Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan01g2667 | ATGGCTTCGGCTCCTAAAGAATCTCCGGCGAACAATCCGGGACTTCACGCTACCCCTGACGATGCCACTAAAGGTTACATCATGCAACAGACTATGTTTCGGATTAAGGATCCTAAAGCCAGTCTTGACTTCTATTCTCGAGTTCTGGGCATGTCACTACTCAAGAGACTGGATTTTCCTGAAATGAAGTTTAGCCTGTACTTTTTGGGTTATGAGGATCCTGCTTCTGCTCCAGACAGCTCGGTTGATAGAACAGTCTGGACTTTTGGTCGAAAGGCTACAATTGAGTTAACACACAACTGGGGTACTGAAAGTGACCCTGAATTTAAAGGATATCATAATGGGAACTCAGATCCTCGTGGCTTTGGACACATTGGTATAACTGTTGACGACACATTTAAGGCGTGTGAGAGATTTGAACGCCTAGGAGTGGAATTTGTTAAAAAACCAGATGATGGCAAAATGAAAGGAATTGCATTTATAAAGGATCCTGATGGCTACTGGATTGAAATCTTTGACCTCAAAACTATTGGAAAAATTACTACTGATGCTGCTTGA | 558 | 42.47 | MASAPKESPANNPGLHATPDDATKGYIMQQTMFRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDPASAPDSSVDRTVWTFGRKATIELTHNWGTESDPEFKGYHNGNSDPRGFGHIGITVDDTFKACERFERLGVEFVKKPDDGKMKGIAFIKDPDGYWIEIFDLKTIGKITTDAA | 185 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 43722506 | 43727417 | + | Tan0002705.1 | Tan01g2667 | 740091 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan01g2667 | 185 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Tan01g2667 | 185 | ProSitePatterns | Glyoxalase I signature 2. | 115 | 131 | IPR018146 | GO:0004462(InterPro)|GO:0046872(InterPro) | |
Tan01g2667 | 185 | ProSiteProfiles | Vicinal oxygen chelate (VOC) domain profile. | 27 | 174 | IPR037523 | - | |
Tan01g2667 | 185 | CDD | GlxI_Zn | 28 | 172 | - | - | |
Tan01g2667 | 185 | ProSitePatterns | Glyoxalase I signature 1. | 30 | 51 | IPR018146 | GO:0004462(InterPro)|GO:0046872(InterPro) | |
Tan01g2667 | 185 | SUPERFAMILY | Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 18 | 173 | IPR029068 | - | |
Tan01g2667 | 185 | Pfam | Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily | 29 | 171 | IPR004360 | - | |
Tan01g2667 | 185 | Gene3D | - | 5 | 180 | IPR029068 | - | |
Tan01g2667 | 185 | PANTHER | LACTOYLGLUTATHIONE LYASE GLYOXALASE I | 3 | 179 | - | - | |
Tan01g2667 | 185 | NCBIfam | lactoylglutathione lyase | 28 | 175 | IPR004361 | GO:0004462(InterPro)|GO:0046872(InterPro) | |
Tan01g2667 | 185 | FunFam | Lactoylglutathione lyase | 1 | 181 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan01g2667 | Tan-Chr1:43722506 | Tan01g2669 | Tan-Chr1:43722506 | 3.30E-108 | dispersed | |
Tan01g2667 | Tan-Chr1:43722506 | Tan01g2668 | Tan-Chr1:43722506 | 3.30E-108 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan01g2667 | K01759 | - | csv:101220380 | 369.392 |