Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g2896 ATGATAGCAGTTGCTGTGGTGTTGATTGGATTTTCTGCTGACATTGGATATATCCTGGGAGATACGAAGGAACACTGCAGAATATATAAGGGTACACGAACGAGGGCGGCTATTATCTTTGTAGTAGGCTTTTGGATGCTTGATCTTGCAAACAATACGGTGCAGGGTCCTGCTCGTGCTCTTCTAGCTGATTTATCAGGTCCTGATCAACACAATGTTGCAAATGCGGTATTTTGTTCATGGATGGCTGTTGGTAATATCCTAGGTTTTTCAGCAGGAGCTAGTGGAAACTGGCACAAATGGTTTCCTTTCCTTTTGAGTGATGCTTGCTGTGAAGCCTGTGGAAACCTTAAAGCAGCATTTCTTGTTGCTGTGCTTTTTCTAACCATATGTACTCTTGTTACCTTATATTTTGCCGATGAAGTTCCACTTACTGCTGTAGATCAACCACCACGTTTATCAGATTCTGCTCCTTTGTTGAATGGGAATGAACAAAATAGTCCTAATATTTTAAAACCAGAACATAACAGTCTGACTGGGAGCAATGTTGACTATGGCTATCAAGAAAATATGGATTTGAAAAATTCAAAATCAAAAATTGAGGAAAACCACAGTGAAGGTTATTATGATGGTCCTGCAACAGTGGTAGTCAAATTGTTGTCGAGTTTAAGACATTTACCACCGGCCATGCATTCTGTGCTTCTTGTGATGGCTCTTAGCTGGTTATCCTGGTTTCCCTTCTTCTTATTCGATACGGATTGGATGGGAAGGGAAGTGTATCATGGGGACCCAAAAGGCAGTTTGACTGAAGAACAGGTTTATGATCAGGGTGTCAGGGAAGGTGCATTTGGTTTGCTATTGAATTCTGTTGTTCTTGGTATCAGTTCTTTCTTTATTGAGCCAATGTGTCAGCGTATGGGAGCAAGACTTGTCTGGGCAATGAGCAACTTTATTGTGTTTGCATGCATGTTGGGAACTACTATTATCAGTTTAATATCCGTCAGTCAATACTCTGAAGGAATTGAACATATTATTGGAGGAAATTCAACGATAAAAAATGCTGCCTTGGCTGTCTTTGCTCTTCTTGGTTTTCCTCTTGCTATAACATATAGCGTTCCCTTCTCTTTGACAGCAGAATTGACGGCTGATTCTGGTGGCGGGCAAGGATTGGCTATAGGAGTTCTCAATCTTGCAGTTGTCATCCCCCAGATGATTGTATCCCTGGGTGCTGGGCCATGGGATGCTTTATTCAGTGGAGGAAACATTCCTGCATTTGCTTTGGCTTCTATATGTGCGCTTGCGGCTGGAGTTGTTGCAGTTCTTAGGTTGCCTAATCACACCAACAGTTCTTTCAAATCCACAGGTTTCCATTTTGGTTAA 1380 41.81 MIAVAVVLIGFSADIGYILGDTKEHCRIYKGTRTRAAIIFVVGFWMLDLANNTVQGPARALLADLSGPDQHNVANAVFCSWMAVGNILGFSAGASGNWHKWFPFLLSDACCEACGNLKAAFLVAVLFLTICTLVTLYFADEVPLTAVDQPPRLSDSAPLLNGNEQNSPNILKPEHNSLTGSNVDYGYQENMDLKNSKSKIEENHSEGYYDGPATVVVKLLSSLRHLPPAMHSVLLVMALSWLSWFPFFLFDTDWMGREVYHGDPKGSLTEEQVYDQGVREGAFGLLLNSVVLGISSFFIEPMCQRMGARLVWAMSNFIVFACMLGTTIISLISVSQYSEGIEHIIGGNSTIKNAALAVFALLGFPLAITYSVPFSLTAELTADSGGGQGLAIGVLNLAVVIPQMIVSLGAGPWDALFSGGNIPAFALASICALAAGVVAVLRLPNHTNSSFKSTGFHFG 459
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 63089181 63095109 + Tan0005492.3 Tan01g2896 740320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g2896 459 Gene3D MFS general substrate transporter like domains 1 443 IPR036259 -
Tan01g2896 459 PANTHER SUGAR TRANSPORTER 1 441 - GO:0008506(PANTHER)|GO:0016020(PANTHER)
Tan01g2896 459 SUPERFAMILY MFS general substrate transporter 36 446 IPR036259 -
Tan01g2896 459 CDD MFS_SLC45_SUC 1 441 - -
Tan01g2896 459 FunFam Sucrose transport protein SUT5 231 451 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g2894 Tan-Chr1:63089181 Tan01g2896 Tan-Chr1:63089181 1.10E-266 dispersed
Tan01g2896 Tan-Chr1:63089181 Tan02g2516 Tan-Chr2:93776094 1.20E-85 dispersed
Tan01g2895 Tan-Chr1:63089181 Tan01g2896 Tan-Chr1:63089181 4.30E-214 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g2896 K15378 - csv:101205348 846.654