Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g3294 ATGGCCATCACCGGAGCCAAATGGTGGAATGAGCTCTCCATCTCCACGCTGCTTCTTCTCTCACTCTTCGCCGTCGTCATCCTCGCAGGAGACACCTCCTCCTTCAACCACCGCAAGATCTCCACCGTCCGAGCTTCCTCCTCCACTTCCAACTCCACCTACGCCGTCATCTTCGACGCCGGAAGCTCCGGCAGCCGCGTCCACGTCTTTCACTTCGATCGAAACCTCGATCTCCTCTTCATCGGCTCAGACATTGAGGTTTTCTCACAGATAAAGCCAGGGCTCAGTTCATACGCCGATAATCCTCAGAAAGCGGCAGATTCTCTAATTCCTTTACTTGAAAAAGCAGAAGCCGCAGTTCCTCAAAACCTCCAATCCGTGACGCCGATTCGCCTCGGGGCGACGGCAGGGCTTAGGTTTTTGGAAGGCGATAGATCTGAGAGGATTTTGGAAGCGGTTAGGGTTCTTCTGAAAACGAAGAGCGGATTCAAATACGAAGCGGATTCGGTTTCGATTCTTGATGGAAATCAAGAAGGTTCATATCAATGGTTGACAATAAACTATTTGCTGGAGAATTTGGGGAAGAAATATTGGAATACAGTGGGAGTAATTGATCTTGGTGGTGGCTCTGTTCAAATGGCATATGCACTTTCTGATGAAGATGCAGCAAACGCACCAATTTCTTCTGATGGAAACTCCAAATTTGTTCAAAATTTTTATCTCAAGGGTGCAAATTATAACCTCTACGTTCACAGTTATTTGCGTTACGGTTTACAAGCTGCCCGAGTAGAAATTTTGAAGGTCACCAATGGCCTTGGCAATCCTTGCATTTTAGCTGGCTATGAAGGAACGTACTCATACGGTGGAGAGGAGTACAAAGTATCAGCTCCTCGATCAGGGTCGAGCTTTAGCCGTTGTCGGAGCGTAATTTTAGAGGCACTCAAAATCAACAAATCATGTGGCTACAACGAGTGCTCATTTGATGGTATATGGACCGGCGGTGGAGGAGCTGGTGTGAATAATCTCTATGTTGCTTCCTTTTTCTTTGACAAGGCAGCTCAGGCGGGTTTCATCGATTCCAACAAAGCAGAGGCCATAGTGAAAGCCATTGATTTCAAGAGAGCAGCAAGGATTGCTTGTCAAACTAAGTTTGTGGATGCAAAGTCCAAATACCCCAATGTTTACTCAAGCGATTTGCAATTTGTGTGTTTGGATCTCGTTTACGAGTACGCACTTCTTGTCGATGGATTCGGTATTGATTCTCGAAAGAAGATAACATTGGTGAAGCAAGTGGCTTATCATGGTTCCCTTGCAGAGGCAGCATGGCCATTGGGCAATGCTGTTGCAGTCATCTCATCGCCAAACTCCAGAGGAGAAGAAGGACTGTTGTGTTGTTGA 1398 46.78 MAITGAKWWNELSISTLLLLSLFAVVILAGDTSSFNHRKISTVRASSSTSNSTYAVIFDAGSSGSRVHVFHFDRNLDLLFIGSDIEVFSQIKPGLSSYADNPQKAADSLIPLLEKAEAAVPQNLQSVTPIRLGATAGLRFLEGDRSERILEAVRVLLKTKSGFKYEADSVSILDGNQEGSYQWLTINYLLENLGKKYWNTVGVIDLGGGSVQMAYALSDEDAANAPISSDGNSKFVQNFYLKGANYNLYVHSYLRYGLQAARVEILKVTNGLGNPCILAGYEGTYSYGGEEYKVSAPRSGSSFSRCRSVILEALKINKSCGYNECSFDGIWTGGGGAGVNNLYVASFFFDKAAQAGFIDSNKAEAIVKAIDFKRAARIACQTKFVDAKSKYPNVYSSDLQFVCLDLVYEYALLVDGFGIDSRKKITLVKQVAYHGSLAEAAWPLGNAVAVISSPNSRGEEGLLCC 465
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 88503824 88522947 - Tan0008219.2 Tan01g3294 740718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g3294 465 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 173 188 IPR000407 GO:0016787(InterPro)
Tan01g3294 465 Pfam GDA1/CD39 (nucleoside phosphatase) family 48 453 IPR000407 GO:0016787(InterPro)
Tan01g3294 465 Gene3D - 54 447 - -
Tan01g3294 465 Gene3D Exopolyphosphatase. Domain 2 174 432 - -
Tan01g3294 465 FunFam Apyrase 1 174 432 - -
Tan01g3294 465 CDD NBD_sugar-kinase_HSP70_actin 56 215 - -
Tan01g3294 465 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 14 451 IPR000407 GO:0016787(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g3294 Tan-Chr1:88503824 Tan03g0642 Tan-Chr3:61814568 7.70E-146 dispersed
Tan01g3293 Tan-Chr1:88503824 Tan01g3294 Tan-Chr1:88503824 2.00E-258 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g3294 K14641 - gmx:100787491 510.76