Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g2617 ATGATTGTATCAGCTACGCCGAGCTCCAATGGCGGAATTGGAAGCGGAGAATTGTCGAGTTTTGTTCGACAAGTGGTGGTGGGGCGGTGGTTTTCCCTTTTCGCTTCGTTGATTATAATGTCCAGCGCCGGCGGAGTTTATTTGTTCGCTTATTACTCCAGAGAAATCAAAAGGACGCTCAAATGTGACCAAACGACGCTCAACAAGATTGGGTTTTACAAAGATTTGGGATCTAACGTCGGCGTTATCGCCGGCCTGCTGGCGGAGGTGGCGCCCACTTGGTTCGTTCTCCTCGTCGGCGCCGCCTTTAACTTCGTCGGCTATTTCAAGTTATGGCAGGCCGTCACCGGAAAAATTATCCGGCCGACCGTTGAGTATTTTTGCTTTTTCATTATGCTCGGAGCAAACTCTCAGAATTTCGCCAATACAGGAGTGCTGGTGACATGCGTGAAGAACTTCCCAGAAAGGAGAGGGGTGATGTTGGGGCTTCTAAAGGGGTTCGTGGGCCTAAGTGGGGCTATCATGACTCAACTTTACCTCGCCATTTATGGTCACGATACCAAGTCGCTAATTCTGCTCCTTGGCTGGCTCCCCTCTTTGATCTCTTTGTTTTTCTTTTACACAATCAGGGAAATGAAAGTCGTCAAACACCCAAATGAATTCAGAGTTTTCGTCCAGTTACTTTGCCTCTCCGTCGTCTTAGCTCTCTTTCTCACTTCCTTGATTTTCATTCAAAAAAGAGTTCAATTCGATCAATCAGCCCACATTGCAATCGTCGCTGCAATCCTCGCTCTGCTTTTTGTTCCTCTATTGATCGCCATTAGAGAAGAAATTGTCGTTTGGAATCTCAACAAAAGAACCATCCGCAATCCTTTCACCAGAATCAGAATCGATAAACAACAAATCCCAACTCCTGCTCCTTCCTCCTCATTACAACAACAAAACCAGAACAATTCCTGTTTCGCTTCCATTTTCAACAAACCCGAAAGAGGCGAAGACTACACAATTCCTCAAGCAATCTTCAGCATCGACATGCTGATCTTGTGCACCACGATGCTGATTGGGATCGGCGGAAGCTTGACCGCCATCGACAATCTCGGCCAAATCGGTGAATCCCTCGGTTACCCATCTGAAATAATCAACTCCTTCGTCTCTCTGATCAGCATTTTCAACTTCACCGGCAGAATCTTTTCTGGGTTCGTCTCGGAAATCTTGCTCGACAAGTTCAAATTCCCCAGGCCGTTGATGCTGACGCTCATCCTCTTGGTTTCGTGCATCGGCCACCTTTTGGTCGCCTTCCCCTTCGACGATTCGCTCTACGTTGCGTCCATCGTAATTGGGTTTTCAATGGGGTCTCAAGTTCCGTTGCATTTCGCCATGATTTCAGAGATTTTTGGGCTCAAACATTACTCCACATTGCTCAATTTTGGCCAATTGTTTTGCCCGATTGGCTCTTACATTCTGAACGTAATGGTAACTGGGAAGCTCTACGACGAGATGGCGAAGACTGGGATTGGTAGAAATAGAAGCAAGTTTCATTGCGAAGGGAGACACTGTTACGAACAATCGTTTACGATTTTGGCTGGGTTGACGTTTCTTGTGGCTGTGATATCGTTGGTTTTGGTGAAGAGAACGAGCGAGTTTTATAGAGGGGATTTATACAAGAAATTCAGGGAAGACATGGATTCTTTGAAGACGGAAGTTGAGTTTTATCAAGTGGATGAGAAGAGGACTAGGATTGGGAATTTACTTGTTGACAAACATACAATCAATTTCAAGAGATGA 1785 45.88 MIVSATPSSNGGIGSGELSSFVRQVVVGRWFSLFASLIIMSSAGGVYLFAYYSREIKRTLKCDQTTLNKIGFYKDLGSNVGVIAGLLAEVAPTWFVLLVGAAFNFVGYFKLWQAVTGKIIRPTVEYFCFFIMLGANSQNFANTGVLVTCVKNFPERRGVMLGLLKGFVGLSGAIMTQLYLAIYGHDTKSLILLLGWLPSLISLFFFYTIREMKVVKHPNEFRVFVQLLCLSVVLALFLTSLIFIQKRVQFDQSAHIAIVAAILALLFVPLLIAIREEIVVWNLNKRTIRNPFTRIRIDKQQIPTPAPSSSLQQQNQNNSCFASIFNKPERGEDYTIPQAIFSIDMLILCTTMLIGIGGSLTAIDNLGQIGESLGYPSEIINSFVSLISIFNFTGRIFSGFVSEILLDKFKFPRPLMLTLILLVSCIGHLLVAFPFDDSLYVASIVIGFSMGSQVPLHFAMISEIFGLKHYSTLLNFGQLFCPIGSYILNVMVTGKLYDEMAKTGIGRNRSKFHCEGRHCYEQSFTILAGLTFLVAVISLVLVKRTSEFYRGDLYKKFREDMDSLKTEVEFYQVDEKRTRIGNLLVDKHTINFKR 594
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 40420488 40423381 + Tan0003545.1 Tan01g2617 740041
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g2617 594 Pfam Major Facilitator Superfamily 348 545 IPR011701 GO:0022857(InterPro)|GO:0055085(InterPro)
Tan01g2617 594 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 28 558 - GO:0016020(PANTHER)
Tan01g2617 594 CDD MFS_Mch1p_like 28 535 - -
Tan01g2617 594 Gene3D MFS general substrate transporter like domains 340 549 IPR036259 -
Tan01g2617 594 SUPERFAMILY MFS general substrate transporter 29 546 IPR036259 -
Tan01g2617 594 Pfam Nodulin-like 29 274 IPR010658 -
Tan01g2617 594 Coils Coil 554 574 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g2617 Tan-Chr1:40420488 Tan01g2634 Tan-Chr1:41147199 8.30E-177 dispersed
Tan01g2616 Tan-Chr1:40396860 Tan01g2617 Tan-Chr1:40420488 4.00E-216 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g2617 - - - 0.0