Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g3197 ATGGCGGCGATGGAGAAGCTGTTCGTGCAGATCTTCGAGAGAAAGAAGTGGATCATTGACCAGGCCAAGCACCAGACCAATCTCTTCGACCAACACCTCGCGTCCAAGCTCATTATCGATGGAATTGTTCCTCCACCTTGGCTCCACTCGTCTTTTCTTCCTTCCCACATTTCGCATTTTGAAGAAGTGAACAAGAATTTTATTTCTGGAGTTGAGTTCCCGCGCTCGCCGCTTGAGACCCATCGTTCTTGTTTGAACGAGGGATTGGTTGGTAGGGAGGAGTTGCAGCACAGGTCGAATGAAGAAGCTGGTTCTTTAAACGATGGTTTTGATGTAGGAATTAGGCCATCTGTTTTACCCCAGTGCGACACAAGTGATGCTGGATTTGCCTTAAATTGCGCCCCTCATATTGAGATGAGTCCCTTTTCTCCTCAAGGTCGAGAAGGCGGAGTCTCAGAAACTTATCAAGATCCTACCCTGTCATTGGCACGGTTACACAGATCTAAATCTAGGCAAAGGGCTTTAGAGTTGCGTAATAGTGTTAAATCAGCTAGGTTCCAATCCCGGTGTGAGAACAAGAATGATTCGATTGCTGGTGGGATCATGGGATCTGCTATTAGTCTGCTGCGAGCTGATCACGAAGATGCATCAGAGTTGGCAAAGCCTTCTAGTAGCTGTAAGGGATTTGTTTCTGCAGAAGAAGAAACTAATGTTTGTTGCGAGCAGAAGGATATCTCTGTTTGCTCTGATAAAATTACAATAGTTGGAAGCCCTGGGTTGCAAAGTAGCTCTATTAATGTGGGTACTTCTTTAAACAGTTCCTCTAAAGATGAAGGGTTATGTGTAGCTGGAGGCTCAACGCAGAATTCTTGTCAAGTGAAAGGGCAATTTGACTCGCCTAGACCTTCTTCTAGAAAGATTGAAGACTGTGAAGAAGGGTCGGGATATTGCAGGAGCCAGGAATATAATTTTGATAATGCCGAATGGTCTAGGTTGCAATGTAGCTCTTTGGATGTGGATAGAACTTCATGCATTTCCCCTGAAGATGGAAGAGCATGTCCTGGAAGCTCAAAATTGCAATCTGATCAAGCGGTTCAGCAATTGGACTTACCTAAACCTTCTTCTGGCAATATTGAGTGCCGTGAAGAGACAGTATTAGAACATTGCAGGAGCCAGGAATGTAATCTTGATAATGCTCTACAGTCTGGGTCACAATATAGCTCCCTGGATGTGGACGATTCATTATGCATTGACACTGGCACTGGAAGATTATTGGACTTGTCTAAACCTTCTTCTGGCAACGTCGAATGCTGTGAAGAAACTATTTTAGGACATTGCAGGAGCCAGGAATGTAATCTTGATATTGCCCAACAGTCTGGGTCGCAGTGCAGCTCCCAGGATGTTGATAATTCTTCATATGTTGACTCTGAGGACGGAAGATCATGTCCCATTGGAAGTTCAACAGTGCTTTGTGATCAGGTGAAAGAGCAAGTGGACTTATCTAAATCTTCTTCTGACAATATGGAGTGCCGTGAAGAAGAAATATTAGGACATTTCAAGAGTCAGGAGCATCAATTTAACAATGCTCGACAGTCTGGGATGCAACATAGCTCCCTGGATGCAGATAATTCTCCATGCCTTTCCTCTGAAGATGGAACTTTATGTCACGTTGTAAGTTCAAAACGACGTTCTGATCAGGTGAATGAGCTGTTGGAGTTGTCTAGACCTTCTTTGGTCAATATTGAATGCCACAAAGAAGGCCTAGGAGACTGTAGGACCCAGGACAAGAATTTTGGTAATAATGCAGAACAGTCTGGTTTAGACAAAATTTCCAGTTCACCAATGATGGAAGTAAGGGAGAAAACATCAGATAAGAAGCCCTCCACTTTTCTGGATGACAAGAGGGCTGTTAATGAAAAAGAAAAATGCAATTCACCCCTTCCCATGCCTTTGCCACAGATGCAGTTAGACTCAGTAAAGGAAGATGAATCTTATAAAGATGCATCTGAATCTCATAGTGAGAAGAGATATGAAGACAGAGGATATTTAAACGTGAATTCTCTCTCGTCTGCTGACAAATCACTGCATGGTTATGAAAAAATAACTGCTTGTTCTTTGCTGCAAAGTGATGAACCTGCTGAACAAAATATTTCTTTGAAAGATGGAGTATCAAATGTGCGGGTTTTCCATGAAAATGTAGTTGAAATTCCACCAGTGGATACAGACGAAGCATCAGTTTTGGTAAGAGACACAGAAACGTTTAGAGATCTCATGGTTATGGCTCCTTGTGTTCCTTCCGCTGGTGAAAGGGATAGTAATTTGAAGCAGCAACTAAAAAATTCAGGCATATCTCAGTGTGAAGATTCAGATTCCTTTGAGGGCTGCACTGGGGGCTTTAATGGTAACCATCATTACATATCAACGGAGTGCCAGACTGCAGAAAGATTAATAGAGTTAAAAACTTTCTGCTCAGTTTTGAAGGCATCTAGTTCTCATGAAAAGCAGAGATTGGTTGAGCTGCAATTGGAGAATGGTATTCCTGCATCTTTAGGTTTGAGGAATGAGAAACTTCATATTATCAACAGGAGTCCCCTAGATCAGAAATTGATGCAGGAATTTGACTATGAAAAACCCATCCTTGAATTTCAGCGATTGTCATTCTGTGAAGAAGATTATCCACAACCAAATGTGAACATCAGCCCTGAAGAAATGTTGCTTTTGGAAAAGGAAGCTCACTTAATGCAGGGGTCTGAAATTTCACCCAAGCTTACAGTCAAAGAGGATCTCTCTAGGTTCGGGAGCTATACCAGAGGCACAACATTGCAAAATGTTATGCTAGAAAGCCAAAGTGGGGATACTAAAGAAAATCTTCGATTTGGAGGTAATGAACTTCATGTTGATACTCAGAAAACTGAAGGAGAAGAGGAAAATGGAAAACTTACTTCTTGCTCGCTCATTACTCGCCATATCCAAACTCCTCATTATCTTGGTGTAGATAAGGATACGCCTGCATTAGAGGGGTTCCTAATGCAGGCTGATGATGACCAACCATGCATTTCTGTTGGTGGAATCAACAGAAAGCATCTTGGAGAACATGCAAGCATTAGTGATCTAATGGAGAGCATGGACTCAGCAACACAGGGACTCATCAACTTTGACAAATTAGATCTTTCAAAGTGTATGATAGAACGTGCAAGCATCTTGGAGAAACTTTGTAAATCTGCTTGTACAAACAGCCCATTATCCTCATCTTCAGAAAGTTTTAAGTTGAACAAGGTGTCAGATTTGTACCATTCTCTTCCTAATGGTCTAATGGAGAGCATGGACTTGAAGAGTAACCTTCTGATGAATGATCAGAATAAGCTACTAAAGGATGGTAGTAACTTCTTGAATAGAGAAGTCAACTGCTCTCCTCATGGGAAGTCTTTTTCTGATTGCCTGCAAAGCTTTAGCAGTAATTCAGCTGGCGATGTCAGGAAGCCATTTGCATCTCCATTTGGTAAGTTGTTGGATAGAAATTCATTAAATTCTTCCAGTTCTGGAAAACGAAGCAACCAGAACATAGAGCTTCCTTGCATTAGTGAAGAAGCCGAAAATACAGATGAGGTTGATGATGAATTTTCAAAAGATATGGGATCTAAAGAGCGAGTACCACTTGCTGACATTACAGAAAATGACAACGTTCAGGTAACAGTTTCTGAAGCCGCGACATTTGCTGATAGATTGAGTTTAGAATCTTTAAACACAGAACTCAGCAACACAGGGACTCATACTAGAACCAAAGAGAATCTGGGAAATCAGAAAAGCAGTAAGAGGAAATATTTGAATGAAGCCGTGAATCATGATATCTTGCCAGGAGCAAACGGAGCTAAGAGAGTCACCAGATCATCTTATAATAGATTTAGCAGGTCAGATTTATCCTGTAAAGAAAATTCCAGAAAGGAAGGCCCTCGATTCTCTGAAAAGGAATCCAAGCATAAAAATATCGTGTCCAATGTGACTTCTTTTATTCCTCTTCTCCAACAAAGAGAAGCTCCAACTATTTTAAAAGGGAAGAGAGATATTAAGGTGAAGGCCATTGAGGCTGCTGAGGCAGCAAAACGCCTTGCAGAAAAGAAAGAAAATGAACGTCAAATGAAGAAAGAAGCCTTGAAACTTGAAAGAGCAAGAATGGAGCAAGAGAATTTGAGGCAGATTGAATTGGAGAAAAAGAAGAAAGACGAAGAGCGGAAGAAGAAAGAGGAAGAAAGGAAGAAAAAAGAGGCTGATATGGCAGCAAAGAAAAGACAGAGGGAAGAAGAAGAGAGAAAGGAGAAAGAAAGAAAAAGAATGCGTGTTGAAGAAGTTAGGAGACGCTTACGAGAACATGGCGGGAAATTAAGATCTGATAAAGAGAATAAGGAAGTGAAACCCCAAGCCAATGACCAAAAACCACGTGACAGAAAGGGATGTAAGGATGTGACTGACAAACTGGACAAGGAAAGTGGACATGGCAACTTTGACAAACTGTCTGTTAATGAGTCCAAGACTACGACAAGCGATGCTGGAAGGGCAAGCTCGGTTGTGGAGGACTCGCAAACAAGTGTTGGTTCTCTAGAGGCAGAGGCATTTGAAAATGTGATGGAAAATAGAATCTCCGAAACAAGTGAAGAACAATCATATCAGATTTCTCCTTATAAAGCATCTGATGATGAAGATGAAGAGGATGATGATGGCGATGACGACATACAAAACAATAAATTTGTTCCTTCATGGGCCAGTAAGGATCGCTTAGCTGTCCTTTTTGCTTCCCAGCAAAAATTGAATCCAGAAATTATCTTTCCACCAAAAAGTTTTTGTGATATAGCTGAAGGGATTGCTGATCAGGTGATTAGTTTCTTGCTACTCATATATTCTGAATAG 4902 41.39 MAAMEKLFVQIFERKKWIIDQAKHQTNLFDQHLASKLIIDGIVPPPWLHSSFLPSHISHFEEVNKNFISGVEFPRSPLETHRSCLNEGLVGREELQHRSNEEAGSLNDGFDVGIRPSVLPQCDTSDAGFALNCAPHIEMSPFSPQGREGGVSETYQDPTLSLARLHRSKSRQRALELRNSVKSARFQSRCENKNDSIAGGIMGSAISLLRADHEDASELAKPSSSCKGFVSAEEETNVCCEQKDISVCSDKITIVGSPGLQSSSINVGTSLNSSSKDEGLCVAGGSTQNSCQVKGQFDSPRPSSRKIEDCEEGSGYCRSQEYNFDNAEWSRLQCSSLDVDRTSCISPEDGRACPGSSKLQSDQAVQQLDLPKPSSGNIECREETVLEHCRSQECNLDNALQSGSQYSSLDVDDSLCIDTGTGRLLDLSKPSSGNVECCEETILGHCRSQECNLDIAQQSGSQCSSQDVDNSSYVDSEDGRSCPIGSSTVLCDQVKEQVDLSKSSSDNMECREEEILGHFKSQEHQFNNARQSGMQHSSLDADNSPCLSSEDGTLCHVVSSKRRSDQVNELLELSRPSLVNIECHKEGLGDCRTQDKNFGNNAEQSGLDKISSSPMMEVREKTSDKKPSTFLDDKRAVNEKEKCNSPLPMPLPQMQLDSVKEDESYKDASESHSEKRYEDRGYLNVNSLSSADKSLHGYEKITACSLLQSDEPAEQNISLKDGVSNVRVFHENVVEIPPVDTDEASVLVRDTETFRDLMVMAPCVPSAGERDSNLKQQLKNSGISQCEDSDSFEGCTGGFNGNHHYISTECQTAERLIELKTFCSVLKASSSHEKQRLVELQLENGIPASLGLRNEKLHIINRSPLDQKLMQEFDYEKPILEFQRLSFCEEDYPQPNVNISPEEMLLLEKEAHLMQGSEISPKLTVKEDLSRFGSYTRGTTLQNVMLESQSGDTKENLRFGGNELHVDTQKTEGEEENGKLTSCSLITRHIQTPHYLGVDKDTPALEGFLMQADDDQPCISVGGINRKHLGEHASISDLMESMDSATQGLINFDKLDLSKCMIERASILEKLCKSACTNSPLSSSSESFKLNKVSDLYHSLPNGLMESMDLKSNLLMNDQNKLLKDGSNFLNREVNCSPHGKSFSDCLQSFSSNSAGDVRKPFASPFGKLLDRNSLNSSSSGKRSNQNIELPCISEEAENTDEVDDEFSKDMGSKERVPLADITENDNVQVTVSEAATFADRLSLESLNTELSNTGTHTRTKENLGNQKSSKRKYLNEAVNHDILPGANGAKRVTRSSYNRFSRSDLSCKENSRKEGPRFSEKESKHKNIVSNVTSFIPLLQQREAPTILKGKRDIKVKAIEAAEAAKRLAEKKENERQMKKEALKLERARMEQENLRQIELEKKKKDEERKKKEEERKKKEADMAAKKRQREEEERKEKERKRMRVEEVRRRLREHGGKLRSDKENKEVKPQANDQKPRDRKGCKDVTDKLDKESGHGNFDKLSVNESKTTTSDAGRASSVVEDSQTSVGSLEAEAFENVMENRISETSEEQSYQISPYKASDDEDEEDDDGDDDIQNNKFVPSWASKDRLAVLFASQQKLNPEIIFPPKSFCDIAEGIADQVISFLLLIYSE 1633
