Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan01g3003 | ATGATAAAGCAAGCGCATTCATTGTTTCAAATTCCCAACAAAATCCAATTCATTAGAAGCATTAGCAGACTCAGATTCTGTTCGTCGATCCTTCATTCCTCTGCCTTCCAAATCAAACCGCTGGGGAATCTCACTTCCACTCGTTCCCGCAACCACCATCGCCGGCCGCCCATGGCCACCGCCTCCGCCGCCGCCTCCGCCTCCGCGGCGGATAACCCTTCATCCACCTCTTCTTTCTCCTCCAACCCTTTCATTTTCTCCCCCGATTCTCCCCCTAGGCTCGCTCTCTCACCCCATCAGATTAAGCTTTGTTTCGAAGCACTTGGGGCCTTCAGGGAGAAGCTCCAGATGCCTAATATGATCAATCAGGAGTTTGCCCGATTACAGGCCACGAGAATAACTGGACTTGATATGAGGCGAAATTGCTCTGTGGCTCTTGACACTGTGAACATAAATAAAAATCGTTACACGGATGTAATACCCTTTGATGAGACTAGAGTTGTACTTGACTCATGTAAGGATTACAGACCTTCTGCAAGGGGTTATATAAATGCAAGCTTTATTTCGAGTTCCTCCTCAAAAAGCCTTTCTACGTTTATTGCCACACAAGGTCCACTACCACACACTTATGAGGATTTCTGGGAGATGGTATTTCAGTATAAATGCCCTGCAATCTTGATGCTTACTCGTCTTGTTGATAATTACAAGATGAAGTGTGGAGATTATTTTCAGGCTGAAGATGGTCCTAGAGATTTTGGTAATCTAGTTGTCGTCTCTAAATGGATAAGATCTTCCAACTCCTCTCTCATACTGCGTCATTTGGAGGTGAACCATAAAGAGTCAGAAGAGTCTGTGGCTGTTCTGCATATTCAGTACCCAGAATGGCCTGACCATGGAGTTCCTACTGACACACTTGCAGTTCGTGAAATGTTGAAGAGGTTGTATCATTTACCTCCTGATCTTGGCCCAATAGTGGTTCACTGCAGGTAG | 990 | 45.76 | MIKQAHSLFQIPNKIQFIRSISRLRFCSSILHSSAFQIKPLGNLTSTRSRNHHRRPPMATASAAASASAADNPSSTSSFSSNPFIFSPDSPPRLALSPHQIKLCFEALGAFREKLQMPNMINQEFARLQATRITGLDMRRNCSVALDTVNINKNRYTDVIPFDETRVVLDSCKDYRPSARGYINASFISSSSSKSLSTFIATQGPLPHTYEDFWEMVFQYKCPAILMLTRLVDNYKMKCGDYFQAEDGPRDFGNLVVVSKWIRSSNSSLILRHLEVNHKESEESVAVLHIQYPEWPDHGVPTDTLAVREMLKRLYHLPPDLGPIVVHCR | 329 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 73637286 | 73658328 | + | Tan0006000.2 | Tan01g3003 | 740427 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan01g3003 | 329 | Gene3D | Protein tyrosine phosphatase superfamily | 99 | 329 | IPR029021 | - | |
Tan01g3003 | 329 | PRINTS | Protein tyrosine phosphatase signature | 181 | 188 | IPR000242 | GO:0004725(InterPro)|GO:0006470(InterPro) | |
Tan01g3003 | 329 | PRINTS | Protein tyrosine phosphatase signature | 323 | 329 | IPR000242 | GO:0004725(InterPro)|GO:0006470(InterPro) | |
Tan01g3003 | 329 | PRINTS | Protein tyrosine phosphatase signature | 199 | 219 | IPR000242 | GO:0004725(InterPro)|GO:0006470(InterPro) | |
Tan01g3003 | 329 | PRINTS | Protein tyrosine phosphatase signature | 285 | 302 | IPR000242 | GO:0004725(InterPro)|GO:0006470(InterPro) | |
Tan01g3003 | 329 | SMART | PTPc_3 | 120 | 329 | IPR000242 | GO:0004725(InterPro)|GO:0006470(InterPro) | |
Tan01g3003 | 329 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 102 | 328 | IPR029021 | - | |
Tan01g3003 | 329 | PANTHER | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE | 51 | 328 | IPR050348 | GO:0004725(PANTHER) | |
Tan01g3003 | 329 | MobiDBLite | consensus disorder prediction | 45 | 78 | - | - | |
Tan01g3003 | 329 | Pfam | Protein-tyrosine phosphatase | 150 | 328 | IPR000242 | GO:0004725(InterPro)|GO:0006470(InterPro) | |
Tan01g3003 | 329 | ProSiteProfiles | PTP type protein phosphatase domain profile. | 121 | 329 | IPR000242 | GO:0004725(InterPro)|GO:0006470(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan01g3002 | Tan-Chr1:73637286 | Tan01g3003 | Tan-Chr1:73637286 | 4.50E-179 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan01g3003 | - | - | - | 0.0 |