Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan01g2955 | ATGAATTGCTTTCAATGTTGCATGTCAGAAGAGAGATTCAATAAGAAATCTTTGAAAAAGAGCATTAAGGAGTATCATGAGACAAAAACTTTAGCCTCAATTGCCAACATTTCCTTCAATTCTGATAAAAATAAACGAAGGTACACGACTAAGGAGATAAAGAAGTTAGGAAAAGGGAGCATCTCAGCTCAAATTTTTACGTTTCGAGAGCTATGCGTCGCAACGAATAACTTCAACCACGAAAATCTATTGGGAGAAGGTGGTTTTGGAAGAGTTTACAAAGGCCTCATTAAAAGCACTAAACAAGTGGCTGTGAAGCAACTTGATCGAAATGGATTTCAAGGGAACAGAGAATTTCTTGTTGAGGTTTTGATGCTAAGCCTTCTTCACCACCCAAATCTTGTCAATTTGGTTGGGTATTCTATTGATACGAATCAAAGAATTTTGGTTTATGAGTACATGGCTAAGGGCTCTTTGGAGGATCATCTTCTTGATATAAATTCAGATAAGCCAACCCTAGATTGGAAGACAAGGATGAAAATCGTCGAAGGAGCAGCAAGAGGACTCGAATACTTGCACGAAACGAAACCTCCTGTGATATATCGCGACTTTAAAGCTTCAAACATATTGTTGGATGAAGAATTCAATCCAAAACTCTCAGATTTTGGTCTTGCAAAGTTAGGTCCCATTGGGGATAAATCTCATGTTTCCACTAGAGTGATGGGAACCTATGGTTATTGTGCTCCTGAATATGCACTTACAGGACAATTAACTACCAAATCTGATGTCTACAGTTTTGGTGTCATGCTTTTGGAGGCAATCACTGGAAGAAGAGTTATAGACAACACAAAACCAACAACAGAACAAAATTTAATTACTTGGGCAGAACCATTTTTCAAAGATAGAAGGAAATTCACACTAATAGCAGATCCAAAGCTAGAAGGAAATTACCCAGTGAAGGCTTTGTATCAAGCTTTGGCAGTGGTAGCCATGTGTTTACAAGAGGAAGCAAATACTCGACCATTGATTAGCGACGTGGTTATGGCTCTTCAATATTTAGGTGTAAACAAGGATGTCGATTTAGACATAGACGATGAATTAGATTCGGGGTTTGGATCGAGATTGAATTCAAGTTCAGGCTCAACTACTCCTGTTAGAAGTAGTGATAATGAAGATGAAAAGAGTGTTGATGTTGTAGGTGGTGGAAGGTGA | 1212 | 38.37 | MNCFQCCMSEERFNKKSLKKSIKEYHETKTLASIANISFNSDKNKRRYTTKEIKKLGKGSISAQIFTFRELCVATNNFNHENLLGEGGFGRVYKGLIKSTKQVAVKQLDRNGFQGNREFLVEVLMLSLLHHPNLVNLVGYSIDTNQRILVYEYMAKGSLEDHLLDINSDKPTLDWKTRMKIVEGAARGLEYLHETKPPVIYRDFKASNILLDEEFNPKLSDFGLAKLGPIGDKSHVSTRVMGTYGYCAPEYALTGQLTTKSDVYSFGVMLLEAITGRRVIDNTKPTTEQNLITWAEPFFKDRRKFTLIADPKLEGNYPVKALYQALAVVAMCLQEEANTRPLISDVVMALQYLGVNKDVDLDIDDELDSGFGSRLNSSSGSTTPVRSSDNEDEKSVDVVGGGR | 403 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 68148626 | 68153282 | - | Tan0006667.1 | Tan01g2955 | 740379 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan01g2955 | 403 | Pfam | Protein kinase domain | 79 | 347 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan01g2955 | 403 | MobiDBLite | consensus disorder prediction | 370 | 403 | - | - | |
Tan01g2955 | 403 | MobiDBLite | consensus disorder prediction | 371 | 386 | - | - | |
Tan01g2955 | 403 | Gene3D | Phosphorylase Kinase; domain 1 | 41 | 153 | - | - | |
Tan01g2955 | 403 | PANTHER | OS07G0668900 PROTEIN | 31 | 366 | - | - | |
Tan01g2955 | 403 | Gene3D | Transferase(Phosphotransferase) domain 1 | 154 | 367 | - | - | |
Tan01g2955 | 403 | ProSiteProfiles | Protein kinase domain profile. | 78 | 353 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan01g2955 | 403 | MobiDBLite | consensus disorder prediction | 387 | 403 | - | - | |
Tan01g2955 | 403 | CDD | STKc_IRAK | 84 | 347 | - | - | |
Tan01g2955 | 403 | FunFam | Serine/threonine-protein kinase PBS1 | 154 | 366 | - | - | |
Tan01g2955 | 403 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 199 | 211 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan01g2955 | 403 | FunFam | Serine/threonine-protein kinase CDL1-like | 49 | 153 | - | - | |
Tan01g2955 | 403 | SUPERFAMILY | Protein kinase-like (PK-like) | 59 | 353 | IPR011009 | - | |
Tan01g2955 | 403 | ProSitePatterns | Protein kinases ATP-binding region signature. | 84 | 106 | IPR017441 | GO:0005524(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan01g1692 | Tan-Chr1:17992777 | Tan01g2955 | Tan-Chr1:68148626 | 1.40E-183 | dispersed | |
Tan01g2955 | Tan-Chr1:68148626 | Tan06g1468 | Tan-Chr6:19782002 | 8.20E-128 | dispersed | |
Tan01g2955 | Tan-Chr1:68148626 | Tan08g1943 | Tan-Chr8:71591498 | 1.70E-120 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
67069 | PF00069 | Pkinase | 2.80E-46 | CL0016 | Tan | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan01g2955 | - | - | - | 0.0 |