Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g3083 ATGGCCTTCAGTACCGCAGCAGCGCAGCTCCACGTTTTCCGAACCTCCAATCTCCGATTCCCGGACTCCAACAAATCCTGGAATCGGACACGGCGAACTACACCGCCCGCCGTTATCCGCTGCGAGAAGGTGGTCGGAATCGACCTAGGAACGACGAACTCGGCGGTGGCGGCAATGGAGGGAGGGCAGCCGACGATCGTGACGAACGCCGAGGGACAGAGGACGACGCCGTCGGTGGTGGCGTACACGAGGACCGGCGATCGGCTTGTCGGTCAGTTGGCTAAACGGCAGGCGGTGGTTAATCCGGAGAACACTTTCTTCTCGGTGAAGAGGTTCATCGGAAGGAAGATGGCGGAGGTGGACGAGGAGGCCAAACAGGTCTCTTACAAGGTTGTCGCCGATGAGAATGGGAATGTGAAGCTCGATTGCCCTGCCGTTGGCAAGCAGTTCGCCGCCGAGGAGATCTCCGCTCAGGTATTGAGAAAGTTGGTGGATGATGCATCGAAGTTCTTGAATGATAGAGTAGGAAAAGCTGTAGTAACAGTACCAGCATATTTCAACGACTCACAAAGGACCGCGACAAAAGATGCCGGTCGCATTGCTGGTCTTGAAGTTCTTCGCATCATCAACGAACCAACCGCTGCTTCCCTTGCTTATGGCTTTGATAAGAAAACCAATGAAACCATTCTCGTTTTCGACCTTGGCGGTGGAACGTTCGATGTTTCAGTTCTTGAGGTTGGAGATGGCGTATTTGAGGTGCTTTCTACATCTGGTGACACGCATTTGGGTGGTGATGATTTTGACAAGAGGATTGTTGATTGGCTTGCTGAGAACTTTAAGAGGGACGAGGGAATCGATCTTCTGAAAGACAAACAAGCGCTGCAACGTCTAACGGAAACTGCTGAGAAGGCAAAGATTGAGCTTTCATCTTTGACACAGACCAATATTAGTTTGCCATTTATCACGGCGACCTCAGACGGTCCAAAACATATTGATACTACTCTTACTAGGGCCAAATTTGAAGAGCTGTGTTCAGACTTGCTAGATAGGCTGCGAATGCCGGTTGAAACGGCTCTGAAGGATGCAAAGTTGTCGTTCAAAGATATAGATGAAGTTATCCTCGTCGGGGGTTCGACTCGTATCCCAGCAGTTCAGGAGCTTGTCAAGAAAATCACAGGGAAAGAACCGAATATGACTGTAAATCCTGACGAAGTGGTTGCTCTTGGGGCTGCAGTTCAGGCTGGTGTTTTGGCTGGAGATGTCAGTGACATTGTTCTCTTGGATGTCACTCCTCTCTCTCTTGGGTTGGAAACTTTGGGTGGAGTAATGACCAAAATCATTCCGAGGAACACGACCCTACCGACATCCAAATCGGAGGTGTTTTCAACAGCATCAGATGGACAAACTAGTGTCGAAATTAACATATGTCAAGGTGAACGAGAGTTTGTTCGGGACAACAAGTCTCTCGGACGAATTCTCCTAGACGGTATCCCACCTGCACCCCGGGGTGTTCCTCAGATCGAAGTGAAATTTGACATTGATGCTAATGGTATTCTCTCTGTCACTGCCATTGACAAGGGAACTGGGAAGAAGCAGGACATCACAATTACAGGCGCTAGTACTTTACCAAGTGATGAGGTGGATAGAATGGTTAAAGAAGCAGAGAAGTTTGCAAAGGAAGACAAAGAGAAGAGGGATGCCATAGACACAAAGAACCAAGCAGATTCTACTGTGTACCAAACGGAAAAACAGCTCAAAGAGCTGGGAGACAAAATTCCCACTTCGGTTCGAGAGACCGTCGAGGCCAAGCTCAAAGACCTTAAGGACGCCATCTCTAACGGGTCGACTGAAACTATCAAAAACTCCATGGCTACACTGAATCAAGAAGTAATGCAGATGGGGCAGTACCTCTATAGCCAGGCTGCCTCCAGCGACGGGACTGCATCAGGAACTCAGTCAGCTTCATCGGGGTCAGCTGGCGAAACTGATGGCGATGTCGTCGATGCAGATTTTGTGGATAGCAAGTGA 2028 49.56 MAFSTAAAQLHVFRTSNLRFPDSNKSWNRTRRTTPPAVIRCEKVVGIDLGTTNSAVAAMEGGQPTIVTNAEGQRTTPSVVAYTRTGDRLVGQLAKRQAVVNPENTFFSVKRFIGRKMAEVDEEAKQVSYKVVADENGNVKLDCPAVGKQFAAEEISAQVLRKLVDDASKFLNDRVGKAVVTVPAYFNDSQRTATKDAGRIAGLEVLRIINEPTAASLAYGFDKKTNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLAENFKRDEGIDLLKDKQALQRLTETAEKAKIELSSLTQTNISLPFITATSDGPKHIDTTLTRAKFEELCSDLLDRLRMPVETALKDAKLSFKDIDEVILVGGSTRIPAVQELVKKITGKEPNMTVNPDEVVALGAAVQAGVLAGDVSDIVLLDVTPLSLGLETLGGVMTKIIPRNTTLPTSKSEVFSTASDGQTSVEINICQGEREFVRDNKSLGRILLDGIPPAPRGVPQIEVKFDIDANGILSVTAIDKGTGKKQDITITGASTLPSDEVDRMVKEAEKFAKEDKEKRDAIDTKNQADSTVYQTEKQLKELGDKIPTSVRETVEAKLKDLKDAISNGSTETIKNSMATLNQEVMQMGQYLYSQAASSDGTASGTQSASSGSAGETDGDVVDADFVDSK 675
