Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g2625 ATGGGCAACGACGACCGAGGATCAGAAGTTTGGGGCTTCATCAAACAAGTAGTAGCAGGACGATGGTTTGCGGTATTCGCCTCGTTTTTGATGATGATCGGCAACGGTTCAACTTACATATTCGGAACATACTCGAAAGTTTTAAAGACAGAATTTAATTACAGTCAAACACAAGTTAACACATTGGGATTCGCCAAAGACCTCGGCTCTAACGTCGGAATTTTCGTCGGGCTTCTCGCTGAGGTGGCTCCGTTGTCGGTTATCTTTCTGATTGGCGCATTTCTCAATTTCTCCGGCTACTTCATGATTTGGCTCTCCATCACTCGCCGTATCTCCAAACCCAAATTCTGGCAAATATTCCTTTACATTTGCTTGGGTACTAATTCTTCAAATTTCGCCAACACCGCCATTATGGTCACTAGCCTTAGAAACTTCTCTGACCGACGAGGTATTATTTTGGGTCTTCTTAAAGGCTTTATTGGCATTGGAGGTGCTATTTTAACCCAATTTTATTTAGCCTTTTACGGCCCTGAAGACCCATCTAATCAAGTTTTTCTTTTCGCTTGGCTTCCCTCTACCGTAATCCTCCTCCTTTTCATGTCAATTCGACCTATTGATAAACCTAAACATCCCGAAGACCTCAAAGTCTTTTACCATTTACTTTACGTCTCTATAGTTCTTGCGCTTTTCATATTGTTTTTGACCATTGCACAAAAAGAAGTCACTTTCTCTCACGCTGGCTACACGAGTGGCGCATCCGTTATCGCTGGCTTGCTATTCTTACCCCTTCTCATTGCATTAAGAGAAGAATTCATGCTGTACAAACTCAACAAACAAAACGACGCTGATTCATTTATCACTGTTTCCTTTGTTGAAAAAAAACCTCCGGTAGTTGACAAATCCAAGTCCGCATTGGAGGAAATTGCTGAAATTTCGCCCTCGTGTTTCTCAAACATAATGAAGAACAAGCCTGCAAGAGGGGAGGATTTCACCATCTTCCAAGCTATGTTCAGCAAAGATATGGCTCTTATTTGGTTAGCTACTTTTTCTGGATGTGGGTCTTCTCTTGCCGCCATTGATAATGTAGGCCAAATTGGCGAATCACTTGGCTATCCAGCTCATGCCATAAGCATCTTCGTTTCATGGATTTCTGTCTTCAATTTCTTCGGCCGAGTCTTATCTGGTTTCATCTCTGAAACCTTGATGGTCAAATACAAATTACCTCGTCCACTAATCTTTGCTTTTGCCTTTCTCATCACTTGCATTGGCCAACTTTGTATCGCTTATCCATCGGCGGGTTCCGTCTACGTAGCTTCGTTGATCATTGGGTTTGGGTTTGGATGTCAAGGTACATTGCTATACGCCATAATCTCTGAGCTTTTTGGGCTCAAACATTACTCAACGTTGTTCAATTGTGCGCAATTGATAGTCCCATTTGGATCTTATATACTAAACGTGGATGTAGTGGGAAAGTTGTATGATATGGAAGCTTTACGTGAAGCTAAGAATAGGACGACTGGGAAGGGGATAACTTGCACCGGAGCTCATTGCTTTAGTGGGTCTTTCACAATTTTGGCTGCAGTGACATTGTTTGGGGCAGTGATCATGCTCGTTTTGGCTTATAGAACTCAAGAATTTTACAGAGGCGACGTATATAAGAAATACAAAGAAGACTTGTGGATTCCACAATCAGAAATGGAGTTTTATCGTTTGGATAGCAAGAAGAACTTATGTTAA 1737 41.91 MGNDDRGSEVWGFIKQVVAGRWFAVFASFLMMIGNGSTYIFGTYSKVLKTEFNYSQTQVNTLGFAKDLGSNVGIFVGLLAEVAPLSVIFLIGAFLNFSGYFMIWLSITRRISKPKFWQIFLYICLGTNSSNFANTAIMVTSLRNFSDRRGIILGLLKGFIGIGGAILTQFYLAFYGPEDPSNQVFLFAWLPSTVILLLFMSIRPIDKPKHPEDLKVFYHLLYVSIVLALFILFLTIAQKEVTFSHAGYTSGASVIAGLLFLPLLIALREEFMLYKLNKQNDADSFITVSFVEKKPPVVDKSKSALEEIAEISPSCFSNIMKNKPARGEDFTIFQAMFSKDMALIWLATFSGCGSSLAAIDNVGQIGESLGYPAHAISIFVSWISVFNFFGRVLSGFISETLMVKYKLPRPLIFAFAFLITCIGQLCIAYPSAGSVYVASLIIGFGFGCQGTLLYAIISELFGLKHYSTLFNCAQLIVPFGSYILNVDVVGKLYDMEALREAKNRTTGKGITCTGAHCFSGSFTILAAVTLFGAVIMLVLAYRTQEFYRGDVYKKYKEDLWIPQSEMEFYRLDSKKNLC 578
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 40770190 40771926 - Tan0000685.1 Tan01g2625 740049
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g2625 578 SUPERFAMILY MFS general substrate transporter 21 544 IPR036259 -
Tan01g2625 578 Gene3D MFS general substrate transporter like domains 340 548 IPR036259 -
Tan01g2625 578 Gene3D MFS general substrate transporter like domains 16 212 IPR036259 -
Tan01g2625 578 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 20 556 - GO:0016020(PANTHER)
Tan01g2625 578 Pfam Nodulin-like 21 266 IPR010658 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g2625 Tan-Chr1:40770190 Tan07g0986 Tan-Chr7:23200880 1.30E-254 dispersed
Tan01g2621 Tan-Chr1:40609996 Tan01g2625 Tan-Chr1:40770190 1.20E-93 proximal
Tan01g2625 Tan-Chr1:40770190 Tan01g2626 Tan-Chr1:40868666 1.30E-299 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g2625 - - - 0.0