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 85903641 85913839 + Tan0017673.1 Tan01g3197 740621

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g3197 1633 MobiDBLite consensus disorder prediction 659 678 - -
Tan01g3197 1633 Pfam Inner centromere protein, ARK binding region 1562 1617 IPR005635 -
Tan01g3197 1633 MobiDBLite consensus disorder prediction 1302 1323 - -
Tan01g3197 1633 MobiDBLite consensus disorder prediction 1501 1533 - -
Tan01g3197 1633 MobiDBLite consensus disorder prediction 461 480 - -
Tan01g3197 1633 MobiDBLite consensus disorder prediction 1387 1500 - -
Tan01g3197 1633 MobiDBLite consensus disorder prediction 1387 1582 - -
Tan01g3197 1633 MobiDBLite consensus disorder prediction 1542 1559 - -
Tan01g3197 1633 MobiDBLite consensus disorder prediction 1173 1193 - -
Tan01g3197 1633 PANTHER TROPONIN I 823 1618 IPR050875 -
Tan01g3197 1633 Coils Coil 1356 1456 - -
Tan01g3197 1633 MobiDBLite consensus disorder prediction 1173 1213 - -
Tan01g3197 1633 MobiDBLite consensus disorder prediction 590 678 - -
Tan01g3197 1633 MobiDBLite consensus disorder prediction 614 641 - -
Tan01g3197 1633 MobiDBLite consensus disorder prediction 1306 1323 - -
Tan01g3197 1633 MobiDBLite consensus disorder prediction 594 611 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g3197 - - - - 0.0
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g675 . . . . . . . Bma13g01118 . . Cma01g01073 Cma09g01015 Car01g00949 . Sed07g2762 Cpe06g00823 Cpe02g00825 Bhi09g01779 Tan01g3197 Cmetu01g1493 . . Mch11g1282 . . . . . . . . . . Cone14ag1224 Cone15ag1245 Lsi02g01822 . . . . Blo10g00866 . Bda12g00967 . . . . . Cmo01g01117 Cmo09g01018 . . . . . . . . . . . . . Cla09g02082 Cam09g2170 Cec09g2235 . . . . . . Chy01g01141 Cme01g00895
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006069 1 1 1 2 1 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 4 1 1 39