Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g2895 ATGGCGGGGAAGCCCAACTCAGTTTCCTTCAGGGTTCCATACAGGAACCTCCAGGATGCAGAAGTGGAGATGGTGGCTGTTGATGAACAGCAGCTCCAAGGGATCGATCTCAATTCTCCTTCTTCTGATACATGTCCCAATGGCAACGCAGACAATTCGTCGTCAACGCCTCATGTTAGATCTACGCCCAATAGTTTGATTATCTTAATTCTCAGTTGTACTATCGCTGCTGGTGTTCAATTTGGTTGGGCATTACAGCTTTCCCTACTAACTCCCTATATTCAGACACTCGGAATTGAGCATGCATTTTCTTCGTTTATTTGGCTTTGCGGTCCCATCACTGGTCTCGTGGTTCAACCATGTGTCGGTATATGGAGTGATAAGTGTTCTTCAAAATATGGAAGGAGGCGTCCCTTTATTCTTGCTGGGTCTTTAATGATAGCAGTTGCTGTGGTGTTGATTGGATTTTCTGCTGACATTGGATATATCCTGGGAGATACGAAGGAACACTGCAGAATATATAAGGGTACACGAACGAGGGCGGCTATTATCTTTGTAGTAGGCTTTTGGATGCTTGATCTTGCAAACAATACGGTGCAGGGTCCTGCTCGTGCTCTTCTAGCTGATTTATCAGGTCCTGATCAACACAATGTTGCAAATGCGGTATTTTGTTCATGGATGGCTGTTGGTAATATCCTAGGTTTTTCAGCAGGAGCTAGTGGAAACTGGCACAAATGGTTTCCTTTCCTTTTGAGTGATGCTTGCTGTGAAGCCTGTGGAAACCTTAAAGCAGCATTTCTTGTTGCTGTGCTTTTTCTAACCATATGTACTCTTGTTACCTTATATTTTGCCGATGAAGTTCCACTTACTGCTGTAGATCAACCACCACGTTTATCAGATTCTGCTCCTTTGTTGAATGGGAATGAACAAAATAGTCCTAATATTTTAAAACCAGAACATAACAGTCTGACTGGGAGCAATGTTGACTATGGCTATCAAGAAAATATGGATTTGAAAAATTCAAAATCAAAAATTGAGGAAAACCACAGTGAAGGTTATTATGATGGTCCTGCAACAGTGGTAGTCAAATTGTTGTCGAGTTTAAGACATTTACCACCGGCCATGCATTCTGTGCTTCTTGTGATGGCTCTTAGCTGGTTATCCTGGTTTCCCTTCTTCTTATTCGATACGGATTGGATGGGAAGGGAAGTGTATCATGGGGACCCAAAAGGCAGTTTGACTGAAGAACAGGTTTATGATCAGGGTGTCAGGGAAGGTGCATTTGGTTTGCTATTGAATTCTGTTGTTCTTGGTATCAGTTCTTTCTTTATTGAGCCAATGTGTCAGCGTATGGGAGCAAGACTTGTCTGGGCAATGAGCAACTTTATTGTGTTTGCATGCATGTTGGGAACTACTATTATCAGTTTAATATCCGTCAGTCAATACTCTGAAGGAATTGAACATATTATTGGAGGAAATTCAACGATAAAAAATGCTGCCTTGGCTGTCTTTGCTCTTCTTGGTTTTCCTCTTGCTGTAAATGTCAAAGTCTCTTTTTAA 1560 41.86 MAGKPNSVSFRVPYRNLQDAEVEMVAVDEQQLQGIDLNSPSSDTCPNGNADNSSSTPHVRSTPNSLIILILSCTIAAGVQFGWALQLSLLTPYIQTLGIEHAFSSFIWLCGPITGLVVQPCVGIWSDKCSSKYGRRRPFILAGSLMIAVAVVLIGFSADIGYILGDTKEHCRIYKGTRTRAAIIFVVGFWMLDLANNTVQGPARALLADLSGPDQHNVANAVFCSWMAVGNILGFSAGASGNWHKWFPFLLSDACCEACGNLKAAFLVAVLFLTICTLVTLYFADEVPLTAVDQPPRLSDSAPLLNGNEQNSPNILKPEHNSLTGSNVDYGYQENMDLKNSKSKIEENHSEGYYDGPATVVVKLLSSLRHLPPAMHSVLLVMALSWLSWFPFFLFDTDWMGREVYHGDPKGSLTEEQVYDQGVREGAFGLLLNSVVLGISSFFIEPMCQRMGARLVWAMSNFIVFACMLGTTIISLISVSQYSEGIEHIIGGNSTIKNAALAVFALLGFPLAVNVKVSF 519
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 63089181 63095109 + Tan0005492.2 Tan01g2895 740319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g2895 519 Gene3D MFS general substrate transporter like domains 62 517 IPR036259 -
Tan01g2895 519 CDD MFS_SLC45_SUC 69 513 - -
Tan01g2895 519 SUPERFAMILY MFS general substrate transporter 68 475 IPR036259 -
Tan01g2895 519 MobiDBLite consensus disorder prediction 38 59 - -
Tan01g2895 519 PANTHER SUGAR TRANSPORTER 65 518 - GO:0008506(PANTHER)|GO:0016020(PANTHER)
Tan01g2895 519 Pfam Major Facilitator Superfamily 76 483 IPR011701 GO:0022857(InterPro)|GO:0055085(InterPro)
Tan01g2895 519 FunFam Sucrose transporter SUC2 67 291 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g2895 Tan-Chr1:63089181 Tan02g1470 Tan-Chr2:59008354 1.70E-93 dispersed
Tan01g2894 Tan-Chr1:63089181 Tan01g2895 Tan-Chr1:63089181 1.40E-301 tandem
Tan01g2895 Tan-Chr1:63089181 Tan01g2896 Tan-Chr1:63089181 4.30E-214 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g2895 K15378 - csv:101205348 948.732