Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g3146 ATGAGTTGCTGGAAGAATTTTCCGGCAATGTGTTCTTCTCGCACTCTCCTTGTGCTGATTCCTCTGCTTCTTCACACGTTCGTGGCTCTGGTCTCTGCTCAGGGATCTAATAATACCTCTCCATGGCAGACTCTGAGTGGAGATGCTCCATTTGTTGTGGCTCGCGGTGGATTTTCAGGGCTGTTTCCTGATTCGAGTGGATTTGCCTACAATTTTGCACTTGAGGCTAGTGTTCCTGATGTGATCTTGTGGTGCGATGTGCAATTAACTAAAGATGAAGCTGGAATTTGTCTCCCGGATCTGACGTTCGACAATGCCACTGACGCTCTTGACCTTCTTGGGGCAAACCGCAGCCGTGTCTATCTTGTTAATGGAGTTCGTACTAAGGGATTGTTTACAGTCGATTTCAATTTGGGAGATCTGGCAAATGTTACTCTTACTCAAGGTACCTATTCTCGATCTAACAAGTTTGATGGCAATGGTTTTGTTATCCTCACACCTGAAGATGTGGCCATGCAGTTCAAGCCACCAGGATTTTGGCTGAATATTCAGCATGATGCATTCTACACTCAACAAAACTTGAGCATGAGGAACTTTGTACTTTCTGTAACCAGACGCATCGTTGTTAACTATATATCATCACCAGAGGTGGGATTTCTTAGAAGTATAGCTTCAAGAATTAATCCCCGCACAACAAAGTTGATTCTTCGGGTTTTAGGACCAGCTGATATTGAGGTTACCACCAATCAGACATATGACACTCTTTTACGCAATCTCACCTTTATCAAGACATTTGCTTCTGGAATTCTTGTTCCTAAGACTTATATATCGCCCATTGATAGTGATGGTTACATACAACCTGAAACCTCTCTTGTTTCTGAAGCTCATAAAGCAAAGCTGGAAGTTTTTGCGTCAGAGTTCTATAGTGACCTTCCACTAAGCTACAACTACAGTTATGATCCCATTACTGAATACCTGTCTTACTTTGACAATGGTAAATTTTCAGTTGATGGTGTGCTCACTGATTTCCCTATTAGTCCATCGGCAGCTATTGATTGTTTTGCTCATTTGGATGAAAAGAAGCCAAAAAGTCAAGGCAAGCCTTTGGTTATTTCCAAATTTGGAGCTAGTGGAGACTTTCCTGCTTGCACAGACTTGGCGTATTCCAAGGCTATTTCAGATGGTGTAGAAGTGCTCGACTGTCCTGTTCAAATATCCAAAGATGGAACACCATTTTGCATGAGCTCAATCAATCTTATAGATAGCACAACCATATCTCAAACATCATTCACTACTCGTTCAAAAAAAATTCCTGCAATTGGTCCTAATGACGGAATCTTTGCTTTTGACTTAACGTGGGAAGAGATTCAAGGCCTAACCCCGTCAATATTGAACCCTTTTTCGAAGTACACATTGTTCCGAAACCCAAGGTTCCGAAACAGTGGGAAATTCTTAACGCTACCTGATTTCTTGGCCTTGGCGAAGAATGCAAGCTCTCTTTCTGGTGTCTTGATCCATATTGAGAATGCAGCCTACCTTGCTAAGGAACAGGGTTTAAGTGTAACTGATGCGGTCTTTGATTCCTTGAGCAAAGCTGGTTATGATAATCAGACAGCCCTGAAAGTATTGATTCAGTCTCCAAATAGCCCTGTTCTAATAAAATTTAAAGAGGAAAAGAAAAATTACGAGCTTGTTTATGAAGTTGATGAGTCAATTAGTGATGTCCTTAATGGAACTGTCGTGGACATCAAGAGTTTTGCCGACTCTGTGACTATCAGCAAGACCTCTGTCTTTCCTGTAAATCAGCTATTTCTCACTGGAGCTACAGATGTTGTGAAGAAGCTGCAATCACTTAATCTCTCTGTATATGTGGAGACCTTCAGCAATGAATTTGTATCTCAAGCATGGGATTTTTTCTCAGATGCAACAATAGAGATCAACTCATATGTTATGGGAGCCGAGATTGATGGAGTCATCACCGACTTTCCGAAGACATCTGCTAGATATAAAAAGAACCGATGTTCAACAATGAAACAACCACCTAATTACATGAGTCCTGTCCAGCCTGGTAGCTTGTTGCAACTTGTTACAGATGATTACTTGCCTCCAAAGGTACCTGCGAGCCCGATTCTGGATGACAAAGACGTAGCCGAGCCACCGTTGCCTCCGGTCTCGAGCAAAGCCCCAGCACCTGCTGGGGAAGGTGGCTCTTCAGCATCACCTCTATCTCCTCCTCCACCCAATGGTCAACCTAAGCTTGGGGCTGGGGCAGGCTTCTTGCTCTTGAACCTTGCCATAGTTTTCATTGCTCTTCTTCCACTCTGA 