Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g3147 ATGCCGGAGAAAGAGAGTCAATGTGTGGTTACACAGCCTCGTCTTGTGGCTAGAAAGTTTCTAGCTAGGCCTCAGCATGAAGGGTTGGGTGCCATTGTTAGAAGGAGCATTGGAAGGTTTGAGCTGAAACACTTTGACCCTTTTCTGGTTTTGGATGAATTTTCAGTTACTGCCCCAGCTGGGTTCCCTGATCATCCACATAGAGGATTTGAGACAGTGACCTACATGTTACAGGGAAGTGTGACACATGAAGATTTTGAAGGCCACAAGGGAACAATTGGTGCAGGTGACTTGCAGTGGATGACTGCAGGTAGAGGAATTGTACATTCAGAAATGCCTGCAGCTCAAGGAACCCAAAAGGGCCTCCAACTATGGATCAACCTCTCTTCCAAGAATAAAATGATTGAGCCAAATTACCAAGAAGTTTCAAGCAAGGAAATCCCAGAAGCTACAAAAGATGAAGTGAGAGTGAAAGTCATAGCTGGTGAAGCATTGGGAGCAAAATCACCCATCTACACAAGAACTCCAACCATGTACTTGGATTTCACTCTCAAGCCAAAAGCTCATCTCCAACAGCCAATCCCCTCGTCCTGGAACGCATTCGTTTACGTTCTTGAAGGCGAAGGCGTCTTCGGCAGTTCAAAGGCAACGTCGACGACAGCGCATAACCTTCTTCTGCTCGGGTTCGGGGATGGTTTAGAGGTCTGGAATAAGTCAGCCAAGCCTCTAAGGTTCATTTTGGTAGGAGGTGAACCATTGAGTGAGCCTATTGTGCAATTTGGGCCATTTGTGATGAACACTCAAGAAGAAATTGACCAAACAATTGATGATTTTGATAACTATACCAATGGGTTTGAGAAAGCAAGGCATTGGAGATCAGAAGCTGCAATTTCACTTGGGTTCTAA 906 45.25 MPEKESQCVVTQPRLVARKFLARPQHEGLGAIVRRSIGRFELKHFDPFLVLDEFSVTAPAGFPDHPHRGFETVTYMLQGSVTHEDFEGHKGTIGAGDLQWMTAGRGIVHSEMPAAQGTQKGLQLWINLSSKNKMIEPNYQEVSSKEIPEATKDEVRVKVIAGEALGAKSPIYTRTPTMYLDFTLKPKAHLQQPIPSSWNAFVYVLEGEGVFGSSKATSTTAHNLLLLGFGDGLEVWNKSAKPLRFILVGGEPLSEPIVQFGPFVMNTQEEIDQTIDDFDNYTNGFEKARHWRSEAAISLGF 301
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 85019506 85023197 + Tan0006231.1 Tan01g3147 740571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g3147 301 PIRSF Pirin 12 292 IPR012093 -
Tan01g3147 301 FunFam pirin 27 165 - -
Tan01g3147 301 Pfam Pirin C-terminal cupin domain 179 283 IPR008778 -
Tan01g3147 301 PANTHER PIRIN-RELATED 10 294 IPR012093 -
Tan01g3147 301 Gene3D Jelly Rolls 148 253 IPR014710 -
Tan01g3147 301 CDD cupin_pirin_C 176 252 - -
Tan01g3147 301 Gene3D Jelly Rolls 27 279 IPR014710 -
Tan01g3147 301 Pfam Pirin 33 126 IPR003829 -
Tan01g3147 301 SUPERFAMILY RmlC-like cupins 14 293 IPR011051 -
Tan01g3147 301 CDD cupin_pirin_N 31 128 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g1795 Tan-Chr1:19208511 Tan01g3147 Tan-Chr1:85019506 2.40E-132 dispersed
Tan01g1796 Tan-Chr1:19208511 Tan01g3147 Tan-Chr1:85019506 2.20E-130 dispersed
Tan01g1797 Tan-Chr1:19210210 Tan01g3147 Tan-Chr1:85019506 1.00E-92 dispersed
Tan01g3147 Tan-Chr1:85019506 Tan10g1221 Tan-Chr10:12783034 5.20E-119 dispersed
Tan01g3147 Tan-Chr1:85019506 Tan01g3148 Tan-Chr1:85019506 1.70E-154 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g3147 K06911 - csv:101216351 578.17