Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan01g3335 | ATGCTTGGCGAGTCCACTACTTCCGTCTTGGGCGGCGGCGCCGGAGGGGACGCCTCCGTGCCGGAGACGACTCACCGCCACGATGGGTTCATCGGAGACGGCGGGGCAGGGGCGGCGGAGGATAATAATAACAATTCTGGTGAAGATGAGAGAGGGAGAAACGGCGGAGGAGACGATGGTGACCGGAGCTTCGGCGGAAACCGGTGGCCGAGACAAGAAACTTTGGCTCTCTTGAAAATACGGTCGGAAATGGACGTGGCTTTTCGAGATGCAAGCGTTAAAGGCCCCTTGTGGGAACAAGTTTCCAGGAAATTAAGGGAGCTTGGGTATCATCGAAGTGCAAAGAAATGCAAAGAGAAATTTGAGAATGTTTACAAATATCACAAAAGAACCAAAGAAGTTCGAAGTGGGAAACCAGATAGCAAAACTTACAAATTTTTTGAACAATTAGAAGCTCTTGAAAATCACCCTCCTCTCAATTTCCACTCCCATTTGTCTAAATCACCACCTCCCACAATGGCAGCTCCGCCTCCAACCACCCTCATTTCTCACATTCCTTCAACTACTGTTCCATCGACCACCACCACCACCACCGCCGTACCCCACTTGATGAACATTTCATTCTCTCAACCAAACCCCACAATTCACCTCCAATCCCCGCCCCCTCCCGCTCCGTTGCCATTGAATAACCCTACAAGCTTAGCCACCGTCGCTCCGCCTTTTCAAACCACCAACGTCTCTTTGGGGGCTGCGGGAACGGGGTTTCAGAACATTGATGCGGATCTCATCTCCAATTCGACGTCTGATGATGTCGACTCTTCGACGTCATCAGATGAAGCTTCGAGAAGGAGGAGGAGGAAGAGGAAATGGAAGGACTTTTTTGAGAGGTTGATGAGGGAAGTGATTCAAAAGCAAGAGGAAATGCAAAAGAGATTCTTGGAGGCAATTGAGAAGAGGGAGCAAGAGAGAGTTGTGAGAGAAGAAGCTTGGAGGTTGCAAGAAATGACCAAAATCAATAGAGAAAGAGAGATTTTAGCTCAAGAAAGATCAATGGCGGCTGCTAAAGACGCCGCCATTACAACCTTCCTCCAAAAAATAACAGAATCCCAACACAATAACAACAACTCCTCACAACCGTCGCCGTCGCCACCGCCACCGCCACCGCCACAACAACAACCAATCTCGACATCAAATCCAACACCGGTCGCACAACCACCGCCACCGCCGCCACCGCAAGCTTCCACATTGCAAGTTGTTGTTCCAAATTCCACCCCACAAAAATTGGTGACCAATAATGAATTGTTGCAAATGGAGATTACCAAAACTGATCACAATGGTGGTGAAAATTATAGTATGAGCCCAGCTTCAAGCTCATCAAGATGGCCAAAAGTGGAAGTTCAAGCACTTATACAATTAAGAACAAATCTTGAAGCTAAATATCAAGAAAATGGACCAAAAGGGCCATTGTGGGAAGAGATATCTTCAGCCATGAAGAGACTTGGGTACAATAGAAATGCAAAGAGGTGCAAAGAGAAATGGGAGAACATAAACAAATACTTCAAGAAAGTGAAGGAGAGTAAAAAAACAAGGCCTGAGGATTCCAAGACTTGCCCTTATTTTCACCAGCTTGATGCTTTGTACAAGGAGAAGAACAGCAGCAGCAGCAACAATAACAACGGCAACAGGCTCGATAACGTCGTAATCGGATCTTCGACACCGACTATGCCACATCAACAGCAGCCGTTGATGGTTCGGCCTGAGCAACAATGGCCTCCGCAGCAAGAGATCGTCCGGCCCGACTCAGGCAATGAAGAGATGGAGAGCGAACCAATGGATCGGGATGATAAAGATGACGACGACGATGACGATGACGAAGAGGATGAGGACGAGGGTGGCGGGAACTATGAGATTGTGGCAAGCAAGCCAGCTTCAGTGAGTGCAGCAGAGTGA | 1950 | 48.31 | MLGESTTSVLGGGAGGDASVPETTHRHDGFIGDGGAGAAEDNNNNSGEDERGRNGGGDDGDRSFGGNRWPRQETLALLKIRSEMDVAFRDASVKGPLWEQVSRKLRELGYHRSAKKCKEKFENVYKYHKRTKEVRSGKPDSKTYKFFEQLEALENHPPLNFHSHLSKSPPPTMAAPPPTTLISHIPSTTVPSTTTTTTAVPHLMNISFSQPNPTIHLQSPPPPAPLPLNNPTSLATVAPPFQTTNVSLGAAGTGFQNIDADLISNSTSDDVDSSTSSDEASRRRRRKRKWKDFFERLMREVIQKQEEMQKRFLEAIEKREQERVVREEAWRLQEMTKINREREILAQERSMAAAKDAAITTFLQKITESQHNNNNSSQPSPSPPPPPPPQQQPISTSNPTPVAQPPPPPPPQASTLQVVVPNSTPQKLVTNNELLQMEITKTDHNGGENYSMSPASSSSRWPKVEVQALIQLRTNLEAKYQENGPKGPLWEEISSAMKRLGYNRNAKRCKEKWENINKYFKKVKESKKTRPEDSKTCPYFHQLDALYKEKNSSSSNNNNGNRLDNVVIGSSTPTMPHQQQPLMVRPEQQWPPQQEIVRPDSGNEEMESEPMDRDDKDDDDDDDDEEDEDEGGGNYEIVASKPASVSAAE | 649 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 90917922 | 90921166 | + | Tan0019978.1 | Tan01g3335 | 740759 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan01g3335 | 649 | Gene3D | - | 69 | 130 | - | - | |
Tan01g3335 | 649 | Gene3D | - | 461 | 522 | - | - | |
Tan01g3335 | 649 | FunFam | Trihelix transcription factor GT-2 | 69 | 130 | - | - | |
Tan01g3335 | 649 | MobiDBLite | consensus disorder prediction | 1 | 68 | - | - | |
Tan01g3335 | 649 | MobiDBLite | consensus disorder prediction | 369 | 417 | - | - | |
Tan01g3335 | 649 | CDD | GT1 | 460 | 524 | - | - | |
Tan01g3335 | 649 | ProSiteProfiles | Myb-like domain profile. | 453 | 517 | IPR001005 | - | |
Tan01g3335 | 649 | MobiDBLite | consensus disorder prediction | 378 | 415 | - | - | |
Tan01g3335 | 649 | ProSiteProfiles | Myb-like domain profile. | 67 | 125 | IPR001005 | - | |
Tan01g3335 | 649 | MobiDBLite | consensus disorder prediction | 607 | 633 | - | - | |
Tan01g3335 | 649 | CDD | GT1 | 67 | 132 | - | - | |
Tan01g3335 | 649 | FunFam | Trihelix transcription factor GT-2 | 461 | 522 | - | - | |
Tan01g3335 | 649 | MobiDBLite | consensus disorder prediction | 263 | 287 | - | - | |
Tan01g3335 | 649 | MobiDBLite | consensus disorder prediction | 550 | 649 | - | - | |
Tan01g3335 | 649 | MobiDBLite | consensus disorder prediction | 550 | 587 | - | - | |
Tan01g3335 | 649 | Coils | Coil | 302 | 322 | - | - | |
Tan01g3335 | 649 | SMART | sant | 457 | 519 | IPR001005 | - | |
Tan01g3335 | 649 | SMART | sant | 65 | 127 | IPR001005 | - | |
Tan01g3335 | 649 | PANTHER | FI21293P1 | 43 | 614 | - | - | |
Tan01g3335 | 649 | MobiDBLite | consensus disorder prediction | 44 | 58 | - | - | |
Tan01g3335 | 649 | Pfam | Myb/SANT-like DNA-binding domain | 67 | 153 | IPR044822 | - | |
Tan01g3335 | 649 | Pfam | Myb/SANT-like DNA-binding domain | 459 | 546 | IPR044822 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan01g3335 | Tan-Chr1:90917922 | Tan07g0890 | Tan-Chr7:16316341 | 4.60E-88 | dispersed | |
Tan01g3335 | Tan-Chr1:90917922 | Tan01g3336 | Tan-Chr1:91008285 | 1.10E-100 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
26494 | PF13837 | Myb_DNA-bind_4 | 8.50E-22 | CL0123 | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan01g3335 | - | - | - | 0.0 |