2325 42.92 MSCWKNFPAMCSSRTLLVLIPLLLHTFVALVSAQGSNNTSPWQTLSGDAPFVVARGGFSGLFPDSSGFAYNFALEASVPDVILWCDVQLTKDEAGICLPDLTFDNATDALDLLGANRSRVYLVNGVRTKGLFTVDFNLGDLANVTLTQGTYSRSNKFDGNGFVILTPEDVAMQFKPPGFWLNIQHDAFYTQQNLSMRNFVLSVTRRIVVNYISSPEVGFLRSIASRINPRTTKLILRVLGPADIEVTTNQTYDTLLRNLTFIKTFASGILVPKTYISPIDSDGYIQPETSLVSEAHKAKLEVFASEFYSDLPLSYNYSYDPITEYLSYFDNGKFSVDGVLTDFPISPSAAIDCFAHLDEKKPKSQGKPLVISKFGASGDFPACTDLAYSKAISDGVEVLDCPVQISKDGTPFCMSSINLIDSTTISQTSFTTRSKKIPAIGPNDGIFAFDLTWEEIQGLTPSILNPFSKYTLFRNPRFRNSGKFLTLPDFLALAKNASSLSGVLIHIENAAYLAKEQGLSVTDAVFDSLSKAGYDNQTALKVLIQSPNSPVLIKFKEEKKNYELVYEVDESISDVLNGTVVDIKSFADSVTISKTSVFPVNQLFLTGATDVVKKLQSLNLSVYVETFSNEFVSQAWDFFSDATIEINSYVMGAEIDGVITDFPKTSARYKKNRCSTMKQPPNYMSPVQPGSLLQLVTDDYLPPKVPASPILDDKDVAEPPLPPVSSKAPAPAGEGGSSASPLSPPPPNGQPKLGAGAGFLLLNLAIVFIALLPL 774
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 84994266 85004525 + Tan0007690.1 Tan01g3146 740570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g3146 774 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 16 734 - GO:0008889(PANTHER)
Tan01g3146 774 Pfam Glycerophosphoryl diester phosphodiesterase family 375 665 IPR030395 GO:0006629(InterPro)|GO:0008081(InterPro)
Tan01g3146 774 CDD GDPD_SHV3_repeat_2 368 669 - -
Tan01g3146 774 FunFam Glycerophosphodiester phosphodiesterase GDPDL3 366 670 - -
Tan01g3146 774 SUPERFAMILY PLC-like phosphodiesterases 367 669 IPR017946 GO:0006629(InterPro)|GO:0008081(InterPro)
Tan01g3146 774 SUPERFAMILY PLC-like phosphodiesterases 49 345 IPR017946 GO:0006629(InterPro)|GO:0008081(InterPro)
Tan01g3146 774 ProSiteProfiles GP-PDE domain profile. 368 670 IPR030395 GO:0006629(InterPro)|GO:0008081(InterPro)
Tan01g3146 774 MobiDBLite consensus disorder prediction 707 750 - -
Tan01g3146 774 Gene3D Phosphatidylinositol (PI) phosphodiesterase 366 669 IPR017946 GO:0006629(InterPro)|GO:0008081(InterPro)
Tan01g3146 774 Gene3D Phosphatidylinositol (PI) phosphodiesterase 49 347 IPR017946 GO:0006629(InterPro)|GO:0008081(InterPro)
Tan01g3146 774 FunFam Glycerophosphodiester phosphodiesterase GDPDL3 48 350 - -
Tan01g3146 774 CDD GDPD_SHV3_repeat_1 50 350 - -
Tan01g3146 774 ProSiteProfiles GP-PDE domain profile. 50 351 IPR030395 GO:0006629(InterPro)|GO:0008081(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g3146 Tan-Chr1:84994266 Tan03g1952 Tan-Chr3:74663266 1.40E-152 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g3146 - - - 0.0