Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan01g2640 | ATGTCTAATAACGTAGAGGGTTCTCCAGGAAGCTCGATGCATGGAGTGACTGGGAAAGAGCAAACATTTGCGTTCTCAGTTGCATCCCCAATAGTCCCAACTGATACAACTGCTAAATTTGCATTACCAGTTGATTCAGAACACAAGGCGAAAGTGTTCAAGCTTTTCTCATTAGCAAATCCACACATGAGAACCTTTCACCTTTCATGGATTTCATTTTTCACATGCTTCGTTTCGACATTTGCAGCAGCCCCACTTGTACCCATCATCCGTGATAATCTAAACTTGACCAAAGTTGACATTGGTAACGCTGGTGTTACTTCTGTCTCTGGAAGTATATTCTCTCGTCTTGTTATGGGAGCTGTTTGTGACCTTTTAGGTCCTCGCTATGGCTGTGCTTTTCTCATTATGTTGTCTGCTCCCACTGTGTTTTGTATGTCTTTTGTTTCTTCTGCTGGTGGTTACATTGCTGTTAGATTCATGATTGGTTTCTCCCTTGCTACCTTTGTCTCCTGTCAATATTGGATGAGTACTATGTTCAACAGTCAAATCATTGGCCTTGTCAATGGTACTGCTGCTGGTTGGGGTAATATGGGTGGAGGAGCCACTCAACTCATTATGCCTTTGCTCTATGATATTATTAAGAGAGCTGGTGCTACTCCTTTCACTGCTTGGAGGATTGCTTTCTTTATCCCTGGTTCCCTTCATGTTATTATGGGCATTTTGGTTTTGACTCTTGGCCAAGACTTGCCCGATGGCAACCTTAGCAGCCTTCAGAAGAAGGGTAATGTTGCCAAAGATAAATTCTCCAATGTTCTATGGTATGCTGTGACTAATTACAGAACTTGGATCTTCGTCCTCCTGTATGGCTACTCAATGGGGGTTGAACTTTCCACGGATAATGTTATTGCTGAATATTTCTACGATAGGTTTGATCTAAAGCTGCACACGGCTGGGATTATAGCAGCAACATTCGGGATGGCTAATCTAGTGGCTCGACCCTTTGGAGGGTATGCATCGGACTACGCAGCTCGTTATTTCGGGATGAGAGGAAGACTATGGACTCTATGGATTCTCCAAACATTTGGGGGAGTGTTTTGCATGTGGCTTGGTAAAGCAAATAAGCTTCCAACAGCTATAGTAGCTATGATCTTGTTTTCAATTGGAGCTCAAGCCGCATGTGGAGCCACTTTTGGAATTATTCCCTTTATTTCTCGCCGCTCTTTGGGAATTATATCAGGTTTAACAGGAGCTGGTGGAAACTTTGGATCGGGTTTAACCCAATTAGTGTTCTTCTCAACCTCAAAATACTCGACAGATACAGGGTTGTTTTTGATGGGAATAATGATTGTTTGTTGCACTCTTCCAGTCACTTTGGTTCATTTTCCTCAATGGGGAAGCATGTTCTTACCACCAACTAAACACGTTGACAAATCAACTGAAGAATTCTACTATGGTTCTGAATGGACTGACGATGAAAAGAAGAAGGGTTTGCACCAACAAAGCATTAAGTTTGCTGAGAACAGCAGATCTGAACGTGGAAGGCGTGTTTCCTCAGCTCCAACTCCCCCCAATACCACTCCTTCTCATGTTTGA | 1596 | 42.92 | MSNNVEGSPGSSMHGVTGKEQTFAFSVASPIVPTDTTAKFALPVDSEHKAKVFKLFSLANPHMRTFHLSWISFFTCFVSTFAAAPLVPIIRDNLNLTKVDIGNAGVTSVSGSIFSRLVMGAVCDLLGPRYGCAFLIMLSAPTVFCMSFVSSAGGYIAVRFMIGFSLATFVSCQYWMSTMFNSQIIGLVNGTAAGWGNMGGGATQLIMPLLYDIIKRAGATPFTAWRIAFFIPGSLHVIMGILVLTLGQDLPDGNLSSLQKKGNVAKDKFSNVLWYAVTNYRTWIFVLLYGYSMGVELSTDNVIAEYFYDRFDLKLHTAGIIAATFGMANLVARPFGGYASDYAARYFGMRGRLWTLWILQTFGGVFCMWLGKANKLPTAIVAMILFSIGAQAACGATFGIIPFISRRSLGIISGLTGAGGNFGSGLTQLVFFSTSKYSTDTGLFLMGIMIVCCTLPVTLVHFPQWGSMFLPPTKHVDKSTEEFYYGSEWTDDEKKKGLHQQSIKFAENSRSERGRRVSSAPTPPNTTPSHV | 531 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 41742968 | 41745339 | + | Tan0002796.1 | Tan01g2640 | 740064 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan01g2640 | 531 | Gene3D | MFS general substrate transporter like domains | 265 | 467 | IPR036259 | - | |
Tan01g2640 | 531 | SUPERFAMILY | MFS general substrate transporter | 60 | 461 | IPR036259 | - | |
Tan01g2640 | 531 | PANTHER | HIGH-AFFINITY NITRATE TRANSPORTER 2.3 | 8 | 516 | IPR044772 | GO:0005886(PANTHER)|GO:0015112(PANTHER)|GO:0015112(InterPro)|GO:0015706(PANTHER)|GO:0071249(PANTHER) | |
Tan01g2640 | 531 | FunFam | Nitrate transporter 2.1 | 266 | 467 | - | - | |
Tan01g2640 | 531 | ProSiteProfiles | Major facilitator superfamily (MFS) profile. | 65 | 459 | IPR020846 | GO:0022857(InterPro) | |
Tan01g2640 | 531 | CDD | MFS_NRT2_like | 66 | 459 | IPR044772 | GO:0015112(InterPro) | |
Tan01g2640 | 531 | Gene3D | MFS general substrate transporter like domains | 59 | 255 | IPR036259 | - | |
Tan01g2640 | 531 | MobiDBLite | consensus disorder prediction | 492 | 514 | - | - | |
Tan01g2640 | 531 | FunFam | High affinity nitrate transporter | 58 | 255 | - | - | |
Tan01g2640 | 531 | MobiDBLite | consensus disorder prediction | 492 | 531 | - | - | |
Tan01g2640 | 531 | MobiDBLite | consensus disorder prediction | 515 | 531 | - | - | |
Tan01g2640 | 531 | Pfam | Major Facilitator Superfamily | 70 | 426 | IPR011701 | GO:0022857(InterPro)|GO:0055085(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan01g2640 | Tan-Chr1:41742968 | Tan04g1272 | Tan-Chr4:12235256 | 2.10E-163 | dispersed | |
Tan01g2640 | Tan-Chr1:41742968 | Tan01g2641 | Tan-Chr1:41765865 | 4.30E-302 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan01g2640 | K02575 | - | csv:101218244 | 1033.48 |