Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g2894 ATGGCGGGGAAGCCCAACTCAGTTTCCTTCAGGGTTCCATACAGGAACCTCCAGGATGCAGAAGTGGAGATGGTGGCTGTTGATGAACAGCAGCTCCAAGGGATCGATCTCAATTCTCCTTCTTCTGATACATGTCCCAATGGCAACGCAGACAATTCGTCGTCAACGCCTCATGTTAGATCTACGCCCAATAGTTTGATTATCTTAATTCTCAGTTGTACTATCGCTGCTGGTGTTCAATTTGGTTGGGCATTACAGCTTTCCCTACTAACTCCCTATATTCAGACACTCGGAATTGAGCATGCATTTTCTTCGTTTATTTGGCTTTGCGGTCCCATCACTGGTCTCGTGGTTCAACCATGTGTCGGTATATGGAGTGATAAGTGTTCTTCAAAATATGGAAGGAGGCGTCCCTTTATTCTTGCTGGGTCTTTAATGATAGCAGTTGCTGTGGTGTTGATTGGATTTTCTGCTGACATTGGATATATCCTGGGAGATACGAAGGAACACTGCAGAATATATAAGGGTACACGAACGAGGGCGGCTATTATCTTTGTAGTAGGCTTTTGGATGCTTGATCTTGCAAACAATACGGTGCAGGGTCCTGCTCGTGCTCTTCTAGCTGATTTATCAGGTCCTGATCAACACAATGTTGCAAATGCGGTATTTTGTTCATGGATGGCTGTTGGTAATATCCTAGGTTTTTCAGCAGGAGCTAGTGGAAACTGGCACAAATGGTTTCCTTTCCTTTTGAGTGATGCTTGCTGTGAAGCCTGTGGAAACCTTAAAGCAGCATTTCTTGTTGCTGTGCTTTTTCTAACCATATGTACTCTTGTTACCTTATATTTTGCCGATGAAGTTCCACTTACTGCTGTAGATCAACCACCACGTTTATCAGATTCTGCTCCTTTGTTGAATGGGAATGAACAAAATAGTCCTAATATTTTAAAACCAGAACATAACAGTCTGACTGGGAGCAATGTTGACTATGGCTATCAAGAAAATATGGATTTGAAAAATTCAAAATCAAAAATTGAGGAAAACCACAGTGAAGGTTATTATGATGGTCCTGCAACAGTGGTAGTCAAATTGTTGTCGAGTTTAAGACATTTACCACCGGCCATGCATTCTGTGCTTCTTGTGATGGCTCTTAGCTGGTTATCCTGGTTTCCCTTCTTCTTATTCGATACGGATTGGATGGGAAGGGAAGTGTATCATGGGGACCCAAAAGGCAGTTTGACTGAAGAACAGGTTTATGATCAGGGTGTCAGGGAAGGTGCATTTGGTTTGCTATTGAATTCTGTTGTTCTTGGTATCAGTTCTTTCTTTATTGAGCCAATGTGTCAGCGTATGGGAGCAAGACTTGTCTGGGCAATGAGCAACTTTATTGTGTTTGCATGCATGTTGGGAACTACTATTATCAGTTTAATATCCGTCAGTCAATACTCTGAAGGAATTGAACATATTATTGGAGGAAATTCAACGATAAAAAATGCTGCCTTGGCTGTCTTTGCTCTTCTTGGTTTTCCTCTTGCTATAACATATAGCGTTCCCTTCTCTTTGACAGCAGAATTGACGGCTGATTCTGGTGGCGGGCAAGGATTGGCTATAGGAGTTCTCAATCTTGCAGTTGTCATCCCCCAGATGATTGTATCCCTGGGTGCTGGGCCATGGGATGCTTTATTCAGTGGAGGAAACATTCCTGCATTTGCTTTGGCTTCTATATGTGCGCTTGCGGCTGGAGTTGTTGCAGTTCTTAGGTTGCCTAATCACACCAACAGTTCTTTCAAATCCACAGGTTTCCATTTTGGTTAA 1815 42.75 MAGKPNSVSFRVPYRNLQDAEVEMVAVDEQQLQGIDLNSPSSDTCPNGNADNSSSTPHVRSTPNSLIILILSCTIAAGVQFGWALQLSLLTPYIQTLGIEHAFSSFIWLCGPITGLVVQPCVGIWSDKCSSKYGRRRPFILAGSLMIAVAVVLIGFSADIGYILGDTKEHCRIYKGTRTRAAIIFVVGFWMLDLANNTVQGPARALLADLSGPDQHNVANAVFCSWMAVGNILGFSAGASGNWHKWFPFLLSDACCEACGNLKAAFLVAVLFLTICTLVTLYFADEVPLTAVDQPPRLSDSAPLLNGNEQNSPNILKPEHNSLTGSNVDYGYQENMDLKNSKSKIEENHSEGYYDGPATVVVKLLSSLRHLPPAMHSVLLVMALSWLSWFPFFLFDTDWMGREVYHGDPKGSLTEEQVYDQGVREGAFGLLLNSVVLGISSFFIEPMCQRMGARLVWAMSNFIVFACMLGTTIISLISVSQYSEGIEHIIGGNSTIKNAALAVFALLGFPLAITYSVPFSLTAELTADSGGGQGLAIGVLNLAVVIPQMIVSLGAGPWDALFSGGNIPAFALASICALAAGVVAVLRLPNHTNSSFKSTGFHFG 604
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 63089181 63095109 + Tan0005492.1 Tan01g2894 740318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g2894 604 SUPERFAMILY MFS general substrate transporter 51 590 IPR036259 -
Tan01g2894 604 Gene3D MFS general substrate transporter like domains 62 588 IPR036259 -
Tan01g2894 604 CDD MFS_SLC45_SUC 69 586 - -
Tan01g2894 604 PANTHER SUGAR TRANSPORTER 65 586 - GO:0008506(PANTHER)|GO:0016020(PANTHER)
Tan01g2894 604 FunFam Sucrose transport protein SUT5 376 596 - -
Tan01g2894 604 MobiDBLite consensus disorder prediction 38 59 - -
Tan01g2894 604 Pfam Major Facilitator Superfamily 76 477 IPR011701 GO:0022857(InterPro)|GO:0055085(InterPro)
Tan01g2894 604 FunFam Sucrose transporter SUC2 67 291 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g2894 Tan-Chr1:63089181 Tan01g2896 Tan-Chr1:63089181 1.10E-266 dispersed
Tan01g2894 Tan-Chr1:63089181 Tan01g2895 Tan-Chr1:63089181 1.40E-301 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g2894 K15378 - csv:101205348 1100.89