Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan01g3336 | ATGGATGTCGACACCGGCGTGGCGGTGGCGCCGCCGGCCGAAGCTTTAGAATCCCATGAAGTTGGTGGCGGCGACAGCGGGTCGAATTCCGGTGAAGAAGATCATAAGGGGTCGTTGTTATTTGAAGATGGAGAGAAGAATTTTGGTGGAAACCGGTGGCCTCGACAAGAGACTTTGGCTTTGTTGAAGATAAGATCCGATATGGATGCAGTTTTTAGAGATGCAACTCATAAAGCTCCATTGTGGGATGAAGTTTCAAGGAAGTTGGGAGAGCTTGGATTCAATCGAACTCCAAAGAAATGCAAGGAGAAATTTGAGAATGTTTACAAATATCACAAAAGAACCAAAGAAGGTCGAAGTGGGAAATCCGATAATAGCAAAAAAGTTTATAGATTTTCTGATGAATTGGAGGCTTTTGGTATTCATCATCACAATCACATTTCATTTCCTTCTCACCACCACTTGCCGTTGCCGCTGCCGCTGCCGCCAGTCCCTCGGCCGACGACAACGCCGCCATCGCCGCCGCCGAAAATAATCACTTCTACTGTTCCATCGACCATGAATGCAACAAATTACAACAACTCCTCGCCTCCCAAATCCTCTAACCCTCTTTCCAATTTGCCAAACATGGCTGCTGCCAATGGGATGTTTTCGAGCTCCACGTCATCGTCGACGGCGTCGGAGGAAGATCCGTTTCGGAGCAGGAGGAAGAGGAGGAAGAAGAGGAAGTGGAGTGATTTCTTTGTGAGGTTGACAAAGGAGGTGATAGAGAAGCAAGAGGGGCTTCAACAAAAGTTCTTAGAAGCCTTGGAGAGAATAGAGAATCAAAGGAAATTGAGAGATGAAGCATGGAGAATGAAAGAGATGACAAGGATTAACCAAGAACATGAAGTTCTAGTCCAAGAGATGTCCATGGCTGCCGCGAAAGACGCCGCGGTGGTTGCGTTTTTGCAAAAACTAGCACCCCCATCTCCTTCTCCGCCGCCACCACCACCGTTGCAGAATAGCGAGAATGAAAAGTCGATGACCACAACTATTGCAAACCATCTTTCGACTCAGCCTCATAAGGGCGAGAATAATAATGGAAAGGTGAGCACCGGTGTAGGAAGCCCTTCGAGATGGCCGAAGGCGGAAGTAGAAGCATTGATAAGGCTTAGGACAGAATTGGAAATGAAGTATCAAGAGAATGGGCCAAAAGGGTTATTATGGGAAGAGATTTCAGCAGCCATGAGAGGGCTTGGATACAATAGAAGTTCAAAGAGATGCAAAGAGAAATGGGAAAACATAAACAAATACTTCAAAAAGGTGAAAGATAGCAACAAGAAGAGGCCAGAAGATTCCAAGACATGCCCCTACTTTCACCAATTGGATGCTCTATACAAAGAGAAAGAGAAAAACATGAGTTTTGATATCAATAGCCAAATGGAGCCATTGATGGTTGAACCAGAACAACAATGGCCACCACCTCCATTTCAGGCCAATCAAATGATGGGAAATTTACAAAGAATAAATGGTGAGGGAAATCAAGAGGAAGATGATGAAGAAGAAGAAGAAGAAGAAGATGATGATGGAGGAAGTAGCAGCACAGATGTTGAAGATTGA | 1602 | 45.26 | MDVDTGVAVAPPAEALESHEVGGGDSGSNSGEEDHKGSLLFEDGEKNFGGNRWPRQETLALLKIRSDMDAVFRDATHKAPLWDEVSRKLGELGFNRTPKKCKEKFENVYKYHKRTKEGRSGKSDNSKKVYRFSDELEAFGIHHHNHISFPSHHHLPLPLPLPPVPRPTTTPPSPPPKIITSTVPSTMNATNYNNSSPPKSSNPLSNLPNMAAANGMFSSSTSSSTASEEDPFRSRRKRRKKRKWSDFFVRLTKEVIEKQEGLQQKFLEALERIENQRKLRDEAWRMKEMTRINQEHEVLVQEMSMAAAKDAAVVAFLQKLAPPSPSPPPPPPLQNSENEKSMTTTIANHLSTQPHKGENNNGKVSTGVGSPSRWPKAEVEALIRLRTELEMKYQENGPKGLLWEEISAAMRGLGYNRSSKRCKEKWENINKYFKKVKDSNKKRPEDSKTCPYFHQLDALYKEKEKNMSFDINSQMEPLMVEPEQQWPPPPFQANQMMGNLQRINGEGNQEEDDEEEEEEEDDDGGSSSTDVED | 533 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 91008285 | 91010870 | - | Tan0006418.1 | Tan01g3336 | 740760 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan01g3336 | 533 | MobiDBLite | consensus disorder prediction | 321 | 335 | - | - | |
