Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g2955 ATGAATTGCTTTCAATGTTGCATGTCAGAAGAGAGATTCAATAAGAAATCTTTGAAAAAGAGCATTAAGGAGTATCATGAGACAAAAACTTTAGCCTCAATTGCCAACATTTCCTTCAATTCTGATAAAAATAAACGAAGGTACACGACTAAGGAGATAAAGAAGTTAGGAAAAGGGAGCATCTCAGCTCAAATTTTTACGTTTCGAGAGCTATGCGTCGCAACGAATAACTTCAACCACGAAAATCTATTGGGAGAAGGTGGTTTTGGAAGAGTTTACAAAGGCCTCATTAAAAGCACTAAACAAGTGGCTGTGAAGCAACTTGATCGAAATGGATTTCAAGGGAACAGAGAATTTCTTGTTGAGGTTTTGATGCTAAGCCTTCTTCACCACCCAAATCTTGTCAATTTGGTTGGGTATTCTATTGATACGAATCAAAGAATTTTGGTTTATGAGTACATGGCTAAGGGCTCTTTGGAGGATCATCTTCTTGATATAAATTCAGATAAGCCAACCCTAGATTGGAAGACAAGGATGAAAATCGTCGAAGGAGCAGCAAGAGGACTCGAATACTTGCACGAAACGAAACCTCCTGTGATATATCGCGACTTTAAAGCTTCAAACATATTGTTGGATGAAGAATTCAATCCAAAACTCTCAGATTTTGGTCTTGCAAAGTTAGGTCCCATTGGGGATAAATCTCATGTTTCCACTAGAGTGATGGGAACCTATGGTTATTGTGCTCCTGAATATGCACTTACAGGACAATTAACTACCAAATCTGATGTCTACAGTTTTGGTGTCATGCTTTTGGAGGCAATCACTGGAAGAAGAGTTATAGACAACACAAAACCAACAACAGAACAAAATTTAATTACTTGGGCAGAACCATTTTTCAAAGATAGAAGGAAATTCACACTAATAGCAGATCCAAAGCTAGAAGGAAATTACCCAGTGAAGGCTTTGTATCAAGCTTTGGCAGTGGTAGCCATGTGTTTACAAGAGGAAGCAAATACTCGACCATTGATTAGCGACGTGGTTATGGCTCTTCAATATTTAGGTGTAAACAAGGATGTCGATTTAGACATAGACGATGAATTAGATTCGGGGTTTGGATCGAGATTGAATTCAAGTTCAGGCTCAACTACTCCTGTTAGAAGTAGTGATAATGAAGATGAAAAGAGTGTTGATGTTGTAGGTGGTGGAAGGTGA 1212 38.37 MNCFQCCMSEERFNKKSLKKSIKEYHETKTLASIANISFNSDKNKRRYTTKEIKKLGKGSISAQIFTFRELCVATNNFNHENLLGEGGFGRVYKGLIKSTKQVAVKQLDRNGFQGNREFLVEVLMLSLLHHPNLVNLVGYSIDTNQRILVYEYMAKGSLEDHLLDINSDKPTLDWKTRMKIVEGAARGLEYLHETKPPVIYRDFKASNILLDEEFNPKLSDFGLAKLGPIGDKSHVSTRVMGTYGYCAPEYALTGQLTTKSDVYSFGVMLLEAITGRRVIDNTKPTTEQNLITWAEPFFKDRRKFTLIADPKLEGNYPVKALYQALAVVAMCLQEEANTRPLISDVVMALQYLGVNKDVDLDIDDELDSGFGSRLNSSSGSTTPVRSSDNEDEKSVDVVGGGR 403
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 68148626 68153282 - Tan0006667.1 Tan01g2955 740379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g2955 403 Pfam Protein kinase domain 79 347 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g2955 403 MobiDBLite consensus disorder prediction 370 403 - -
Tan01g2955 403 MobiDBLite consensus disorder prediction 371 386 - -
Tan01g2955 403 Gene3D Phosphorylase Kinase; domain 1 41 153 - -
Tan01g2955 403 PANTHER OS07G0668900 PROTEIN 31 366 - -
Tan01g2955 403 Gene3D Transferase(Phosphotransferase) domain 1 154 367 - -
Tan01g2955 403 ProSiteProfiles Protein kinase domain profile. 78 353 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g2955 403 MobiDBLite consensus disorder prediction 387 403 - -
Tan01g2955 403 CDD STKc_IRAK 84 347 - -
Tan01g2955 403 FunFam Serine/threonine-protein kinase PBS1 154 366 - -
Tan01g2955 403 ProSitePatterns Serine/Threonine protein kinases active-site signature. 199 211 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan01g2955 403 FunFam Serine/threonine-protein kinase CDL1-like 49 153 - -
Tan01g2955 403 SUPERFAMILY Protein kinase-like (PK-like) 59 353 IPR011009 -
Tan01g2955 403 ProSitePatterns Protein kinases ATP-binding region signature. 84 106 IPR017441 GO:0005524(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g1692 Tan-Chr1:17992777 Tan01g2955 Tan-Chr1:68148626 1.40E-183 dispersed
Tan01g2955 Tan-Chr1:68148626 Tan06g1468 Tan-Chr6:19782002 8.20E-128 dispersed
Tan01g2955 Tan-Chr1:68148626 Tan08g1943 Tan-Chr8:71591498 1.70E-120 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67069 PF00069 Pkinase 2.80E-46 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g2955 - - - 0.0