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 79253125 79258674 - Tan0007698.1 Tan01g3083 740507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g3083 675 ProSitePatterns Heat shock hsp70 proteins family signature 1. 47 54 IPR018181 -
Tan01g3083 675 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 415 540 IPR029047 -
Tan01g3083 675 FunFam Chaperone protein DnaK HSP70 413 596 - -
Tan01g3083 675 Gene3D - 220 401 - -
Tan01g3083 675 FunFam Molecular chaperone DnaK 264 351 - -
Tan01g3083 675 ProSitePatterns Heat shock hsp70 proteins family signature 3. 372 386 IPR018181 -
Tan01g3083 675 ProSitePatterns Heat shock hsp70 proteins family signature 2. 231 244 IPR018181 -
Tan01g3083 675 Gene3D - 542 642 IPR029048 -
Tan01g3083 675 PANTHER HEAT SHOCK PROTEIN 70KDA 44 606 IPR013126 GO:0005524(InterPro)|GO:0009507(PANTHER)|GO:0140662(InterPro)
Tan01g3083 675 MobiDBLite consensus disorder prediction 641 675 - -
Tan01g3083 675 SUPERFAMILY Actin-like ATPase domain 43 223 IPR043129 -
Tan01g3083 675 FunFam Molecular chaperone DnaK 45 231 - -
Tan01g3083 675 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 419 575 IPR029047 -
Tan01g3083 675 FunFam Molecular chaperone DnaK 542 643 - -
Tan01g3083 675 Pfam Hsp70 protein 44 638 IPR013126 GO:0005524(InterPro)|GO:0140662(InterPro)
Tan01g3083 675 Coils Coil 287 314 - -
Tan01g3083 675 Gene3D - 45 414 - -
Tan01g3083 675 CDD HSPA9-Ssq1-like_NBD 41 417 - -
Tan01g3083 675 Hamap Chaperone protein DnaK [dnaK]. 41 674 IPR012725 GO:0005524(InterPro)|GO:0006457(InterPro)|GO:0051082(InterPro)
Tan01g3083 675 Gene3D Actin; Chain A, domain 4 264 351 - -
Tan01g3083 675 SUPERFAMILY Actin-like ATPase domain 226 417 IPR043129 -
Tan01g3083 675 PRINTS 70kDa heat shock protein signature 400 420 - -
Tan01g3083 675 PRINTS 70kDa heat shock protein signature 504 520 - -
Tan01g3083 675 PRINTS 70kDa heat shock protein signature 43 56 - -
Tan01g3083 675 PRINTS 70kDa heat shock protein signature 178 198 - -
Tan01g3083 675 PRINTS 70kDa heat shock protein signature 423 442 - -
Tan01g3083 675 PRINTS 70kDa heat shock protein signature 94 102 - -
Tan01g3083 675 PRINTS 70kDa heat shock protein signature 237 247 - -
Tan01g3083 675 PRINTS 70kDa heat shock protein signature 71 83 - -
Tan01g3083 675 PRINTS 70kDa heat shock protein signature 369 385 - -
Tan01g3083 675 MobiDBLite consensus disorder prediction 641 660 - -
Tan01g3083 675 NCBIfam molecular chaperone DnaK 43 638 IPR012725 GO:0005524(InterPro)|GO:0006457(InterPro)|GO:0051082(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g3083 Tan-Chr1:79253125 Tan11g2058 Tan-Chr11:43849648 1.70E-303 dispersed
Tan01g3083 Tan-Chr1:79253125 Tan11g0741 Tan-Chr11:6314563 3.20E-140 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g3083 K03283 - csv:101212307 1176.0