Tan01g3336 | 533 | Pfam | Myb/SANT-like DNA-binding domain | 51 | 131 | IPR044822 | - | |
Tan01g3336 | 533 | Pfam | Myb/SANT-like DNA-binding domain | 372 | 459 | IPR044822 | - | |
Tan01g3336 | 533 | MobiDBLite | consensus disorder prediction | 160 | 179 | - | - | |
Tan01g3336 | 533 | MobiDBLite | consensus disorder prediction | 508 | 533 | - | - | |
Tan01g3336 | 533 | MobiDBLite | consensus disorder prediction | 180 | 228 | - | - | |
Tan01g3336 | 533 | ProSiteProfiles | Myb-like domain profile. | 45 | 109 | IPR001005 | - | |
Tan01g3336 | 533 | MobiDBLite | consensus disorder prediction | 350 | 375 | - | - | |
Tan01g3336 | 533 | MobiDBLite | consensus disorder prediction | 320 | 339 | - | - | |
Tan01g3336 | 533 | MobiDBLite | consensus disorder prediction | 481 | 533 | - | - | |
Tan01g3336 | 533 | CDD | GT1 | 51 | 116 | - | - | |
Tan01g3336 | 533 | FunFam | Trihelix transcription factor GT-2 | 374 | 435 | - | - | |
Tan01g3336 | 533 | Coils | Coil | 500 | 520 | - | - | |
Tan01g3336 | 533 | FunFam | Trihelix transcription factor GT-2 | 53 | 114 | - | - | |
Tan01g3336 | 533 | PANTHER | FI21293P1 | 28 | 512 | - | - | |
Tan01g3336 | 533 | SMART | sant | 370 | 432 | IPR001005 | - | |
Tan01g3336 | 533 | SMART | sant | 49 | 111 | IPR001005 | - | |
Tan01g3336 | 533 | MobiDBLite | consensus disorder prediction | 1 | 52 | - | - | |
Tan01g3336 | 533 | MobiDBLite | consensus disorder prediction | 490 | 505 | - | - | |
Tan01g3336 | 533 | MobiDBLite | consensus disorder prediction | 160 | 239 | - | - | |
Tan01g3336 | 533 | ProSiteProfiles | Myb-like domain profile. | 372 | 430 | IPR001005 | - | |
Tan01g3336 | 533 | MobiDBLite | consensus disorder prediction | 350 | 368 | - | - | |
Tan01g3336 | 533 | Coils | Coil | 256 | 276 | - | - | |
Tan01g3336 | 533 | CDD | GT1 | 372 | 437 | - | - | |
Tan01g3336 | 533 | Gene3D | - | 53 | 114 | - | - | |
Tan01g3336 | 533 | Gene3D | - | 374 | 435 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan01g3336 | Tan-Chr1:91008285 | Tan07g0890 | Tan-Chr7:16316341 | 2.20E-88 | dispersed | |
Tan01g3335 | Tan-Chr1:90917922 | Tan01g3336 | Tan-Chr1:91008285 | 1.10E-100 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
26495 | PF13837 | Myb_DNA-bind_4 | 1.30E-22 | CL0123 | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan01g3336 | - | - | - | 0.0 |