Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g3132 ATGGCATATACTTTGGAATCATGGACGAAGGAATATAATGAAGCTATGAAACTCTCTGAAGATATCAATAGCATGATTTCTGAGAGAAGTTCACTTGCTGCATCTGGACCTGAAGCTCAGCGTCATGCCTCGGCTATACGCAGGAAGATCACAATATTGGGTACCAGACTTGATACTTTGCAGACTCAGTTACCCAAGCTTCAAGGAAAGCAACCAATACCAGAGAAAGAGATGAATCGCCGCAGAGATATGATTGCAAATTTGAGATCAAAGGCTAACCAGATGGCTTCAACTTTGAACATGTCAAACTTCGCAAACCGTGATAGCTTACTTGGTCCAGAAATAAAGCCAGCGGATGTTGTGAACAGAACAGCAGGCTTGGACAACCAAGGGCTAGTTGGTTTTCAACGACAAATTATGAGAGAGCAAGATGAAGGCCTTGAGAAGCTGGAAGGAACCATAATTAGCACAAAACATATTGCATTGGCTGTCAATGAAGAACTTAACCTTCACACGAGACTTATTGATGATTTAGATGAACATGTTGATGTTACAGATTCACGATTACGGCGAGTGCAGAAGAGGCTGGCAATATTGAACAAGCGGACCAAGGGTGGTTGCACTTGCATGTCAATGATTTTATCAGTTGTTGGGATTGTCGTTCTTATTGCTGTCATATGGCTACTCATCAAGTATTTGTAA 702 41.74 MAYTLESWTKEYNEAMKLSEDINSMISERSSLAASGPEAQRHASAIRRKITILGTRLDTLQTQLPKLQGKQPIPEKEMNRRRDMIANLRSKANQMASTLNMSNFANRDSLLGPEIKPADVVNRTAGLDNQGLVGFQRQIMREQDEGLEKLEGTIISTKHIALAVNEELNLHTRLIDDLDEHVDVTDSRLRRVQKRLAILNKRTKGGCTCMSMILSVVGIVVLIAVIWLLIKYL 233
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 84200538 84202994 + Tan0020155.1 Tan01g3132 740556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g3132 233 CDD SNARE_Qc 140 197 - -
Tan01g3132 233 SUPERFAMILY SNARE fusion complex 128 199 - -
Tan01g3132 233 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 137 199 IPR000727 -
Tan01g3132 233 Pfam SNARE domain 174 224 IPR000727 -
Tan01g3132 233 FunFam syntaxin-51 isoform X2 139 201 - -
Tan01g3132 233 Gene3D - 139 201 - -
Tan01g3132 233 PANTHER SYNTAXIN 13 219 IPR045242 GO:0000149(PANTHER)|GO:0005484(PANTHER)|GO:0006886(PANTHER)|GO:0006906(PANTHER)|GO:0012505(PANTHER)|GO:0016021(PANTHER)|GO:0031201(PANTHER)|GO:0048278(PANTHER)
Tan01g3132 233 SMART tSNARE_6 132 199 IPR000727 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g1776 Tan-Chr1:19015234 Tan01g3132 Tan-Chr1:84200538 6.90E-95 dispersed
Tan01g1777 Tan-Chr1:19015234 Tan01g3132 Tan-Chr1:84200538 6.90E-95 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g3132 K08503 - csv:101208669 414.075