Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g2667 ATGGCTTCGGCTCCTAAAGAATCTCCGGCGAACAATCCGGGACTTCACGCTACCCCTGACGATGCCACTAAAGGTTACATCATGCAACAGACTATGTTTCGGATTAAGGATCCTAAAGCCAGTCTTGACTTCTATTCTCGAGTTCTGGGCATGTCACTACTCAAGAGACTGGATTTTCCTGAAATGAAGTTTAGCCTGTACTTTTTGGGTTATGAGGATCCTGCTTCTGCTCCAGACAGCTCGGTTGATAGAACAGTCTGGACTTTTGGTCGAAAGGCTACAATTGAGTTAACACACAACTGGGGTACTGAAAGTGACCCTGAATTTAAAGGATATCATAATGGGAACTCAGATCCTCGTGGCTTTGGACACATTGGTATAACTGTTGACGACACATTTAAGGCGTGTGAGAGATTTGAACGCCTAGGAGTGGAATTTGTTAAAAAACCAGATGATGGCAAAATGAAAGGAATTGCATTTATAAAGGATCCTGATGGCTACTGGATTGAAATCTTTGACCTCAAAACTATTGGAAAAATTACTACTGATGCTGCTTGA 558 42.47 MASAPKESPANNPGLHATPDDATKGYIMQQTMFRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDPASAPDSSVDRTVWTFGRKATIELTHNWGTESDPEFKGYHNGNSDPRGFGHIGITVDDTFKACERFERLGVEFVKKPDDGKMKGIAFIKDPDGYWIEIFDLKTIGKITTDAA 185
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 43722506 43727417 + Tan0002705.1 Tan01g2667 740091
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g2667 185 MobiDBLite consensus disorder prediction 1 21 - -
Tan01g2667 185 ProSitePatterns Glyoxalase I signature 2. 115 131 IPR018146 GO:0004462(InterPro)|GO:0046872(InterPro)
Tan01g2667 185 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 27 174 IPR037523 -
Tan01g2667 185 CDD GlxI_Zn 28 172 - -
Tan01g2667 185 ProSitePatterns Glyoxalase I signature 1. 30 51 IPR018146 GO:0004462(InterPro)|GO:0046872(InterPro)
Tan01g2667 185 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 18 173 IPR029068 -
Tan01g2667 185 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 29 171 IPR004360 -
Tan01g2667 185 Gene3D - 5 180 IPR029068 -
Tan01g2667 185 PANTHER LACTOYLGLUTATHIONE LYASE GLYOXALASE I 3 179 - -
Tan01g2667 185 NCBIfam lactoylglutathione lyase 28 175 IPR004361 GO:0004462(InterPro)|GO:0046872(InterPro)
Tan01g2667 185 FunFam Lactoylglutathione lyase 1 181 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g2667 Tan-Chr1:43722506 Tan01g2669 Tan-Chr1:43722506 3.30E-108 dispersed
Tan01g2667 Tan-Chr1:43722506 Tan01g2668 Tan-Chr1:43722506 3.30E-108 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g2667 K01759 - csv:101220380 369.392