAAAGCAATCGATCATTCAAAACCTCATTCAGAGCAAAATCTTGTGGCTTGGGTAAGATAG | 972 | 42.8 | MGCFRCTGSSSKKSEDIEQNNPNTFNSKTYKPDDRTPSDKAKVNSSLAVKKDSDVKVVASKDDQLALDVKKLNLKDEVSKEGESNGRDKTFTFEELAAATGNFRSDCFLGEGGFGKVYKGYLQKVNEVVAIKQLDRNGLQGIREFVVEVLTLSLADHPNLVKLIGFCADGDQRLLVYEYMPLGSLENHLHDLRPGAKVIDWNTRMKIAAGAARGLEYLHEKMKPPVIYRDLKCSNILLSEGYHPKLSDFGLAKVGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDHSKPHSEQNLVAWVR | 323 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 36917313 | 36920015 | + | Tan0012193.2 | Tan01g2551 | 739975 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan01g2551 | 323 | PANTHER | OS07G0668900 PROTEIN | 53 | 322 | - | - | |
Tan01g2551 | 323 | ProSitePatterns | Protein kinases ATP-binding region signature. | 109 | 132 | IPR017441 | GO:0005524(InterPro) | |
Tan01g2551 | 323 | Gene3D | Transferase(Phosphotransferase) domain 1 | 180 | 323 | - | - | |
Tan01g2551 | 323 | Pfam | Protein kinase domain | 108 | 315 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan01g2551 | 323 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 226 | 238 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan01g2551 | 323 | Gene3D | Phosphorylase Kinase; domain 1 | 88 | 179 | - | - | |
Tan01g2551 | 323 | FunFam | probable serine/threonine-protein kinase RLCKVII | 75 | 179 | - | - | |
Tan01g2551 | 323 | ProSiteProfiles | Protein kinase domain profile. | 103 | 323 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan01g2551 | 323 | MobiDBLite | consensus disorder prediction | 1 | 45 | - | - | |
Tan01g2551 | 323 | SMART | serkin_6 | 103 | 322 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan01g2551 | 323 | MobiDBLite | consensus disorder prediction | 7 | 31 | - | - | |
Tan01g2551 | 323 | SUPERFAMILY | Protein kinase-like (PK-like) | 89 | 319 | IPR011009 | - | |
Tan01g2551 | 323 | FunFam | Serine/threonine-protein kinase PBS1 | 180 | 323 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan01g2551 | Tan-Chr1:36917313 | Tan08g1943 | Tan-Chr8:71591498 | 3.00E-112 | dispersed | |
Tan01g2550 | Tan-Chr1:36917313 | Tan01g2551 | Tan-Chr1:36917313 | 2.60E-185 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
67067 | PF00069 | Pkinase | 2.00E-44 | CL0016 | Tan | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan01g2551 | - | - | - | 0.0 |