Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g2670 ATGGCTTCCTTGTCAATGGCCACCATTTTATCCCGTCTCTCTCTTTTGGGGTTTGCATCGAGATGTTCTTTAAACCGATTATTTATCCCCCCCAAAAGTAGTAGAATCGAGAGATTGAATCGATTGAGACCCTTCTCGATGGCTTCGGCTCCTAAAGAATCTCCGGCGAACAATCCGGGACTTCACGCTACCCCTGACGATGCCACTAAAGGTTACATCATGCAACAGACTATGTTTCGGATTAAGGATCCTAAAGCCAGTCTTGACTTCTATTCTCGAGTTCTGGGCATGTCACTACTCAAGAGACTGGATTTTCCTGAAATGAAGTTTAGCCTGTACTTTTTGGGTTATGAGGATCCTGCTTCTGCTCCAGACAGCTCGGTTGATAGAACAGTCTGGACTTTTGGTCGAAAGGCTACAATTGAGTTAACACACAACTGGGGTACTGAAAGTGACCCTGAATTTAAAGGATATCATAATGGGAACTCAGATCCTCGTGGCTTTGGACACATTGGTATAACTGTTGACGACACATTTAAGGCGTGTGAGAGATTTGAACGCCTAGGAGTGGAATTTGTTAAAAAACCAGATGATGGCAAAATGAAAGGAATTGCATTTATAAAGGATCCTGATGGCTACTGGATTGAAATCTTTGACCTCAAAACTATTGGAAAAATTACTACTGATGCTGCTTGA 696 42.67 MASLSMATILSRLSLLGFASRCSLNRLFIPPKSSRIERLNRLRPFSMASAPKESPANNPGLHATPDDATKGYIMQQTMFRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDPASAPDSSVDRTVWTFGRKATIELTHNWGTESDPEFKGYHNGNSDPRGFGHIGITVDDTFKACERFERLGVEFVKKPDDGKMKGIAFIKDPDGYWIEIFDLKTIGKITTDAA 231
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 43722506 43727417 + Tan0002705.4 Tan01g2670 740094
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g2670 231 ProSitePatterns Glyoxalase I signature 1. 76 97 IPR018146 GO:0004462(InterPro)|GO:0046872(InterPro)
Tan01g2670 231 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 64 219 IPR029068 -
Tan01g2670 231 ProSitePatterns Glyoxalase I signature 2. 161 177 IPR018146 GO:0004462(InterPro)|GO:0046872(InterPro)
Tan01g2670 231 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 73 220 IPR037523 -
Tan01g2670 231 CDD GlxI_Zn 74 218 - -
Tan01g2670 231 NCBIfam lactoylglutathione lyase 74 221 IPR004361 GO:0004462(InterPro)|GO:0046872(InterPro)
Tan01g2670 231 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 75 217 IPR004360 -
Tan01g2670 231 Gene3D - 48 226 IPR029068 -
Tan01g2670 231 PANTHER LACTOYLGLUTATHIONE LYASE GLYOXALASE I 41 225 - -
Tan01g2670 231 MobiDBLite consensus disorder prediction 48 67 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g2668 Tan-Chr1:43722506 Tan01g2670 Tan-Chr1:43722506 1.10E-132 dispersed
Tan01g2669 Tan-Chr1:43722506 Tan01g2670 Tan-Chr1:43722506 3.30E-108 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g2670 K01759 - mdm:103448063 377.096