Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g3148 ATGGGTTTCTCTCTGTTTCTTGTTTTCTTTGATCCCATGAATGTACCGTTTGAATTAGTTAGTGGAGGTGAGAGGAAGAACGAAGAACTTGATGGGCTTAGAAAATTTTCTAGTTTTTTATCCTCAGAATGTAGCATTGTAAGTGGAGAGGATCCTTCTTGGCTTATGGTTTGGTTCAATACTCTAATGGTGTTTTTCGACAGGTTTGAGCTGAAACACTTTGACCCTTTTCTGGTTTTGGATGAATTTTCAGTTACTGCCCCAGCTGGGTTCCCTGATCATCCACATAGAGGATTTGAGACAGTGACCTACATGTTACAGGGAAGTGTGACACATGAAGATTTTGAAGGCCACAAGGGAACAATTGGTGCAGGTGACTTGCAGTGGATGACTGCAGGTAGAGGAATTGTACATTCAGAAATGCCTGCAGCTCAAGGAACCCAAAAGGGCCTCCAACTATGGATCAACCTCTCTTCCAAGAATAAAATGATTGAGCCAAATTACCAAGAAGTTTCAAGCAAGGAAATCCCAGAAGCTACAAAAGATGAAGTGAGAGTGAAAGTCATAGCTGGTGAAGCATTGGGAGCAAAATCACCCATCTACACAAGAACTCCAACCATGTACTTGGATTTCACTCTCAAGCCAAAAGCTCATCTCCAACAGCCAATCCCCTCGTCCTGGAACGCATTCGTTTACGTTCTTGAAGGCGAAGGCGTCTTCGGCAGTTCAAAGGCAACGTCGACGACAGCGCATAACCTTCTTCTGCTCGGGTTCGGGGATGGTTTAGAGGTCTGGAATAAGTCAGCCAAGCCTCTAAGGTTCATTTTGGTAGGAGGTGAACCATTGAGTGAGCCTATTGTGCAATTTGGGCCATTTGTGATGAACACTCAAGAAGAAATTGACCAAACAATTGATGATTTTGATAACTATACCAATGGGTTTGAGAAAGCAAGGCATTGGAGATCAGAAGCTGCAATTTCACTTGGGTTCTAA 993 43.3 MGFSLFLVFFDPMNVPFELVSGGERKNEELDGLRKFSSFLSSECSIVSGEDPSWLMVWFNTLMVFFDRFELKHFDPFLVLDEFSVTAPAGFPDHPHRGFETVTYMLQGSVTHEDFEGHKGTIGAGDLQWMTAGRGIVHSEMPAAQGTQKGLQLWINLSSKNKMIEPNYQEVSSKEIPEATKDEVRVKVIAGEALGAKSPIYTRTPTMYLDFTLKPKAHLQQPIPSSWNAFVYVLEGEGVFGSSKATSTTAHNLLLLGFGDGLEVWNKSAKPLRFILVGGEPLSEPIVQFGPFVMNTQEEIDQTIDDFDNYTNGFEKARHWRSEAAISLGF 330
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 85019506 85023197 + Tan0006231.2 Tan01g3148 740572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g3148 330 CDD cupin_pirin_C 205 281 - -
Tan01g3148 330 PANTHER PIRIN-RELATED 68 323 IPR012093 -
Tan01g3148 330 SUPERFAMILY RmlC-like cupins 64 322 IPR011051 -
Tan01g3148 330 Gene3D Jelly Rolls 66 308 IPR014710 -
Tan01g3148 330 CDD cupin_pirin_N 70 157 - -
Tan01g3148 330 Pfam Pirin 70 155 IPR003829 -
Tan01g3148 330 Gene3D Jelly Rolls 177 282 IPR014710 -
Tan01g3148 330 Pfam Pirin C-terminal cupin domain 208 312 IPR008778 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g3148 Tan-Chr1:85019506 Tan10g1221 Tan-Chr10:12783034 4.10E-109 dispersed
Tan01g3147 Tan-Chr1:85019506 Tan01g3148 Tan-Chr1:85019506 1.70E-154 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g3148 K06911 - csv:101216351 518.464